prot_Ecto-sp13_S_contig8807.20292.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8807.20292.1
Unique Nameprot_Ecto-sp13_S_contig8807.20292.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1236
Homology
BLAST of mRNA_Ecto-sp13_S_contig8807.20292.1 vs. uniprot
Match: Q8QKU9_ESV1K (EsV-1-171 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKU9_ESV1K)

HSP 1 Score: 887 bits (2292), Expect = 4.920e-301
Identity = 731/1240 (58.95%), Postives = 839/1240 (67.66%), Query Frame = 0
Query:    1 MDTKVVLIVALIVAGAILFATATKGDSTKEKPARKWVSA-DEIALTANAIIGELDEEATEALPSDLKSNTEGLTLTDEEKTELFATLNSVTDSGVLGALGSASPLGASAMKNLVKTKNGIIQNTRRYEKRVENMKKVLAKTKHPIKKAKLVAEIKEAQRVVSRNNAALKNTIKEIEQLKVQQTEEEKKVVVGRGSSAKMTSLISQAKRLRVKYNALEKTLAQLNKFAENVKKKSKTGKIPVTIA----RKLEKKHKATKKAMDSVRKSGRMIEGKIKAEKRRIAAVKKQSLAKARETKRAHETEVVAKKLLEESEKKTAEKEAGVKKANAVFKREALEATRRAQKAQKMALAQKAHNEKVAEADDARKQYEEARAKKEAGALAKKKADLKRQKDRLRFEAARAKEAMXXXXXXXXXXXXXXXXXMKAAEAKQLEKAAQALKGAKNIKSEGMRKQMQAAIREKAADEQKKRHEAAKKMAAMAVQRQKSLREKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEKAKRDVAAXXXXXXXXXXEHMEARARLRKHKAQEAEKARKKQNAELEEGIEKISGMSSDSIDLSSLDKTVLLELKVLIEASGGHRILPAVIKIIQLKSNKEXXXXXXXXXXXXXXXXXXXXRPMTREERQKKHMMDFYNNVERITGIIPDGPETMVVLDMEVLEELLAYAKTFTTGRMATFSEYVEEIIFLQKLITIAKQNGVTMTHTMDPRRMGWDSAEIAGLAKIFEFLLESSTEMKNRNDILQMVRDIHRWKLAKIVAEREAAEEVRTKKQAEELEAIEKARVVQAEKDLANDAAKLEQEKQNLHTEIVRVDKAVSAEKQQVAAEHQKEVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEHSAESKLVELKQEQAEVENEQRAEAIEVVATIEAEISNTQDQAVVEALQQNLQEQKISHARVLEETAKARALEQQAVVEEAKALKEEIKKSAVSEIXXXXXXXXXXXXXXXXXXXXXKQDLIEAKEKVQEIEVEKVDLEGAIQTDLLEQQRHDVEEDKEIVEDTTVDDIVEHTVHPRASKEDRVTVSRKHNPNGSSFIKISVPSDMSPGESDTVSIFLSKEAGELLAQYHDIYKKIGEGGSLENVSAEDKKALASAGAEFKRIREQYVQQRKEKVLARREQLTFRMTN 1235
            M+T+V+LIVAL+VAGAIL     K + + E+P +K  S+ +EI+LTAN IIGELDEEA EALPSDLK N +GLTLTDE+KTELFA LNSVTDSGVLGALGS+SPLGASA  +LVKTKN I +  R +E R++ +K+ +AKTK+P  +AKL  +IK AQ   SRN+ ALK  +K+I +LK +  ++ K  VV   SSAK+ SL+SQ +RLRVKY AL K    L    + ++++ K  KI    A    R LE+K+KAT K++DS+RKSG MIEGKI AEKRRI AVKKQSL KAR+TKRAHETEV AKKLL+ESEKK+A  EAGVKKA +V  R+ LE  RRAQKAQKMA AQK H EKV+EAD AR++YE  + KK+A ALAK KA LK +K+ L  EAA      XXXXXXXXXXXXXXXXX                                              HEAAKKMAA+A +RQK   EK                             K +A     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                