mRNA_Ecto-sp13_S_contig8723.20189.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8723.20189.1
Unique NamemRNA_Ecto-sp13_S_contig8723.20189.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: D7FW08_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW08_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 2.420e-149
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 1 
Query:    1 EQGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT 669
            ++GSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT
Sbjct:   29 KRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT 251
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: A0A6S9E6K7_HETAK (Proteasome subunit alpha type n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E6K7_HETAK)

HSP 1 Score: 337 bits (864), Expect = 3.580e-113
Identity = 169/224 (75.45%), Postives = 196/224 (87.50%), Query Frame = 1 
Query:    1 EQGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEAS-AGDVQMT 669
            ++GSSVV ++GKDCV+LGVER++TAKLQD RT+RKI K+D+H+TLAFAGLTADARVLV+KARLECQSYRLTCEDAPS+EYVARF+ARTQQ+YTQRGGMRPFGVS +LAG   DG PQ+YQTDPAGTYSAWK N IGG NS +M+EFLEKNW  DMD  AAKKL +K LLEVVDSGAKNME+ +VR G+ NEMMTEE M AVAAE+EAEAEEAK  + AG+ + T
Sbjct:   27 KRGSSVVGIRGKDCVILGVERKSTAKLQDSRTVRKICKVDNHLTLAFAGLTADARVLVNKARLECQSYRLTCEDAPSVEYVARFVARTQQKYTQRGGMRPFGVSVMLAGHGVDGAPQLYQTDPAGTYSAWKGNCIGGKNSKSMQEFLEKNWEEDMDAPAAKKLAIKCLLEVVDSGAKNMEVCVVRRGQPNEMMTEEAMSAVAAEIEAEAEEAKAGTGAGEEKST 250
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: A0A835Z7L7_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L7_9STRA)

HSP 1 Score: 318 bits (815), Expect = 1.120e-105
Identity = 165/225 (73.33%), Postives = 192/225 (85.33%), Query Frame = 1 
Query:    1 EQGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWAND--MDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT 669
            ++GSSVV V+  D +V+GVERRATAKLQDPRTIRKIVK+D+H+TLAFAGLTADARVL+DKARLE QSYRLTCEDAPS+EY+ARFIARTQQ+YTQRGGMRPFGVS +LAGF  DG PQ+YQTDPAGT+SAWKANAIGG +S NMREFLEKN+  +  +DE AA KLC+K LLEVVDSGAKNMEI ++R     E M++  M AV A++EAEAEEAK+ASAG    T
Sbjct:   29 KRGSSVVGVRAADMLVVGVERRATAKLQDPRTIRKIVKVDAHLTLAFAGLTADARVLIDKARLEAQSYRLTCEDAPSLEYMARFIARTQQKYTQRGGMRPFGVSCMLAGFGTDGQPQLYQTDPAGTHSAWKANAIGGKSSKNMREFLEKNYPTEGGLDEAAAVKLCIKTLLEVVDSGAKNMEICLIRRDTPVETMSDTDMAAVVAQIEAEAEEAKKASAGSSMET 253
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: W7TRL4_9STRA (Proteasome subunit alpha type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL4_9STRA)

HSP 1 Score: 298 bits (763), Expect = 8.630e-98
Identity = 151/219 (68.95%), Postives = 187/219 (85.39%), Query Frame = 1 
Query:    1 EQGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKE-ASAG 654
            ++GSS V V+GK  V+LGVERRATAKLQDPRTI+KI KID H+TLAFAGLTADARVLV+KARLECQSYRLT EDAP++EYVAR+IARTQQ+YTQRGG+RPFGVS ++AG + DG+  +YQTDPAGTYSAWKA A+GG NS+NM+E+LEK WA+D++E  A +L +K LLEVVDSGAKNME+A++  G+   M+ E  + A++A +EAE EEAK+ ASAG
