mRNA_Ecto-sp13_S_contig8716.20182.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8716.20182.1
Unique NamemRNA_Ecto-sp13_S_contig8716.20182.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: D7FW21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW21_ECTSI)

HSP 1 Score: 935 bits (2416), Expect = 0.000e+0
Identity = 525/585 (89.74%), Postives = 543/585 (92.82%), Query Frame = 1 
Query:    1 VSTPMSSRSFDGEVEGDARAPPGVKRKKGRPRGAPNKKPRKAADGSIARNMTAAQLQQLVKLAQSKGLRRSPEREGDGDGEDGNIAPEDG-SSGRSTLELLADEAGISVGASAGRGGNSNSNRPTNDEPWLSPGLEVGEIVDVDNDDEIDDID-ESFGDLDDDDVPFGAEIRTAEKRIRELRRKQXXXXXXXXXXXXXXXXXXXXXXALDAALAAVYGPEGRPSDLLSAAKQRKSSGADIASPMLDGRVQDEGQEEADPQVQQRAPPAPYVRPEVGSSVDDDNIVEEKIEFNDLFRGVGIGDEGAQERGEDQLPDAVELIDRLDELLALDPPSESNARLPHPEAEPDEETVRLMQARGMMMGLERQMSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGYLFFRHLCEQHEANTENIGILVESESTCTKEALDNVVKEVSRMEREELHERERGGGGGSAAWPRQKYHFTLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVANRE 1749
            +S PMSSRSFDGE EGD RAPP VKRK GRP+GAPNKKPRKAADGSIARNMTAAQLQQLV+LA+SKGL+RSPEREGDGDGEDGN APEDG SSGRSTLELLADEAGISVGASAGRGG+SNSNRPTND+PW S GLE GE+VD DNDD+IDDID ESFGDLD+DDVPFGAEIRTAEKR+RELRRKQXXXXXXXXXXXXXXXXXXXX  ALDAALAAVYGP GRPSDLLS AKQRKSSGA+I+SPM+DGRVQDEGQEE DPQVQQR PP PY RPEVGSSVDDDN VEEK EFNDLFRGVGIGD G QERGEDQLPDA+ELIDRLDELLALDPPSES+ARLPHPEAEPDEETVRLMQ           MSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGY+FFRHLCEQHE  TENIGILVESESTCTKEALDNVVKEVSRMEREELHERER G G SAAWPRQKYHFTLISNEYHLSRIITVHQISE VSLLAPLKLLEASWG EQVPYPYACSNDDAKEFQA+VYKTLEDLVPLQVNVQAVANRE
Sbjct:    1 MSAPMSSRSFDGEAEGDDRAPPRVKRKGGRPKGAPNKKPRKAADGSIARNMTAAQLQQLVELARSKGLQRSPEREGDGDGEDGNNAPEDGGSSGRSTLELLADEAGISVGASAGRGGDSNSNRPTNDDPWHSAGLEGGELVDGDNDDDIDDIDDESFGDLDNDDVPFGAEIRTAEKRVRELRRKQXXXXXXXXXXXXXXXXXXXXAAALDAALAAVYGPGGRPSDLLSTAKQRKSSGAEISSPMVDGRVQDEGQEEEDPQVQQRVPPVPYGRPEVGSSVDDDNSVEEKFEFNDLFRGVGIGDAGTQERGEDQLPDAIELIDRLDELLALDPPSESDARLPHPEAEPDEETVRLMQ-----------MSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGYVFFRHLCEQHEVGTENIGILVESESTCTKEALDNVVKEVSRMEREELHEREREGEGRSAAWPRQKYHFTLISNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQANVYKTLEDLVPLQVNVQAVANRE 574
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: A0A6H5JFC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC6_9PHAE)

HSP 1 Score: 695 bits (1793), Expect = 1.220e-246
Identity = 405/453 (89.40%), Postives = 418/453 (92.27%), Query Frame = 1 
Query:    1 VSTPMSSRSFDGEVEGDARAPPGVKRKKGRPRGAPNKKPRKAADGSIARNMTAAQLQQLVKLAQSKGLRRSPEREGDGDGEDGNIAPED-GSSGRSTLELLADEAGISVGASAGRGGNSNSNRPTNDEPWLSPGLEVGEIVDVDNDDEIDD----IDESFGDLDDDDVPFGAEIRTAEKRIRELRRKQXXXXXXXXXXXXXXXXXXXXXXALDAALAAVYGPEGRPSDLLSAAKQRKSSGADIASPMLDGRVQDEGQEEADPQVQQRAPPAPYVRPEVGSSVDDDNIVEEKIEFNDLFRGVGIGDEGAQERGEDQLPDAVELIDRLDELLALDPPSESNARLPHPEAEPDEETVRLMQARGMMMGLERQMSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGYLFFRHLCEQHEA 1344
            +S PMSSRSFDGE EGD RAPP VKRK GRP+GAPNKKPRKAA GSIARNMTAAQLQQLV+LAQSKGLRRSPEREGDGDGEDGN APED GSSGRSTLELLADEAGISVGA  GRGGNSN+NRPTND+PW S GLE GE  D DNDD+I      IDE+FGDLDDDDVPFGAEIRTAEKRIRELRRKQXXXXXXXXXXXXXXXXXXXXXX     LAAVYGPEGRPSDLLSAAKQRKSS ADIASPM+DGRVQDEGQEEADPQVQQR PPAPY RPEVGSSVDDDN VEEK EFN LFRG+GIGD G QERGEDQLPDA+E+IDRLDELLALDPPSESNARLP+PEAEPDEETVRLMQARGMMMGLERQMSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGY+FFRHLCEQHEA
Sbjct:    1 MSAPMSSRSFDGEAEGDDRAPPRVKRKGGRPKGAPNKKPRKAAGGSIARNMTAAQLQQLVELAQSKGLRRSPEREGDGDGEDGNNAPEDDGSSGRSTLELLADEAGISVGAGVGRGGNSNNNRPTNDDPWHSAGLEGGE-TDGDNDDDIXXXXXXIDENFGDLDDDDVPFGAEIRTAEKRIRELRRKQXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAVYGPEGRPSDLLSAAKQRKSSRADIASPMVDGRVQDEGQEEADPQVQQRVPPAPYGRPEVGSSVDDDNSVEEKFEFNYLFRGMGIGDAGKQERGEDQLPDAIEVIDRLDELLALDPPSESNARLPYPEAEPDEETVRLMQARGMMMGLERQMSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNRVADASAGYIFFRHLCEQHEA 452
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: A0A6H5JCZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ4_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 1.310e-73
Identity = 131/144 (90.97%), Postives = 134/144 (93.06%), Query Frame = 1 
Query: 1318 RHLCEQHEANTENIGILVESESTCTKEALDNVVKEVSRMEREELHERERGGGGGSAAWPRQKYHFTLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVANRE 1749
            R +C   + +TENIGILVESESTCTKEALDNVVKEVSRMEREELHERER G G SAAWPRQKYHFTLISNEYHLSRIITVHQISE VSLLAPLKLLEASWG EQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVANRE
Sbjct:   10 RSVCHVVQVDTENIGILVESESTCTKEALDNVVKEVSRMEREELHEREREGEGRSAAWPRQKYHFTLISNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVANRE 153
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: A0A2V3IJY6_9FLOR (DUF218 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJY6_9FLOR)

HSP 1 Score: 139 bits (351), Expect = 1.680e-31
Identity = 84/208 (40.38%), Postives = 119/208 (57.21%), Query Frame = 1 
Query: 1135 VLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVR--DNRVADASAGYLFFRHLCEQHEANTENIGILVESESTCTKEALDNVVKEVSRMEREELHERERGGGGGSAAWPRQKYHFTLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQ-AVANRE 1749
            V+VV GKHLIRDQ+TVEYA RI  LV+ +  G L PD++CFTGG     D  +++A+AGY FFR++CE+   +      ++E  S  TKE L NV++E+ R          R G    +A      HFTL+S++YHL RI  VH++S   S+L PL++  ++W C    Y +  S D A  F         DL  L VN++ A+ +RE
Sbjct:  104 VVVVFGKHLIRDQLTVEYAKRIVTLVKQIARGALNPDVICFTGGNGLNDDGTISEAAAGYSFFRNICEEASIDVSRFQYILEHNSHNTKENLRNVIEELRR----------RFGADALSAC-----HFTLVSSDYHLIRIQEVHRLSPRQSVLFPLEVSASTWNCIFAAYQFCVSRDPATAFLGRAVVLANDLGILHVNLKGALDDRE 296
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: A0A7R9U259_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U259_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.550e-30
Identity = 77/204 (37.75%), Postives = 120/204 (58.82%), Query Frame = 1 
