prot_Ecto-sp13_S_contig87560.20231.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig87560.20231.1
Unique Nameprot_Ecto-sp13_S_contig87560.20231.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length60
Homology
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: UPI00142193D9 (hypothetical protein n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00142193D9)

HSP 1 Score: 117 bits (294), Expect = 1.840e-33
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0
Query:    1 AEIRGHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDHCYALFCLLN 59
            AEIRGHRIPKRRFTRWALYYFILYI LPVLAVSLLADA+LYFLFTRFTDHCYALFCLLN
Sbjct:   16 AEIRGHRIPKRRFTRWALYYFILYIVLPVLAVSLLADAILYFLFTRFTDHCYALFCLLN 74          
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: A0A545TTJ6_9PROT (Uncharacterized protein n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TTJ6_9PROT)

HSP 1 Score: 110 bits (275), Expect = 1.380e-30
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 AEIRGHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDHCYALFCLLN 59
            AEIRGHRIPKRRFTRWALYYF+LYI LPVL+VSLLADA+LYFLFTRFT HCYALFCL N
Sbjct:   14 AEIRGHRIPKRRFTRWALYYFMLYIVLPVLSVSLLADALLYFLFTRFTGHCYALFCLFN 72          
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: A0A7C7PSD8_9PROT (Uncharacterized protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7PSD8_9PROT)

HSP 1 Score: 88.6 bits (218), Expect = 6.890e-22
Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    2 EIRGHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDHCYALFCL 57
            EIRGHRIPKRRFT WALYY +LY+GLP++ + LL DAVLYF+FT     CYALFCL
Sbjct:   15 EIRGHRIPKRRFTGWALYYLLLYVGLPIVVLGLLVDAVLYFVFTGLLGRCYALFCL 70          
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: A0A843RFR1_9PROT (Uncharacterized protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RFR1_9PROT)

HSP 1 Score: 68.2 bits (165), Expect = 7.310e-14
Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    5 GHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDHCYALFCLLN 59
            G  +P+RR TRWA YYF+LY+ LPVLA+ +LAD +LY + +   D C+ALFCLL 
Sbjct:   13 GQVVPRRRLTRWAAYYFLLYVCLPVLALGVLADGLLYLVSSVLFDRCHALFCLLG 67          
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: A0A2E6Q701_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6Q701_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 2.150e-13
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    3 IRGHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDHCYALFCL 57
            ++GH +P  RFTRWA  YF  YI LP+LA+ L  D VLY LF R+ D CYAL CL
Sbjct:   12 VKGHDLPGPRFTRWAWIYFGFYIALPILALGLALDIVLYVLFERWFDSCYALLCL 66          
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: UPI0018732258 (hypothetical protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018732258)

HSP 1 Score: 67.0 bits (162), Expect = 2.310e-13
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    5 GHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDHCYALFCL 57
            GH IP+RRFTRWA++YF+LY  LPVL + L  D  LY +F+     CYALFCL
Sbjct:   17 GHVIPRRRFTRWAVFYFLLYFCLPVLLLGLAIDLALYAVFSGLFGRCYALFCL 69          
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: A0A2E7R7T3_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7R7T3_9PROT)

HSP 1 Score: 62.4 bits (150), Expect = 1.520e-11
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 AEIRGHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDHCYALFCLLN 59
            + ++G  +P  RFTRWA  YF+ Y+  P+LA+ L++D VLY++F ++   CYAL CL +
Sbjct:   12 SSVKGIYLPGPRFTRWAWIYFVAYVAAPILAIGLVSDLVLYYIFDQWFGACYALLCLFD 70          
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: UPI0003FAE348 (hypothetical protein n=2 Tax=Nisaea TaxID=390876 RepID=UPI0003FAE348)

HSP 1 Score: 60.8 bits (146), Expect = 6.020e-11
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    3 IRGHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTR-FTDHCYALFCLL 58
            I GHRIP RRFTRWA  YF+ ++GLP+L  +LL D + Y L  + F   CY L CLL
Sbjct:   13 IHGHRIPGRRFTRWAALYFMGFVGLPILGFTLLLDLIGYLLAVKLFGASCYGLLCLL 69          
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: UPI0013FDB3F0 (hypothetical protein n=1 Tax=Paremcibacter congregatus TaxID=2043170 RepID=UPI0013FDB3F0)

HSP 1 Score: 54.7 bits (130), Expect = 1.210e-8
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    5 GHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDHCYALFCLLN 59
            GH I   R T+WA YY + YIGLP+  +    D +L+F+F    D CY +FCL+N
Sbjct:    2 GHEISAPRPTKWAYYYILKYIGLPLCMILTGMDIILFFVFKYGFDSCYGVFCLIN 56          
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Match: A0A3B0RQV5_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0RQV5_9ZZZZ)

HSP 1 Score: 54.3 bits (129), Expect = 2.220e-8
Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 0
Query:    2 EIRGHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDHCYALFCLLN 59
             + GH I   + TRWAL+Y + Y+GLP+  +    D +L+F+F    + CY  FCLLN
Sbjct:   10 NVMGHEIAAPKPTRWALFYILKYVGLPICLLLTGLDIILFFIFKYGFNSCYGFFCLLN 67          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig87560.20231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
UPI00142193D91.840e-3396.61hypothetical protein n=1 Tax=Pelagibius litoralis ... [more]
A0A545TTJ6_9PROT1.380e-3089.83Uncharacterized protein n=1 Tax=Denitrobaculum tri... [more]
A0A7C7PSD8_9PROT6.890e-2271.43Uncharacterized protein n=1 Tax=Kiloniellaceae bac... [more]
A0A843RFR1_9PROT7.310e-1456.36Uncharacterized protein n=1 Tax=Kiloniellaceae bac... [more]
A0A2E6Q701_9PROT2.150e-1358.18Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
UPI00187322582.310e-1358.49hypothetical protein n=1 Tax=Pelagibius sp. NBU259... [more]
A0A2E7R7T3_9PROT1.520e-1144.07Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
UPI0003FAE3486.020e-1154.39hypothetical protein n=2 Tax=Nisaea TaxID=390876 R... [more]
UPI0013FDB3F01.210e-845.45hypothetical protein n=1 Tax=Paremcibacter congreg... [more]
A0A3B0RQV5_9ZZZZ2.220e-841.38Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..59
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig87560contigEcto-sp13_S_contig87560:143..322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig87560.20231.1mRNA_Ecto-sp13_S_contig87560.20231.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig87560 143..322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig87560.20231.1 ID=prot_Ecto-sp13_S_contig87560.20231.1|Name=mRNA_Ecto-sp13_S_contig87560.20231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
AEIRGHRIPKRRFTRWALYYFILYIGLPVLAVSLLADAVLYFLFTRFTDH
CYALFCLLN*
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