Sbjct:   29 KRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAG 247
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: A0A7S2F6I3_9STRA (Proteasome subunit alpha type n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F6I3_9STRA)

HSP 1 Score: 297 bits (761), Expect = 2.510e-97
Identity = 150/216 (69.44%), Postives = 179/216 (82.87%), Query Frame = 1 
Query:    1 EQGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEAS 648
            ++ S+VV V G++ VV+GVER+A AKLQ+ RTIRKIVK+DSH TLAFAGLTADARVL++KAR ECQSYRLTCEDAPS+EY+ARFIA+TQQRYTQRGG+RPFGVSSILAGF  DG+P IYQ DP+GTY AWKANAIGG N   MREFLEK W  D++E  A KL +KALLEVVDSG+KNME+ +VR G   E + +E + A+  E+EAE EEAK A+
Sbjct:   41 KKASAVVAVTGENVVVIGVERKAIAKLQESRTIRKIVKLDSHATLAFAGLTADARVLIEKARTECQSYRLTCEDAPSLEYIARFIAKTQQRYTQRGGVRPFGVSSILAGFHTDGSPSIYQIDPSGTYFAWKANAIGGRNFKPMREFLEKEWVPDLEEAQALKLTVKALLEVVDSGSKNMEVVVVRRGAGPETLDDEALTAIVTEVEAEQEEAKVAA 256
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: A0A7S2RQS1_9STRA (Proteasome subunit alpha type n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQS1_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.140e-96
Identity = 146/213 (68.54%), Postives = 175/213 (82.16%), Query Frame = 1 
Query:    1 EQGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAK 639
            ++ S+VV V+  D V+LGVER+  AKLQDPRTIRKIVK+D+H TLAFAGL ADARVL++K R+ECQSYRLTCEDAPS+EY+ARFIARTQQRYTQRGG+RPFGVSSILAGF+ DG PQIYQ DP+GTY  WKANAIGG N   MREFLEK W   + +  A KL +KALLEVVDSG+KNME+ ++R G+    M++E +QAV  ++EAE EEAK
Sbjct:   28 KKASAVVAVRAADTVILGVERKTIAKLQDPRTIRKIVKLDTHATLAFAGLNADARVLIEKTRIECQSYRLTCEDAPSLEYIARFIARTQQRYTQRGGVRPFGVSSILAGFNTDGAPQIYQIDPSGTYFGWKANAIGGRNFKGMREFLEKEWQEGLSQAEATKLTVKALLEVVDSGSKNMELVVIRRGEPAATMSDESVQAVVDQVEAEMEEAK 240
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: A0A7S2EX89_TRICV (Proteasome subunit alpha type n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX89_TRICV)

HSP 1 Score: 290 bits (741), Expect = 2.200e-94
Identity = 151/228 (66.23%), Postives = 180/228 (78.95%), Query Frame = 1 
Query:    4 QGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFS---------QDGT--PQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAG 654
            +GS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D   TLAFAGLTADARVLV+KAR+ECQSYRLTCEDAPS+EYVAR++ARTQQ+YTQRGG+RPFG++++LAGFS         +DG   P +YQTDPAGT+S+WKA  IGG N+ ++REFLEKN+ + MDEG   KL ++ALLEVVDSGAKNMEI +VR G   E M E  + AV  E+EAE EE K  S G
Sbjct:   28 RGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLVNKARVECQSYRLTCEDAPSVEYVARYLARTQQKYTQRGGVRPFGIATLLAGFSDPVQGKEDEEDGGSGPVLYQTDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEDGMDEGGCVKLSVRALLEVVDSGAKNMEICVVRRGGVRETMEESAVDAVVKEIEAEQEEGKRGSTG 255
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: A0A7S1FT14_9STRA (Proteasome subunit alpha type n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FT14_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.150e-93