Query: 1135 VLVVIGKHLIRDQVTVEYASRIRRLVQGLK----SGRLQPDLVCFTGGTVRDNRVADASAGYLFFRHLCEQHEANTENIGILVESESTCTKEALDNVVKEVSRMEREELHERERGGGGGSAAWPRQKYHFTLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQA 1734
            VLV  GK L+RDQVT+EYASRIR +V+ LK    +G   PD++CFTGG + D+ ++ A+AGY+FFR + E    +  +  +L+E ES  +++A+D +V E++    E          GG    P +  H+TLIS  +HL R+  VH  S   S+L  ++    ++   +  YPY  S D+   F A++   +E+LVP+ VN++A
Sbjct:  162 VLVCFGKRLVRDQVTLEYASRIRTMVKYLKRLHNTGHKLPDVICFTGGYMGDSAISSATAGYIFFRQMAEYAGVDITSSQLLLEEESEFSRDAIDLIVPEIAEAAAE----------GG--VLPGETLHYTLISTTHHLRRLAHVHVNSARSSMLKKIEDAGGTYTFLKSSYPYLASPDEGLRFLANIILVVEELVPVLVNLEA 353
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: A0A7S1TFF2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFF2_9RHOD)

HSP 1 Score: 132 bits (333), Expect = 4.660e-30
Identity = 79/202 (39.11%), Postives = 117/202 (57.92%), Query Frame = 1 
Query: 1135 VLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVRDNR-VADASAGYLFFRHLCEQHEANTENIGILVESESTCTKEALDNVVKEVSRMEREELHERERGGGGGSAAWPRQKYHFTLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAV 1737
            V VV+GK LIRDQVT E+A RI  LV+ +K G+L+PD+VCFTGG   +N   + A+AGY+FFR LCEQ E + + I  ++E  S  ++ +L NV           LH  +   G  S      + HFT +S++YHL R+  VH+++  +SLL PL+++ A+W      YP+  S+D    F   V   L +L  + V++  V
Sbjct:   47 VAVVLGKRLIRDQVTKEFARRITTLVKQIKVGQLKPDVVCFTGGRSEENASTSQAAAGYMFFRSLCEQAEVDLDGIQFMLEEISLNSRASLANV-----------LHSLKSLLGTQSV----NRCHFTFVSSDYHLFRLQEVHRLNPRLSLLHPLEVVAATWHYLFTFYPFCVSDDPKTAFLGRVVVLLNELAIVMVDINGV 233
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: A0A7S1TXW1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXW1_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.850e-27
Identity = 79/206 (38.35%), Postives = 116/206 (56.31%), Query Frame = 1 
Query: 1135 VLVVIGKHLIRDQVTVEYASRIRRLVQGLK----SGRLQPDLVCFTGGTVRDNRVADASAGYLFFRHLCEQHEANTENIGILVESESTCTKEALDNVVKEVSRMEREELHERERGGGGGSAAWPRQKYHFTLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVA 1740
            V++  GK L+RDQVT+EYASRIR LV+ L+    S +  PD+VCFTGG +  + ++ ASAGY+FFR + E    +  +  +L+E ES  ++EALD VV EVS                 +   P Q  H+TLIS   H+ RI  VH+ S   S+L  ++    S+   +   P+  S D++  F A +   +E+LVP++VN Q  A
Sbjct:  224 VVLCFGKRLVRDQVTLEYASRIRTLVRYLRRLKESRQRGPDIVCFTGGYMGASCISSASAGYMFFRQMAECAGVDISHGHVLLEEESHVSREALDLVVAEVSEA------------AVRAGQLPGQTVHYTLISTTQHVRRIEYVHEHSHPSSMLRSIEEAGGSFSLLKASNPFLSSPDESLSFLAHLMLVVEELVPIRVNFQGAA 417
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: M1UUY3_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UUY3_CYAM1)

HSP 1 Score: 123 bits (308), Expect = 1.100e-25
Identity = 69/184 (37.50%), Postives = 109/184 (59.24%), Query Frame = 1 
Query: 1117 NPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVR-DNRVADASAGYLFFRHLCEQHEANTENIGILVESESTCTKEALDNVVKEVSRMEREELHERERGGGGGSAAWPRQKYHFTLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQVPYPYACSNDDA 1665