ALEKAKRDVAA          EHMEARARLRKHKA+EAEKARKK+ AELE+GIEKISGMSSDSIDLS LDKTVLLELKV IEAS GH ILPAVIK+I+LKS K XXXXXXXXXXXXXXXX    RPMT E+ ++    DF+ NV+RITGIIPDGP +MV LDMEVLEELLAY+KT TTGR+ATFS++VEEIIF +KLIT+AKQNGVT+T  M  R++ W SA I  L KI EFL   ++E +   + L +V+ +HR K  ++V EREAAEE R KKQAEEL+AIEKARV QAEKDLA  AAKLEQ++Q L TEIVRV+ AV+AEKQ+V AEHQK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    V+ + ESKLVE                                                  ARV                 EA ALKEEI+KS +S+I                     KQDLIEAKEKVQEIEVEKVDLEG +Q D             EIVEDT++DDIVE TVHPRASKED V  +RK NP+GSSFIK+ VPSDMSPGESD VSI LSKEAGELLAQYHDIYKKIGE GSLENVSAEDKK LASAGAEFKRIR QYV+QRKEKVLAR EQLT RMT+
Sbjct:    2 MNTRVILIVALVVAGAILLTKHRKKNGSTEEPFQKQFSSRNEISLTANVIIGELDEEAMEALPSDLKPNIDGLTLTDEDKTELFAILNSVTDSGVLGALGSSSPLGASARTDLVKTKNQITRKIRLFENRMKLLKEKMAKTKNPRSRAKLAGQIKSAQSESSRNDFALKAIVKKINRLKAKGKDKTKTNVVAEESSAKLKSLVSQKERLRVKYFALLKNRRALMNNVKALERQIKAKKISSKNASEWKRNLERKYKATTKSIDSIRKSGIMIEGKISAEKRRIVAVKKQSLEKARQTKRAHETEVAAKKLLQESEKKSAVTEAGVKKAKSVLNRQVLEVKRRAQKAQKMARAQKEHAEKVSEADRARREYEVVQEKKKATALAKGKAALKHKKESLTREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEAAKKMAAIAQKRQKRFLEKGRRLETKFQNDTAIIRRKEQEIARLEEMNKAKAVEQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALESQKEAEKIEAAAALEKAKRDVAAKKAHSAKKRHEHMEARARLRKHKAEEAEKARKKKVAELEQGIEKISGMSSDSIDLSGLDKTVLLELKVFIEASDGHHILPAVIKMIELKS-KXXXXXXXXXXXXXXXXXQNEDRPMTPEQIRE----DFFKNVQRITGIIPDGPGSMVALDMEVLEELLAYSKTLTTGRLATFSKHVEEIIFSKKLITVAKQNGVTITPGMHARQVTWSSANIVSLGKILEFL---NSEPRFAEEWLNVVQVVHRNKTVQLVLEREAAEEARAKKQAEELDAIEKARVAQAEKDLAKAAAKLEQDRQKLDTEIVRVNHAVTAEKQRVIAEHQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIQEVDAATESKLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARVXXXXXXXXXXXXXXXXXEANALKEEIEKSTISKIKEENTIAQEKLESAVETVEQEKQDLIEAKEKVQEIEVEKVDLEGTVQIDXXXXXXXXXXXXXEIVEDTSIDDIVEDTVHPRASKEDMVKTARKRNPDGSSFIKMGVPSDMSPGESDNVSILLSKEAGELLAQYHDIYKKIGENGSLENVSAEDKKVLASAGAEFKRIRGQYVEQRKEKVLARTEQLTLRMTD 1233          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8807.20292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QKU9_ESV1K4.920e-30158.95EsV-1-171 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 509..544
NoneNo IPR availableCOILSCoilCoilcoord: 243..263
NoneNo IPR availableCOILSCoilCoilcoord: 164..187
NoneNo IPR availableCOILSCoilCoilcoord: 198..232
NoneNo IPR availableCOILSCoilCoilcoord: 992..1012
NoneNo IPR availableCOILSCoilCoilcoord: 664..691
NoneNo IPR availableCOILSCoilCoilcoord: 1040..1088
NoneNo IPR availableCOILSCoilCoilcoord: 473..507
NoneNo IPR availableCOILSCoilCoilcoord: 899..989
NoneNo IPR availableCOILSCoilCoilcoord: 829..849
NoneNo IPR availableCOILSCoilCoilcoord: 856..890
NoneNo IPR availableCOILSCoilCoilcoord: 572..597
NoneNo IPR availableCOILSCoilCoilcoord: 600..625
NoneNo IPR availableCOILSCoilCoilcoord: 329..438
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..1235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..22
score: 0.522
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8807contigEcto-sp13_S_contig8807:2031..5738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8807.20292.1mRNA_Ecto-sp13_S_contig8807.20292.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8807 2031..5738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8807.20292.1 ID=prot_Ecto-sp13_S_contig8807.20292.1|Name=mRNA_Ecto-sp13_S_contig8807.20292.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1236bp
MDTKVVLIVALIVAGAILFATATKGDSTKEKPARKWVSADEIALTANAII
GELDEEATEALPSDLKSNTEGLTLTDEEKTELFATLNSVTDSGVLGALGS
ASPLGASAMKNLVKTKNGIIQNTRRYEKRVENMKKVLAKTKHPIKKAKLV
AEIKEAQRVVSRNNAALKNTIKEIEQLKVQQTEEEKKVVVGRGSSAKMTS
LISQAKRLRVKYNALEKTLAQLNKFAENVKKKSKTGKIPVTIARKLEKKH
KATKKAMDSVRKSGRMIEGKIKAEKRRIAAVKKQSLAKARETKRAHETEV
VAKKLLEESEKKTAEKEAGVKKANAVFKREALEATRRAQKAQKMALAQKA
HNEKVAEADDARKQYEEARAKKEAGALAKKKADLKRQKDRLRFEAARAKE
AMEDTRQKIRQREDATKAKMKAAEAKQLEKAAQALKGAKNIKSEGMRKQM
QAAIREKAADEQKKRHEAAKKMAAMAVQRQKSLREKERRLEEKFQKAAAD
IRRKEQDIARREEMEKVEAKDQAEKAAQVAADQKQRELDQKKRDQQARAL
KQKQLALERKKEADQAKAVAALEKAKRDVAAKKAESAKKRREHMEARARL
RKHKAQEAEKARKKQNAELEEGIEKISGMSSDSIDLSSLDKTVLLELKVL
IEASGGHRILPAVIKIIQLKSNKEEEEEEEEEEEMDDSDDDDEDRPMTRE
ERQKKHMMDFYNNVERITGIIPDGPETMVVLDMEVLEELLAYAKTFTTGR
MATFSEYVEEIIFLQKLITIAKQNGVTMTHTMDPRRMGWDSAEIAGLAKI
FEFLLESSTEMKNRNDILQMVRDIHRWKLAKIVAEREAAEEVRTKKQAEE
LEAIEKARVVQAEKDLANDAAKLEQEKQNLHTEIVRVDKAVSAEKQQVAA
EHQKEVETIAREHEKEKQVVVEEIKQELKETEEEIAVETREQIEEVEHSA
ESKLVELKQEQAEVENEQRAEAIEVVATIEAEISNTQDQAVVEALQQNLQ
EQKISHARVLEETAKARALEQQAVVEEAKALKEEIKKSAVSEIEEKKTVA
QENLESAVATIEQEKQDLIEAKEKVQEIEVEKVDLEGAIQTDLLEQQRHD
VEEDKEIVEDTTVDDIVEHTVHPRASKEDRVTVSRKHNPNGSSFIKISVP
SDMSPGESDTVSIFLSKEAGELLAQYHDIYKKIGEGGSLENVSAEDKKAL
ASAGAEFKRIREQYVQQRKEKVLARREQLTFRMTN*
back to top