prot_Ecto-sp13_S_contig8740.20208.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8740.20208.1
Unique Nameprot_Ecto-sp13_S_contig8740.20208.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8740.20208.1 vs. uniprot
Match: A0A6H5KWN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWN7_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 2.440e-66
Identity = 104/111 (93.69%), Postives = 106/111 (95.50%), Query Frame = 0 
Query:    1 GAGLGGVRGGSGGRTVLDFAIEVMCDSLDHVAEDRFPIALEFFEALVRTSEGRLGPLALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNRAFSALKDLLRLVCGQA 111
            GAGLGGV G S GRT+LDFAIEV+CDSLDHVAEDRFPIALEFFEALVR SEGRLGPLALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNRAFSALK LLRLVCGQA
Sbjct:   23 GAGLGGVTGASCGRTLLDFAIEVICDSLDHVAEDRFPIALEFFEALVRISEGRLGPLALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNRAFSALKYLLRLVCGQA 133
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BLAST of mRNA_Ecto-sp13_S_contig8740.20208.1 vs. uniprot
Match: D8LKD9_ECTSI (MABP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD9_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 5.440e-62
Identity = 105/110 (95.45%), Postives = 106/110 (96.36%), Query Frame = 0 
Query:    1 GAGLGGVRGGSGGRTVLDFAIEVMCDSLDHVAEDRFPIALEFFEALVRTSEGRLGPLALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNRAFSALKDLLRLVCGQ 110
            GAGLGGV G SGGRT+LDFAIEVMCDSLDHV EDRFPIALEFFEALVRTSEGRLGPLALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDN AFSALKDLLRLVCGQ
Sbjct:  651 GAGLGGVTGASGGRTLLDFAIEVMCDSLDHVTEDRFPIALEFFEALVRTSEGRLGPLALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNPAFSALKDLLRLVCGQ 760
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8740.20208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWN7_9PHAE2.440e-6693.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKD9_ECTSI5.440e-6295.45MABP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8740contigEcto-sp13_S_contig8740:1..1823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8740.20208.1mRNA_Ecto-sp13_S_contig8740.20208.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8740 1..1824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8740.20208.1 ID=prot_Ecto-sp13_S_contig8740.20208.1|Name=mRNA_Ecto-sp13_S_contig8740.20208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
GAGLGGVRGGSGGRTVLDFAIEVMCDSLDHVAEDRFPIALEFFEALVRTS
EGRLGPLALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNRAFSAL
KDLLRLVCGQA
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