            N   R+V+V+ GK L+RDQ+T EYA RI  LV+ + +GR++P  VCFTGG    D+ V++A AGYLFFRH+CE+   + +++ I++E +    ++ + +++ ++     E+L         GS        HFT +S++YHL RI  V   + N+SLLAPL+ L  +       YP+A S + A
Sbjct:  208 NSPFREVVVIFGKRLVRDQITYEYAVRILTLVRHMVTGRIKPSAVCFTGGRDHPDSLVSEAVAGYLFFRHVCEEFSISLDSVAIILEEQHLNARDCMSSILTQLG----EQLV--------GS--------HFTFVSSDYHLIRIREVEAAAPNLSLLAPLRKLRGTVSYAYTTYPFALSKNAA 371
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: A0A7J7IM92_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM92_9RHOD)

HSP 1 Score: 118 bits (295), Expect = 4.100e-24
Identity = 71/191 (37.17%), Postives = 108/191 (56.54%), Query Frame = 1 
Query: 1102 DDQLL--NPELRQVLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRLQPDLVCFTGGTVR-DNRVADASAGYLFFRHLCEQHEANTENIGILVESESTCTKEALDNVVKEVSRMEREELHERERGGGGGSAAWPRQKYHFTLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQVPYPYACSNDDA 1665
            DD ++  +   R+V+V+ GK L+RDQ+T EYA RI  LV+ + +GR+QP  VCFTGG    D+ V++A AGYLFFRH+CE+   +   + I++E +    ++ + +++ ++     E L         GS        HFT +S++YHL RI  V      +SLLAPL+ L  +       YP+A S D A
Sbjct:  189 DDNVIAKDASFREVVVIFGKRLVRDQITYEYAVRILTLVRHMATGRIQPSAVCFTGGRDHEDSLVSEAVAGYLFFRHVCEEVGLDLSQVTIILEEQHLNARDCMSSILNQLG----EHLV--------GS--------HFTFVSSDYHLIRIREVEASVPKLSLLAPLRKLRGTVSYAYATYPFALSKDAA 359
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BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Match: A0A7S4M5J4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M5J4_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.080e-23
Identity = 76/200 (38.00%), Postives = 109/200 (54.50%), Query Frame = 1 
Query: 1135 VLVVIGKHLIRDQVTVEYASRIRRLVQGLKSGRL-QPDLVCFTGGTVRDNRVADASAGYLFFRHLCEQHEANTENIGILVESESTCTKEA--LDNVVKEVSR------MEREELHERERGGGGGSAAW---------PRQK---YHFTLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQ--VPYPYACSNDDA 1665
            V VV GK L+RDQ+TVEYASRIR L +  K   L +P LVCF GG    N V+DA AGY+FFRH+CE    +   + + ++S+    +EA  L +V +EV +      ++R    +   GG G S+++          R+K    HF+L+S EYHL  +  VH  S   SLL  ++ L+ +   +   VP PY    DD+
Sbjct:   85 VAVVFGKRLVRDQITVEYASRIRTLARLFKEEPLFRPSLVCFCGGVGPGNHVSDADAGYIFFRHMCEAQNIDLAGVSVFIDSDPASGQEAIALQHVTEEVRKKYLKGWLKRSPAADSAGGGDGDSSSFGDLFPGTGRSRRKKVAVHFSLVSTEYHLCNLNDVHHRSPRQSLLKSIERLKEAGTSDSPPVPGPYGRMMDDS 284
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8716.20182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW21_ECTSI0.000e+089.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFC6_9PHAE1.220e-24689.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCZ4_9PHAE1.310e-7390.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V3IJY6_9FLOR1.680e-3140.38DUF218 domain-containing protein n=1 Tax=Gracilari... [more]
A0A7R9U259_9STRA4.550e-3037.75Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1TFF2_9RHOD4.660e-3039.11Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1TXW1_9STRA1.850e-2738.35Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
