mRNA_Ecto-sp13_S_contig8782.20255.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: D8LSZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSZ2_ECTSI) HSP 1 Score: 494 bits (1271), Expect = 7.420e-173 Identity = 265/311 (85.21%), Postives = 275/311 (88.42%), Query Frame = 1
Query: 289 MFVEPGNGAAAGTEGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSDGLRFVRSPSGTGASPLPSGKPEVSRAAXXXXXXXAYPTTVGASGDSNSRITPSGADDAGAVPGGPTQEADDVKSLPFVVFLRACNVFFCFQEFFEDIHTLFGSLAFRSDRRTSINSIAGGRGDGGTKARAAREVNLRILLDQLQVMKAEPRNHLRYIDVKSTEAAVRRGGLGDRATLSAFLACLLLHSDDVASALLEKPPMDGYTDRLEACLGLWSDGSGNREGGRASSPQSTPGDGG-ADAVVETSGRKKKGARKGSGAGRG 1218
MF EPGN AG +GGGFEQKDVVHLFGLVC DFPEEIVVRVARILS+G R+VRSP GTGASP+PS K EVS AA A PTTVG D+N RITPSGADDAGAV PTQEAD VKSLPF VFLRAC V+FCFQEFFEDIHTLFGSLAFRSDRR SI+S AGGRGDGGTK RAAREVNLRILLDQLQVMKAEPRNHLRYIDV+STE AVRRGGLG+RATL AFLACLLLHSDDVASALLEKPPMDGYTDRLEACLGLWSDGSGNR GGRASSPQSTPGDGG ADAVVETSGR+KKGARKGSGAGRG
Sbjct: 1 MFGEPGNVTTAGADGGGFEQKDVVHLFGLVCQDFPEEIVVRVARILSEGSRYVRSPPGTGASPIPSAKSEVSGAAAAAAAV-ASPTTVGVRSDNNCRITPSGADDAGAVADAPTQEADGVKSLPFAVFLRACIVYFCFQEFFEDIHTLFGSLAFRSDRRRSISSFAGGRGDGGTKERAAREVNLRILLDQLQVMKAEPRNHLRYIDVRSTEEAVRRGGLGERATLPAFLACLLLHSDDVASALLEKPPMDGYTDRLEACLGLWSDGSGNRGGGRASSPQSTPGDGGRADAVVETSGRRKKGARKGSGAGRG 310
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: A0A7S3I0Q3_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3I0Q3_9SPIT) HSP 1 Score: 85.5 bits (210), Expect = 1.080e-14 Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = 1
Query: 13 IPPPDLPFGTNAADSAAMDGIT--AQDFLENPELKVYVEDALRLVLAARPEKPLDLIRDYLESVLSQDNVVGREYAYVNATTRNRRAFVHAVHEMFVEPGNGAAAGTEGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSDGLRFVRSP 456
+PPP F + SAA D AQ++LE ++ +Y++DA++++L R E+PLDL+ +Y + L ++++ REYA+V+AT NR++F+ V ++F + D + LVC DFP +++ + L P
Sbjct: 38 VPPPRSIFSIKSKSSAAKDRFNQRAQEYLETYKMSIYLQDAIKIILERRDERPLDLLNEYFNTTLRGEHILLREYAFVSATQLNRKSFLQQVKKVFHSTPHYKI-------ITALDYHQMICLVCSDFPRNLIIETVKTLPTAASTANEP 180
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: A0A7S3CUL5_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CUL5_9SPIT) HSP 1 Score: 77.8 bits (190), Expect = 1.560e-12 Identity = 40/134 (29.85%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 34 FGTNAADSAAMDGIT--AQDFLENPELKVYVEDALRLVLAARPEKPLDLIRDYLESVLSQDNVVGREYAYVNATTRNRRAFVHAVHEMFVE-PGNGAAAGTEGGGFEQKDVVHLFGLVCPDFPEEIVVRVARIL 426
F T + A D + AQ++L++ ++ +Y++DA++++L R EKPLDL+ DY + L ++++ REYA+V+AT NR+ F+ + ++F P G D + L+C DFP +++ + +
Sbjct: 92 FSTKSKSQMAKDRFSQKAQEYLDSHKMSIYLQDAIKIILDRREEKPLDLLTDYFNTTLKGEHILLREYAFVSATQLNRKCFLQQIRKVFHSTPYYQIITGL--------DYHQMICLICSDFPRTLMIETIKTI 217
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: A0A7S3WTD8_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=2 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WTD8_9SPIT) HSP 1 Score: 77.8 bits (190), Expect = 2.490e-12 Identity = 40/121 (33.06%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 73 ITAQDFLENPELKVYVEDALRLVLAARPEKPLDLIRDYLESVLSQDNVVGREYAYVNATTRNRRAFVHAVHEMFVE-PGNGAAAGTEGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSD 432
++ Q+++E +L +Y++D L+L R E+P++ I DY S+++ +V+ R++ YVNA+ RNR AFV E F E P + E + +L ++CPDFP E+V A + +
Sbjct: 18 LSPQEYMEKHDLLLYLQDVTSLLLQVRTERPIEFIADYFSSIMAGAHVIMRDFQYVNASERNRWAFVRLSLESFAEFPSDSPITSIE--------LANLLRMLCPDFPLELVENTALLCGE 130
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: A0A7S3IWV1_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3IWV1_9SPIT) HSP 1 Score: 76.3 bits (186), Expect = 4.520e-12 Identity = 36/117 (30.77%), Postives = 69/117 (58.97%), Query Frame = 1
Query: 79 AQDFLENPELKVYVEDALRLVLAARPEKPLDLIRDYLESVLSQDNVVGREYAYVNATTRNRRAFVHAVHEMFVE-PGNGAAAGTEGGGFEQKDVVHLFGLVCPDFPEEIVVRVARIL 426
AQ++L++ ++ +Y++DA++++L + EKPLDL+ DY + L ++++ REYA+V+AT NR+ F+ + ++F P G D + L+C DFP +++ + L
Sbjct: 101 AQEYLDSHKMSIYLQDAIKIILDRKEEKPLDLLTDYFNTTLKGEHILLREYAFVSATQLNRKCFLQQIRKVFHSTPYYHTITGL--------DYHQMICLICSDFPRNLMIETIKTL 209