Identity = 144/215 (66.98%), Postives = 181/215 (84.19%), Query Frame = 1 
Query:    4 QGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEAS 648
            +GS+ V ++  D V+L VERRATA+LQD RTIRKIV +D H+ LAFAGLTADARVLV+KAR+ECQSYRLTCEDAPSIEY+AR+IARTQQ+YTQRGG+RPFG++++LAGFSQ G+P +YQTDPAGTYS+WKANA+GG N+ +MREFLEKN  + M E  A KL +KALLEVVDSGAKNMEI++ R   ++ ++ EE++  +  E+EAEAEE+K  S
Sbjct:   28 RGSATVGIRASDAVILAVERRATARLQDSRTIRKIVSVDDHVRLAFAGLTADARVLVNKARVECQSYRLTCEDAPSIEYIARYIARTQQKYTQRGGVRPFGITTLLAGFSQSGSPCLYQTDPAGTYSSWKANAVGGRNAKSMREFLEKNCDDSMSETDAVKLAVKALLEVVDSGAKNMEISVSR-KNSSVILEEEVVDKIVKEIEAEAEESKTGS 241
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: A0A6U2BRH1_9STRA (Proteasome subunit alpha type n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U2BRH1_9STRA)

HSP 1 Score: 283 bits (725), Expect = 4.930e-92
Identity = 145/221 (65.61%), Postives = 176/221 (79.64%), Query Frame = 1 
Query:    4 QGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQ------DGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEAS 648
            +GS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D   TLAFAGLTADARVL++K R+E QSYRLTCEDAPS+EY+AR+IARTQQ+YTQRGG+RPFG++++LAGFS       D  P +YQTDPAGT+S+WKA  IGG N+ ++REFLEKN+ +DM+E A  KL ++ALLEVVDSGAKNMEI +VR G   EMM E  +  +  E+E EAEE K  S
Sbjct:   28 RGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLINKTRVEAQSYRLTCEDAPSVEYMARYIARTQQKYTQRGGVRPFGIATLLAGFSDPEHGKSDAKPVLYQTDPAGTHSSWKAQVIGGRNAKSLREFLEKNYEDDMEEDACIKLGIRALLEVVDSGAKNMEICVVRAGGKREMMEESGVDKIVKEIEEEAEEGKRGS 248
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BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Match: B8BR42_THAPS (Proteasome subunit alpha type n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BR42_THAPS)

HSP 1 Score: 283 bits (723), Expect = 8.100e-92
Identity = 138/217 (63.59%), Postives = 175/217 (80.65%), Query Frame = 1 
Query:    4 QGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAG 654
            +GS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D    LAFAGLTADARVL++K R E QSYRLTCEDAPS+EY+AR+IARTQQ+YTQRGG+RPFG++++LAGFS++G+P +YQTDPAGT+S WKA  IGG N+ ++REFLEKNW   ++E  A ++ ++ALLEVVDSGAKNMEI +VR G    ++ E+ +  +   +EAEAEE K +  G
Sbjct:   28 RGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVSVDERSVLAFAGLTADARVLINKTRTEAQSYRLTCEDAPSVEYLARYIARTQQKYTQRGGVRPFGIATLLAGFSEEGSPVLYQTDPAGTHSEWKAQVIGGRNAKSLREFLEKNWEEGLEEDKAVRMSVQALLEVVDSGAKNMEICVVRVGGKKTILEEKDVDEIVKSIEAEAEEGKTSGGG 244
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8723.20189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW08_ECTSI2.420e-14999.10Proteasome subunit alpha type n=2 Tax=Ectocarpus T... [more]
A0A6S9E6K7_HETAK3.580e-11375.45Proteasome subunit alpha type n=2 Tax=Heterosigma ... [more]
A0A835Z7L7_9STRA1.120e-10573.33Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
W7TRL4_9STRA8.630e-9868.95Proteasome subunit alpha type n=2 Tax=Monodopsidac... [more]
A0A7S2F6I3_9STRA2.510e-9769.44Proteasome subunit alpha type n=2 Tax=Dictyocha sp... [more]
A0A7S2RQS1_9STRA1.140e-9668.54Proteasome subunit alpha type n=1 Tax=Rhizochromul... [more]
A0A7S2EX89_TRICV2.200e-9466.23Proteasome subunit alpha type n=1 Tax=Trieres chin... [more]
A0A7S1FT14_9STRA1.150e-9366.98Proteasome subunit alpha type n=1 Tax=Corethron hy... [more]
A0A6U2BRH1_9STRA4.930e-9265.61Proteasome subunit alpha type n=3 Tax=Odontellacea... [more]
B8BR42_THAPS8.100e-9263.59Proteasome subunit alpha type n=2 Tax=Thalassiosir... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8723contigEcto-sp13_S_contig8723:666..4019 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score429.1
Seed ortholog evalue1.3e-117
Seed eggNOG ortholog2880.D7FW08
Preferred namePSMA7
Model size990
KEGG koko:K01191,ko:K02731
KEGG Pathwayko00511,ko03050,map00511,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005819,GO:0005829,GO:0005839,GO:0005840,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009524,GO:0009536,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0015630,GO:0016020,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0022626,GO:0030071,GO:0030163,GO:0031090,GO:0031331,GO:0031597,GO:0031974,GO:0031981,GO:0032270,GO:0032436,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034515,GO:0036211,GO:0042175,GO:0042802,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044456,GO:0044464,GO:0045202,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0090068,GO:0098588,GO:0098794,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990111,GO:1990904,GO:2001252
Exons6
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0183@2759
Ec32 ortholog descriptionproteasome subunit alpha type 7
Ec32 orthologEc-01_002900.1
EC3.2.1.24,3.4.25.1
Cds size672
COG Functional cat.O
CAZyGH38
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8723.20189.1prot_Ecto-sp13_S_contig8723.20189.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8723 666..3701 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464145.1896594-CDS-Ecto-sp13_S_contig8723:665..8301681464145.1896594-CDS-Ecto-sp13_S_contig8723:665..830Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8723 666..830 +
1681464145.2060313-CDS-Ecto-sp13_S_contig8723:1215..12851681464145.2060313-CDS-Ecto-sp13_S_contig8723:1215..1285Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8723 1216..1285 +
1681464145.217628-CDS-Ecto-sp13_S_contig8723:1934..20591681464145.217628-CDS-Ecto-sp13_S_contig8723:1934..2059Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8723 1935..2059 +
1681464145.2286768-CDS-Ecto-sp13_S_contig8723:2602..27401681464145.2286768-CDS-Ecto-sp13_S_contig8723:2602..2740Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8723 2603..2740 +
1681464145.2396834-CDS-Ecto-sp13_S_contig8723:3175..32501681464145.2396834-CDS-Ecto-sp13_S_contig8723:3175..3250Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8723 3176..3250 +
1681464145.2684588-CDS-Ecto-sp13_S_contig8723:3602..37011681464145.2684588-CDS-Ecto-sp13_S_contig8723:3602..3701Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8723 3603..3701 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464145.28191-UTR-Ecto-sp13_S_contig8723:3701..40191681464145.28191-UTR-Ecto-sp13_S_contig8723:3701..4019Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8723 3702..4019 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8723.20189.1

>prot_Ecto-sp13_S_contig8723.20189.1 ID=prot_Ecto-sp13_S_contig8723.20189.1|Name=mRNA_Ecto-sp13_S_contig8723.20189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp
EQGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGL
TADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRP
FGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKN
WANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQA
VAAELEAEAEEAKEASAGDVQMT*
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mRNA from alignment at Ecto-sp13_S_contig8723:666..4019+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8723.20189.1 ID=mRNA_Ecto-sp13_S_contig8723.20189.1|Name=mRNA_Ecto-sp13_S_contig8723.20189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3354bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8723:666..4019+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAACAGGGGTCTTCGGTAGTCTGCGTGAAGGGCAAGGACTGCGTGGTGTT
GGGGGTGGAGAGGCGAGCGACCGCCAAGCTCCAGGACCCCCGCACGATCC
GCAAGATCGTGAAGATCGACAGCCACATCACGCTGGCCTTCGCAGGTCTT
ACGGCTGACGCACGGGTGAGAGCCAGCTGGTGGTAGAACTTGTTGTTGTT
GTCCTTGCTGTTCAATCGCTTTACGTGGTCGTTGTTTCAAGTGTTCCTCT
TGTTTTTTTTTCGGTGCGTTTTTTCTTGTCGGGCGTGACGGCAACACGCG
ATGCTCTGCGCCTTGTCCAGCAGCTGCAACCCTTGTCTTGTCTTGTCTTG
TCTTGTCTTGTCTTGTCTTGTCTTGTCTTGAAGTGTGTCAGTATCAGGCC
GCGTTTCTCTTCTTGATACTGCTGTCTCCCTCGTGTTCTACTACACTAGC
GTGCTGTTGTACTGTGCGTGTATGGGTGCCGGGGGACCCCTGCCAGTGCT
CGTTCGTGCCTGCTTCCTCAACTCTTTTCGCACCTCTCCATTCACTCCAG
GTGCTCGTGGACAAGGCGCGGCTGGAATGCCAGAGCTACCGGCTCACGTG
CGAGGACGCCCCGTCCATCGGTGAGCAGGAAGCGTGGCTGAAACAAGCGC
GGTTTTGCGCAATAGTCTACGCAGCAAAATTAATCAATCAAACATATGGA
ATAAAGTGTTCAATCTGTGCTTTGAGGTCTGCGTGCCCCCTCCCCACTCT
TTCCCTAGATACTCTTAAAATCCTGCGCGTCTGTACATCTAGACTTCCAG
AGGTAGTTGAATAGGGTTCGAACAGTCTGCTCTCTGTCGGGCGAAGTGGC
ACCCTCGGAGGTAGTTGCGTTTCTGTCAAGCTTTACGAAGAGAACGGCTT
TGTTTGTTGCACGTCCCGCGCTCGCACGGATCCACCACCGAGTGTCGCCC
TGCAACAATGTCGGTGTGCTGGGGTGTGCTGCGGTGTCGTGGGGTTCACG
CTGTTGGCGTGTTGCGGTCTGTTCCATCAGGCACTGTCGCTCTGCCGGGG
TGTCTTGTCTTGTGTTCTTTGTGTTGCGCTTCGCGCGCGAAGATAACCTG
CGCATCGCCAAGGGTGTCCTTTCAGCCACACGCTCTCTCTCTCTCTCTCT
CTCTCTGCAATTCCCTTGCGATTGCGAATGTGTGACGTCTTCACATCTTG
GCCCGCTTCCCCACCGTCCTCATACTGCTGTTGCTATTCTGTGCGTCGTT
CGCGCGTGGTGCTCGGCAGAGTACGTCGCCCGCTTCATCGCGCGCACGCA
GCAGCGCTACACACAGCGCGGCGGCATGCGACCGTTCGGGGTTTCCTCCA
TCCTGGCTGGATTTTCGCAGGACGGGACACCGCAGATCTACCAGGTGCGC
CATGCCCCCCCAGGCATCTCCACAGGCTGCCTCTCTCGAAACCATATGTT
CATGCCGTTGCCGATTTGTTCTGCTCGGTTGCATGCATCCTCGGTTTTTC