M1UUY3_CYAM11.100e-2537.50Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A7J7IM92_9RHOD4.100e-2437.17Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S4M5J4_9STRA1.080e-2338.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8716contigEcto-sp13_S_contig8716:397..6074 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score938.3
Seed ortholog evalue1.7e-270
Seed eggNOG ortholog2880.D7FW21
Model size1776
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs2CY8W@1,2S2UA@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_003050.1
Cds size1764
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8716.20182.1prot_Ecto-sp13_S_contig8716.20182.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8716 397..6062 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464144.674322-CDS-Ecto-sp13_S_contig8716:396..4951681464144.674322-CDS-Ecto-sp13_S_contig8716:396..495Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8716 397..495 -
1681464144.6917171-CDS-Ecto-sp13_S_contig8716:1071..12251681464144.6917171-CDS-Ecto-sp13_S_contig8716:1071..1225Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8716 1072..1225 -
1681464144.7037337-CDS-Ecto-sp13_S_contig8716:2568..27461681464144.7037337-CDS-Ecto-sp13_S_contig8716:2568..2746Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8716 2569..2746 -
1681464144.7158763-CDS-Ecto-sp13_S_contig8716:3975..41471681464144.7158763-CDS-Ecto-sp13_S_contig8716:3975..4147Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8716 3976..4147 -
1681464144.726798-CDS-Ecto-sp13_S_contig8716:4480..45611681464144.726798-CDS-Ecto-sp13_S_contig8716:4480..4561Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8716 4481..4561 -
1681464144.7380848-CDS-Ecto-sp13_S_contig8716:4982..60621681464144.7380848-CDS-Ecto-sp13_S_contig8716:4982..6062Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8716 4983..6062 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464144.7490313-UTR-Ecto-sp13_S_contig8716:6062..60741681464144.7490313-UTR-Ecto-sp13_S_contig8716:6062..6074Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8716 6063..6074 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8716.20182.1

>prot_Ecto-sp13_S_contig8716.20182.1 ID=prot_Ecto-sp13_S_contig8716.20182.1|Name=mRNA_Ecto-sp13_S_contig8716.20182.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=588bp
MSSRSFDGEVEGDARAPPGVKRKKGRPRGAPNKKPRKAADGSIARNMTAA
QLQQLVKLAQSKGLRRSPEREGDGDGEDGNIAPEDGSSGRSTLELLADEA
GISVGASAGRGGNSNSNRPTNDEPWLSPGLEVGEIVDVDNDDEIDDIDES
FGDLDDDDVPFGAEIRTAEKRIRELRRKQRRQLKRQRLEHRLEDEIEREA
AALDAALAAVYGPEGRPSDLLSAAKQRKSSGADIASPMLDGRVQDEGQEE
ADPQVQQRAPPAPYVRPEVGSSVDDDNIVEEKIEFNDLFRGVGIGDEGAQ
ERGEDQLPDAVELIDRLDELLALDPPSESNARLPHPEAEPDEETVRLMQA
RGMMMGLERQMSEDDQLLNPELRQVLVVIGKHLIRDQVTVEYASRIRRLV
QGLKSGRLQPDLVCFTGGTVRDNRVADASAGYLFFRHLCEQHEANTENIG
ILVESESTCTKEALDNVVKEVSRMEREELHERERGGGGGSAAWPRQKYHF
TLISNEYHLSRIITVHQISENVSLLAPLKLLEASWGCEQVPYPYACSNDD
AKEFQADVYKTLEDLVPLQVNVQAVANREVGTSGAVR*
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mRNA from alignment at Ecto-sp13_S_contig8716:397..6074-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8716.20182.1 ID=mRNA_Ecto-sp13_S_contig8716.20182.1|Name=mRNA_Ecto-sp13_S_contig8716.20182.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5678bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8716:397..6074- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTCAACGCCGATGTCGAGTAGGAGTTTTGACGGCGAAGTAGAGGGGGA
CGCCCGTGCCCCGCCCGGGGTCAAGCGAAAAAAGGGGCGGCCCAGGGGAG
CGCCCAACAAGAAACCAAGGAAAGCAGCGGACGGGAGCATCGCGAGGAAC
ATGACCGCGGCTCAGCTGCAGCAGCTGGTCAAGCTCGCTCAGTCAAAGGG
GCTCCGAAGGTCTCCCGAGCGTGAAGGCGATGGTGATGGTGAGGACGGCA
ACATTGCGCCTGAAGATGGTAGTAGCGGGAGGAGCACCCTGGAGTTGCTC
GCCGACGAGGCGGGCATCTCCGTCGGTGCAAGTGCCGGACGCGGGGGCAA
CAGCAACAGCAACCGGCCCACGAACGATGAGCCTTGGCTTAGCCCTGGAC
TGGAAGTAGGAGAGATTGTAGATGTCGACAACGACGACGAGATCGACGAT
ATCGACGAGAGTTTCGGAGATCTTGACGACGACGACGTGCCCTTCGGTGC
GGAGATCAGGACCGCCGAGAAGCGGATTCGCGAGCTCAGGCGGAAGCAGC
GGCGGCAGCTCAAGCGCCAGCGGCTGGAGCACAGACTAGAAGACGAGATA
GAGAGGGAAGCGGCCGCGCTGGACGCCGCTCTTGCTGCCGTCTACGGCCC
GGAGGGACGGCCATCCGACCTCCTGAGCGCCGCCAAGCAGCGCAAGAGCA
GCGGAGCGGATATAGCATCGCCGATGTTAGACGGCCGGGTGCAGGACGAG
GGCCAGGAGGAGGCGGACCCGCAGGTGCAGCAGCGAGCACCCCCGGCTCC
TTACGTCCGGCCGGAGGTTGGCAGCAGCGTCGACGACGACAACATCGTCG
AGGAGAAAATCGAGTTTAATGATCTATTCCGGGGGGTGGGAATCGGGGAC
GAGGGCGCGCAAGAGCGAGGGGAAGATCAACTGCCGGACGCGGTCGAACT
GATCGACCGCCTGGATGAGCTGCTGGCTCTTGACCCGCCGAGCGAATCGA
ACGCCAGGTTGCCGCACCCGGAGGCCGAGCCGGACGAGGAGACGGTTCGC
TTGATGCAGGCGAGAGGGATGATGATGGGTTTGGAGCGACAGGTGTTGGT
TGTTGCGCCGCCGAAGCCGTGTAGGCAGCAAAGTGAGAGCAGCCGGTTGC
ATTCCTTCATGTGTGGGGTTGACCGAGAAGCGGCGCGGGTCTCAGCAACG
CAATGCCTGGACGCGTACAATACAATGTAACATCCCGCCCCCGTAGCCTA
CCGTCTGAACAGCGTGATTCCCACCCCCTGTAAGCGCTGCAATCGTGTGA
AGAGCACTGCACGTTGGAGATGAGGGGGTGACCTTGTTGTAAACGGGTGT
CACGTCGAGGACGATTCGCTCGTGTCACAGGGACGTGCAATTGACACTGG
TATTCCCTCCATGGAACGGTGTTGTGCCCTTGTTTAAATTATCCCTCAAC
AAAGGGCTATGCCCCGCCCTCCTCCCCCCTCCGTGCTGGTTTCTGCCCGA
CTGCCTTCAGTAGATGTCCGAAGACGATCAGCTGCTTAACCCCGAACTCC
GGCAGGTGTTGGTGGTCATCGGGAAGCATTTAATCAGAGATCAGGTGAGC
TAATCAGTGGTTGTTGTTGTTGTTGTTGTTGGCGCATTTTTTCAAAGCTA
TTGTGATGTTGCGGTCTGGACCCCAGTGTGCCGCCGACCCCGCTACTGCA
CCAATTTGTGCATTATGTGTAGCATCGCAGCCGATCTGTGTTGTCCCCCA
ACTCTGCTGTGCAGGATCAAAGCCTTCCTCAGCGTAATCCCCCAACTCTG
CTGTGACGAACGAAGCCAATCCAACCCGCGAAACACGCAAGCACTGCGCG
GTCCACTGTCATCAGACAAGGATGCCGGGTGAATGCCACCGCTCAGACCC
CCTCCTCCCGCCCCCCTCTCTTCCTAGGTGACGGTAGAGTATGCGTCACG
AATTAGACGGCTTGTGCAGGGGCTCAAGTCCGGGCGGCTGCAGCCGGACC
TGGTGTGCTTTACGGGGGGCACCGTGAGGGACAACAGGGTTGCGGATGCC
TCCGCGGGGTACCTCTTCTTCCGCCACCTGTGCGAGCAACACGAGGCAAG
TGGGCGACAACCATCAATTGCGACAGAAGTCATGCACGGAGCGCTAATCC
GTAGGTTGCATAAGATATCACACCCCCTGGGCCGATTTTCAACGCTCGAT
TCATCGGCAGAAAAAAGCGACGGCGCTAAAAATGTCGGTGTTGGAACAGT
CTCGTTGAGTGCTTTCCGAAAAGTATCGTTTGAAGTCGGCATCCTCTTGG
TCATGAAGTAATCGAGCTTTAAATATCGGTCCAGGGAGGTGTGGTATCTT
ACGTCATGAAATCTACGGTATTTGCGATGACCTGCTTTTTCAGTACTTTT
GTTTCTTTCTCGTTTCGTGTGGAAGCTCTCCAACGTTGCGACTATACCAG
TGCAAACTCTTTTCCGTGGTTTCGTCGAGGCTGACGCGCGAGATGCTGTG
TTTTGTCGTACGAAGCGACACAGTAGCAGCGCGCGTTGCCCGGAAAATGC
CTGGGCCTGTACGATGAAACCCTGCAACATTCTACTCGCGACACACAGAC
ACACTTTGCTCCTGTGAGTTTGTCTCTGAGCACCGCACTGTTTCAGTCGC
GGTGTTCGCACACACAACGCTACATTTCTTTATGATAGCAACATGGGTGG
GCTCGGAAAAATACGGCTTGTTGGTCAATATTTGTAGAGCGGGTCTGCAG
ATGCCACGAAGAAGACACCATGGTGTACCGGTAGCCCTCCTTCGGCGGGT
GGCAGGTAGCAACGAGGGTGTCGAGAACGCTCTCTCCCTCAAGTCGAAGT
GAATTCCCAAGAAACATCCATACCATAGCTCCAGACGCTACGTTGCCTTC
ACTTCCCTCGACGGTTGGTGTATAGCGGTGGTTTTGTCACAGGTGTGGAC
CCAGAAAACGTCTTGTTTCTTGTGCCGCAGATGGAGAGTACTGCAGTCCA
ACGCGGACCAAGAAGATTCTCGAGAGATCAAAACGATTCGTACGATAGGC
ATCACTTTTGTCGGGAAACAACGACACACGCGCCACCCGCATCATGACCG
ATTGCGATTTTGCACGCCCGCCCCTAACCTTGGCACGCGAGCGGCGCCTC
GGTGGAATAATAACCTCCATTCACGAACATACTAAATCCATATCTATTTC
ATGCAGTAAATACCATCACAGAAAGACTACTTGTACTCGTTGTAGAGGCA
ACCGCAAAAGTATAATATCATGTTCGTCCTTTCTCGACCGGTCGGTCGGT
CGGTCGGTCTGTCACGTTGTTCAGGTAGACACGGAAAACATCGGCATACT
GGTGGAGAGCGAGTCCACGTGCACGAAGGAGGCGCTGGACAACGTGGTAA
AGGAGGTGTCCCGGATGGAGAGGGAGGAGCTTCACGAAAGGGAGAGGGGG
GGGGGGGGGGGGTCTGCGGCGTGGCCGAGACAAAAGTATCACTTCACCCT
CATAAGGTGCGCGTGCGCAGGTAGCACCGGGTTCGTTGGTGACCGCAGGA
GTAGGCCTGTCTTCAGGATAGTCTACTAAGCCTCGATTCTCCGGCTTCCT
CGTCGGTCGTCCTGTTTCAGGGAAAAAAATTCTTTTTTTTTTTCTCCCTG
GGAGACATGCACAGGGAAGGGCTGGTTTTGTCACTGATCAATGTTGGAAT
ACCGTCGCTTTCAATAGGCACCCCCCGACACGTGGATGATGGTGAAGTTA
GGTCGTGCCCAAGGGTAGGAAGACCTTAGCTCCGTACAAGGGGGGCGGTC
GAATTTTGTAGCGCGTCTATGGCCGAGCACCCAATAGAGACAGCCGTACC
GTAGTAATAGGCTTGTTCCCTGAAACTGCCCATCCCGGAAAAGTGTCGTC
AACTCCACGAGAAGCTGTCATCCGTGTAGTGTTGAATGTGCTCACGGGGC
GCCGAAGCCTCGCAAGCGTGTTTGAGCGGGATATTGCTCTCACTCACAAT
AAATCACTTGGGGACACTCCGAAGCGTCTCTCACGGCGCCTAACTTAGGG
CCCTTGGTGCTGCGGGAGCCTTGTCGGCGAAGAGCCCAATGATTTACCAC
GGAAGTCGGCAAACTATTGCACGCGGTCGATTCTAACTAATGAAACACAC
ACGCACACACACAAGCGCACGCGCATCCAAAGTAGTAGCAGCCATGGCAA
ACACGTGCAGTTTTCCTCTGGTATTTTGCTATGCTATGGTATCTGTCTTT
AGTTCGGAGATTAGGGTAGACTCCCCCATGACGCTTGGTCACAGAGTCCC
ATGTCGTGGCCTATAAAAGCATTTTGTGTTTTCCATCGCACTGAGACTGT
TTATTTTCATTGGTGAGCCGGTTAGCGCGGTCGATGCCAATAAATAAGAC
ACACACACACGCCCCCTCACGGAATCCCAGATCACGACCTTTGAAAGCCT
TTTCTGTTTTCAAGCGCATTGAGACTGACATCGTTTCATTGGTCAGCCGG
TCAGCGCGGTCGATATTAACACGGACACACCATCGATAACGATGACCCCT
CATCCACGCCCAATGGCTATCACCGGCCAACTCCTTCCCCAAAGCTATTC
CCCTCGCTCGCACTCACTCTCACCCCCGCCCCGTTGGCTTTTTTTTACCG
TGCGCAGCAACGAGTACCACTTGTCGTGAATCATCCCAAGGCTCTTTCAT
CTCGCTTGCACTCGTTGTCACCCCCCCGTTGGCGTTTTTTGAAACGTTCG
CAGCATCGAGTACCACTTGTCGTGAATCATCCCAAGGCTCTTTCATCTCG
CTTGCACTCATTCTCACCCCCCCATTGGCGTTTTTTGAAACGTTCGCAGC
AACGAGTACCACTTGTCAAGAATCATCACTGTGCACCAGATCAGCGAGAA
CGTAAGCCTGCTGGCCCCGCTCAAGCTGCTGGAAGCCTCGTGGGGCTGCG
AGCAAGTGCCGTACCCGTACGCCTGCTCCAATGACGATGCCAAGGAGTTC
CAGGTTGGCTTTTGTGGTTGGCTTTCGTGTTACTCGTTGTTAATTGTTGT