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: A0A7S0M8G9_9CRYP (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M8G9_9CRYP) HSP 1 Score: 71.6 bits (174), Expect = 3.990e-11 Identity = 40/121 (33.06%), Postives = 64/121 (52.89%), Query Frame = 1
Query: 73 ITAQDFLENPELKVYVEDALRLVLAARPEKPLDLIRDYLESVLSQDNVVGREYAYVNATTRNRRAFVHAVHEMFVEPGNGAAAGTEGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSDG 435
+T Q +L+ + +Y+EDA+ LVL R ++PLD I Y SVL +V+ RE++++NAT RNR AF+ + + G +A +D L ++CPDF + L +G
Sbjct: 13 LTPQQYLDRYHIPLYLEDAISLVLETRDDRPLDAIHKYFNSVLQGSHVLLREFSFINATPRNRLAFIRLFVDTYCSFGPDSA-------ITFQDHWQLTTVLCPDFSQAFHNSALSTLQEG 126
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: J9IS68_9SPIT (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IS68_9SPIT) HSP 1 Score: 70.5 bits (171), Expect = 6.700e-10 Identity = 34/112 (30.36%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 91 LENPELKVYVEDALRLVLAARPEKPLDLIRDYLESVLSQDNVVGREYAYVNATTRNRRAFVHAVHEMFVEPGNGAAAGTEGGGFEQKDVVHLFGLVCPDFPEEIVVRVARIL 426
+E+ ++ +Y++DA++++L R +KPLDL+ +Y + L ++++ REYA+V+AT NR+ F+ V ++F D + LVC DFP ++V + L
Sbjct: 1 MESHKMSIYLQDAIKIILDRREDKPLDLLNEYFNTTLKGEHILLREYAFVSATPLNRKCFLQQVKKVFHSTPYYKV-------ISALDYHQMLCLVCSDFPRSLMVETVKTL 105
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: A0A1Y1Z716_9FUNG (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y1Z716_9FUNG) HSP 1 Score: 69.7 bits (169), Expect = 7.730e-10 Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 85 DFLENPELKVYVEDALRLVLAARPEKPLDLIRDYLESVLSQDNVVGREYAYVNATTRNRRAFVHAVHEMF 294
D+LE E+ VY +D + +L +PEKPL ++ Y ESV + NV+ REY Y+ +T RN+ F+H HE F
Sbjct: 2 DYLEKHEIPVYFQDIVTNLLIKKPEKPLQILNSYFESVANGTNVLLREYEYIISTKRNKAYFIHYFHESF 71
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: A0A1Y1XGV7_9FUNG (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XGV7_9FUNG) HSP 1 Score: 69.3 bits (168), Expect = 1.060e-9 Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 85 DFLENPELKVYVEDALRLVLAARPEKPLDLIRDYLESVLSQDNVVGREYAYVNATTRNRRAFVHAVHEMF 294
D+LE EL VY +D + +L +PEKPL ++ Y ESV + NV+ REY Y+ +T RN+ F+H +E F
Sbjct: 2 DYLEKHELPVYFQDIITNILIKKPEKPLQILNSYFESVTNGTNVLLREYEYIISTKRNKAYFIHYFYESF 71
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Match: A0A0G4IJU2_PLABS (Centriolar satellite-associated tubulin polyglutamylase complex regulator 1 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJU2_PLABS) HSP 1 Score: 68.2 bits (165), Expect = 4.130e-9 Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 1
Query: 73 ITAQDFLENPELKVYVEDALRLVLAARPEKPLDLIRDYLESVLSQDNVVGREYAYVNATTRNRRAFVHAVHEMFV-----EPGNGAAAGTEGGGFEQKDVVHLFGLVCPDFPEEIVVRVARILSDGLRFVRSPSGTGASPLPSGKP 495
++A ++L + YV+DA+RL+ + PLD + Y +VLS DNV+ R +AYV AT RNRR+F+ V + F EP A+ + L L+CPD+P + V RI G R+P+ + +P P
Sbjct: 24 MSADEYLAAHNVVDYVDDAIRLLAESGDGAPLDFLAAYFTNVLSGDNVIFRNFAYVQATPRNRRSFIRHVRDTFQRFDANEPTTVAS------------LHQLLCLLCPDYPIDYVRCAYRI---GAVRQRAPADDDDAQVPGALP 154 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8782.20255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8782.20255.1 >prot_Ecto-sp13_S_contig8782.20255.1 ID=prot_Ecto-sp13_S_contig8782.20255.1|Name=mRNA_Ecto-sp13_S_contig8782.20255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=407bp MAHCIPPPDLPFGTNAADSAAMDGITAQDFLENPELKVYVEDALRLVLAAback to top mRNA from alignment at Ecto-sp13_S_contig8782:999..6373+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8782.20255.1 ID=mRNA_Ecto-sp13_S_contig8782.20255.1|Name=mRNA_Ecto-sp13_S_contig8782.20255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5375bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8782:999..6373+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8782:999..6373+ >mRNA_Ecto-sp13_S_contig8782.20255.1 ID=mRNA_Ecto-sp13_S_contig8782.20255.1|Name=mRNA_Ecto-sp13_S_contig8782.20255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1221bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8782:999..6373+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |