prot_Ecto-sp13_S_contig8740.20209.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8740.20209.1
Unique Nameprot_Ecto-sp13_S_contig8740.20209.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length187
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8740.20209.1 vs. uniprot
Match: D8LKD9_ECTSI (MABP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD9_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 3.200e-98
Identity = 162/181 (89.50%), Postives = 166/181 (91.71%), Query Frame = 0 
Query:    1 VEIAEEAREAFRRSRMTETGPHGPLLATTPGIMAIPTWDTYTPMVVKGGGREASPWARTPDMDRAGGSRASFDFESSSSRAGSPRAPSSNGDDAGTDLDHPLPAPSPLGREDVHDFVTELVQEVIGSKRAHVSAFVTLAALCKMATGILRTLSDGELVARDLGNKVRGSDPFVKSQRIFLP 181
            VEIAEEAREAFRRSRMT TGPHGPLLATTPGIMAIPTWDTYTPMVVKGGGREA+PWARTPDMDRAGGSRASFDFESS SRAGSPRAPSSNGDD G  LDHPLPAPSPLGREDVHDFVTELVQEVIGSKRAHVSAFVTLAALCKMATGILRTLSDGELVARDLGNK    D F   ++ + P
Sbjct:  761 VEIAEEAREAFRRSRMTGTGPHGPLLATTPGIMAIPTWDTYTPMVVKGGGREAAPWARTPDMDRAGGSRASFDFESSPSRAGSPRAPSSNGDDGGMVLDHPLPAPSPLGREDVHDFVTELVQEVIGSKRAHVSAFVTLAALCKMATGILRTLSDGELVARDLGNKKSTFDNFKADEKSWHP 941
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8740.20209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKD9_ECTSI3.200e-9889.50MABP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8740contigEcto-sp13_S_contig8740:2159..5183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8740.20209.1mRNA_Ecto-sp13_S_contig8740.20209.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8740 2159..5183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8740.20209.1 ID=prot_Ecto-sp13_S_contig8740.20209.1|Name=mRNA_Ecto-sp13_S_contig8740.20209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp
VEIAEEAREAFRRSRMTETGPHGPLLATTPGIMAIPTWDTYTPMVVKGGG
REASPWARTPDMDRAGGSRASFDFESSSSRAGSPRAPSSNGDDAGTDLDH
PLPAPSPLGREDVHDFVTELVQEVIGSKRAHVSAFVTLAALCKMATGILR
TLSDGELVARDLGNKVRGSDPFVKSQRIFLPWEVVQ*
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