TGTTTTTGGTGGTGATGCTGGTCTTGCTCGTTGATATTGTTGATGATGAT
GATGTAGTTTTAATGTTTCTATAGAAAAATTGTTACCCTTGATGTCGTTG
GTGTCATAGTTTGATGTTTTTTCAAATGCGTCGTCTTGATTTCGGTTGTT
GTTGTTGTGGTCGTTGTTATTGACCTCTGACGTCGCACGAATTAGTTCTT
AAAGCATACGGTGTAGTATTCCGCTTATGGCTGGTGCCATTGCTAAAGAA
AGGAATCTACACGCCAGAAGTTGACACTTTTTTTTAATTGAAAGCTGAAA
TACACCACCGCGGTGGGGAGAAACGTCCAAGCAACTGCCGACAGGATGGC
GACGAAAGAAAAGGCGATGCTGTTAACCTTCGTCTAAAACCTCTGTTACA
TGCGCCTTGGAAGTTTGCCAACGATGCCCAGCCAGCTCGGACATACACGC
TGGCTATCTCACTGCTATTGTTGTTGGTGGTTGCACCGCTTGTTACTCCT
CCTCTTTCCCCTTTTGTTTTCTCTTGCAGGCCGACGTTTACAAGACGTTA
GAGGACCTCGTGCCCCTCCAGGTCAACGTTCAGGCGGTGGCCAACAGAGA
GGTAGGTACCAGTGGTGCTGTTCGATAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8716:397..6074-

>mRNA_Ecto-sp13_S_contig8716.20182.1 ID=mRNA_Ecto-sp13_S_contig8716.20182.1|Name=mRNA_Ecto-sp13_S_contig8716.20182.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1764bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8716:397..6074- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGAGTAGGAGTTTTGACGGCGAAGTAGAGGGGGACGCCCGTGCCCC
GCCCGGGGTCAAGCGAAAAAAGGGGCGGCCCAGGGGAGCGCCCAACAAGA
AACCAAGGAAAGCAGCGGACGGGAGCATCGCGAGGAACATGACCGCGGCT
CAGCTGCAGCAGCTGGTCAAGCTCGCTCAGTCAAAGGGGCTCCGAAGGTC
TCCCGAGCGTGAAGGCGATGGTGATGGTGAGGACGGCAACATTGCGCCTG
AAGATGGTAGTAGCGGGAGGAGCACCCTGGAGTTGCTCGCCGACGAGGCG
GGCATCTCCGTCGGTGCAAGTGCCGGACGCGGGGGCAACAGCAACAGCAA
CCGGCCCACGAACGATGAGCCTTGGCTTAGCCCTGGACTGGAAGTAGGAG
AGATTGTAGATGTCGACAACGACGACGAGATCGACGATATCGACGAGAGT
TTCGGAGATCTTGACGACGACGACGTGCCCTTCGGTGCGGAGATCAGGAC
CGCCGAGAAGCGGATTCGCGAGCTCAGGCGGAAGCAGCGGCGGCAGCTCA
AGCGCCAGCGGCTGGAGCACAGACTAGAAGACGAGATAGAGAGGGAAGCG
GCCGCGCTGGACGCCGCTCTTGCTGCCGTCTACGGCCCGGAGGGACGGCC
ATCCGACCTCCTGAGCGCCGCCAAGCAGCGCAAGAGCAGCGGAGCGGATA
TAGCATCGCCGATGTTAGACGGCCGGGTGCAGGACGAGGGCCAGGAGGAG
GCGGACCCGCAGGTGCAGCAGCGAGCACCCCCGGCTCCTTACGTCCGGCC
GGAGGTTGGCAGCAGCGTCGACGACGACAACATCGTCGAGGAGAAAATCG
AGTTTAATGATCTATTCCGGGGGGTGGGAATCGGGGACGAGGGCGCGCAA
GAGCGAGGGGAAGATCAACTGCCGGACGCGGTCGAACTGATCGACCGCCT
GGATGAGCTGCTGGCTCTTGACCCGCCGAGCGAATCGAACGCCAGGTTGC
CGCACCCGGAGGCCGAGCCGGACGAGGAGACGGTTCGCTTGATGCAGGCG
AGAGGGATGATGATGGGTTTGGAGCGACAGATGTCCGAAGACGATCAGCT
GCTTAACCCCGAACTCCGGCAGGTGTTGGTGGTCATCGGGAAGCATTTAA
TCAGAGATCAGGTGACGGTAGAGTATGCGTCACGAATTAGACGGCTTGTG
CAGGGGCTCAAGTCCGGGCGGCTGCAGCCGGACCTGGTGTGCTTTACGGG
GGGCACCGTGAGGGACAACAGGGTTGCGGATGCCTCCGCGGGGTACCTCT
TCTTCCGCCACCTGTGCGAGCAACACGAGGCAAACACGGAAAACATCGGC
ATACTGGTGGAGAGCGAGTCCACGTGCACGAAGGAGGCGCTGGACAACGT
GGTAAAGGAGGTGTCCCGGATGGAGAGGGAGGAGCTTCACGAAAGGGAGA
GGGGGGGGGGGGGGGGGTCTGCGGCGTGGCCGAGACAAAAGTATCACTTC
ACCCTCATAAGCAACGAGTACCACTTGTCAAGAATCATCACTGTGCACCA
GATCAGCGAGAACGTAAGCCTGCTGGCCCCGCTCAAGCTGCTGGAAGCCT
CGTGGGGCTGCGAGCAAGTGCCGTACCCGTACGCCTGCTCCAATGACGAT
GCCAAGGAGTTCCAGGCCGACGTTTACAAGACGTTAGAGGACCTCGTGCC
CCTCCAGGTCAACGTTCAGGCGGTGGCCAACAGAGAGGTAGGTACCAGTG
GTGCTGTTCGATAA
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