GATGGCGGCGCTGCTGGTTGTGGAACAAATTCTGCTTAGGTATCCACATT
GGAACTAACTACACCGTTATGCATACTCTGGAAGCGTGGAGCATGACTGC
CTTGCTGCGCTGGTGCGTCCGCTATCCTCGCTGCATGGAACGGCACCGCC
GTCTCCACCCGCCGTGGGGAGGGAGAAGGGCGTGGTGTAGCCCAACCAAC
CCGGACTAAACTGTCGCCGCAGAAAGGAAGGCTGTCTGAGGCGCTGGCGG
CTCTTCTCCCTCTCGTTATTATTCTCATCCTCATCCCCCCCCCCCTCTGT
CTTGTCTGTCTGACTCTCTCTCTCCCTACCCATCTGTCTCTGCCTCTGTC
TATCGACCTCTTCCTCTCCCTCTCCCCCCCGCTTCTCTTTGTCTCTCTCT
CCCTCTCACTCTGTTGGCGAACGATTGGGTTGTTCAGACGGATCCGGCCG
GCACGTATTCTGCGTGGAAGGCGAATGCCATCGGCGGGAGCAACAGCAAC
AACATGCGAGAGTTCTTGGAAAAGAATTGGGCGAACGACATGGACGAGGG
GGCGGCGAAGAAGCTCTGCATGAAGGTGGGGCTTTTCGGCGGCGTTGTTG
AGGTTGTCGCTCTTGCTGTCATGCTAGTGATGGTGGCAGGGTTGATATTG
TCACAATTGTGTTTCCTGGAGGCTGTATTTGTGTGGATGGCAACAGCTTC
ACCGTCCAAGTACAAAGCGAGTGCGATGAAGTACTCTGGTATTTTTCGGG
GCCCTCTTTTCCATCCTGACTCAACCTTTGCACCTTCCCGTTGGACCAAA
AGCGCAGCAGTAACACAGCGGCAGCGGCAGCAGCAGCAGCAGCGCGAAAA
TGCAACTCCCAGAATCCCGCCCCTCCCGCTCACCCCTAGCCTTACTTCTA
AGCAAGCCCCGACGGTGGCTCCGTCGCGTACCCTTATTCCCTTGCCGCGG
TTCCCCGTACCCACCGTCGCCTGGCTTGATTCGGATTTTTGGCCCTTGGG
TGTTGTGCAGGCATTGCTGGAGGTGGTGGACTCGGGCGCAAAAAACATGG
AGATTGCCATCGTCAGGTTCGGGAAGGCCAACGAGGTACGGACAAGGGTT
GACGTCGGCTCTTTTTTTTTTTTCATGCACAACTGCTTTAGCGGAACGAA
GTGGTTGCGTTAAACTACGTAGACTGCTGCATCCAGCGTTGGTGTGTATG
CCGTACACATGGACATGTGTTCGGGTTGCGATGGGCTGGCTCTCTTTTTT
GACCCGCTATCCACGCGATATGCATGCCGCGCCAGCTCTGGATTGTTCCT
ATGTGGCTCACGCATCCACCCAAGACTGTCCGTTGTTTTTGATGTACGTC
AGGCGCCAGTTCGCTTGTTTCCGTGCAGCACGCATCCAATCCAAGATACG
TGCGTATGTGGCCTATTGTATCGTGTGCCGTCTTCAGATGATGACGGAAG
AGATGATGCAAGCGGTTGCGGCCGAGCTGGAGGCGGAGGCGGAGGAGGCG
AAGGAGGCTTCAGCGGGAGACGTGCAAATGACGTAGATAGCAGCAAAAGA
GCAGTAGAACCTACATAATCACGCCGGGTCGTTGGCGCTAGCTCTCTTCT
GATGTAGGGGGCTGGGAGGGGGACACAAGCACGCTGGGTCGTCGGCGCTG
TTTCTCTTCTTACGGAGGCAATGTGGGTGTTGGGCTACCGTATCCATGTG
CAAGATTCGCTCGCAAACGTTAACTTACACATGAGCCTGGCTGGCGTTTT
GTTGATCCATCATATGGTGGCGTTAGTCTGTGTTTGCGCTTACCTGATGT
GACTGGCTTGCTTCTAAAGGTCGTTGTCCGTAGTGGAGAGTCAACAGAAG
ACAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8723:666..4019+

>mRNA_Ecto-sp13_S_contig8723.20189.1 ID=mRNA_Ecto-sp13_S_contig8723.20189.1|Name=mRNA_Ecto-sp13_S_contig8723.20189.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8723:666..4019+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAACAGGGGTCTTCGGTAGTCTGCGTGAAGGGCAAGGACTGCGTGGTGTT
GGGGGTGGAGAGGCGAGCGACCGCCAAGCTCCAGGACCCCCGCACGATCC
GCAAGATCGTGAAGATCGACAGCCACATCACGCTGGCCTTCGCAGGTCTT
ACGGCTGACGCACGGGTGCTCGTGGACAAGGCGCGGCTGGAATGCCAGAG
CTACCGGCTCACGTGCGAGGACGCCCCGTCCATCGAGTACGTCGCCCGCT
TCATCGCGCGCACGCAGCAGCGCTACACACAGCGCGGCGGCATGCGACCG
TTCGGGGTTTCCTCCATCCTGGCTGGATTTTCGCAGGACGGGACACCGCA
GATCTACCAGACGGATCCGGCCGGCACGTATTCTGCGTGGAAGGCGAATG
CCATCGGCGGGAGCAACAGCAACAACATGCGAGAGTTCTTGGAAAAGAAT
TGGGCGAACGACATGGACGAGGGGGCGGCGAAGAAGCTCTGCATGAAGGC
ATTGCTGGAGGTGGTGGACTCGGGCGCAAAAAACATGGAGATTGCCATCG
TCAGGTTCGGGAAGGCCAACGAGATGATGACGGAAGAGATGATGCAAGCG
GTTGCGGCCGAGCTGGAGGCGGAGGCGGAGGAGGCGAAGGAGGCTTCAGC
GGGAGACGTGCAAATGACGTAG
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