prot_Ecto-sp13_S_contig8707.20172.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8707.20172.1
Unique Nameprot_Ecto-sp13_S_contig8707.20172.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length595
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8707.20172.1 vs. uniprot
Match: D7G0X0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X0_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.340e-48
Identity = 139/160 (86.88%), Postives = 142/160 (88.75%), Query Frame = 0 
Query:  260 KTTPHAPKREGDVSIRLGVSVDPSSLVANLPGGCGGXXXXXXXXXXXXXXXXPEPDFETASXXXXXX-KAIGSGGPDGDRVADRLGGGYWGGGAGAGPQGHRGSXXXXXXXXNDQDPGDMYAGXXXXXXXXDAVLGWGRQEGGNNPGPMGVLGGIGGDQR 418
            KTTPHAPKREGDVSIRLGVSVD S+LV NLPGG G XXXXXXXXXX      PEPDF+ AS  XXXX KAIGSGGPDGDRVADRLGGGYWGGGA  GPQGHRGSXXXXXXXX DQDPGDMYAGXXXXXXX DA+LGWGRQEGGNNPGPMGVLGGIGGDQR
Sbjct:  231 KTTPHAPKREGDVSIRLGVSVDASTLVGNLPGG-GXXXXXXXXXXXSRSARSPEPDFDAASGVXXXXXKAIGSGGPDGDRVADRLGGGYWGGGAXXGPQGHRGSXXXXXXXXXDQDPGDMYAGXXXXXXX-DAILGWGRQEGGNNPGPMGVLGGIGGDQR 388
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8707.20172.1 vs. uniprot
Match: A0A6H5KHX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX5_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 8.450e-22
Identity = 195/379 (51.45%), Postives = 203/379 (53.56%), Query Frame = 0 
Query:  260 KTTPHAPKREGDVSIRLGVSVDPSSLVANLPGGCGGXXXXXXXXXXXXXXXX---------PEPDFETASXXXXXXKAI--------GSGGPDGDRVADRLGGGYWGGGAGAGPQGHRGSXXXXXXXXNDQDPGDMYAGXXXXXXXXDAVLGWGRQEG--------------------------GNNPGPMGVLGGIGGDQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYSHPLGIPXXXXXXXXXXXXXXXXXXXXXXXGLRPLARDSHFPGHGVSYRDQLHQQQQQHLYGPNPYGFLPHMSSGSQGGYGPGAIGGDNG 595
            KTTPHAPKREGDVSIRLGVSVD SSLV NL GG   XXXXXXXXX                P+       XXXXXX  +        GS    G+   +R            GP+G   +          +  G              A+L WG                              GNNPGPMGVLGGIG DQR                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         EYSHPLGIP       XXXXXXXXXX      GLRPLARDSHF      YRDQL QQQQQHLYGPNPYGFLPHMSSGSQGGYGPGAIGGDNG
Sbjct:  358 KTTPHAPKREGDVSIRLGVSVDASSLVGNLAGGXXXXXXXXXXXXTAAPADRRGHRSPISRPQAAXXXXXXXXXXXXXVRTETEWQTGSAAATGEEERER------------GPRGTEVAEAWVEGAEMIRIRGTCMRVAAAAAV---AMLSWGGDGKKLVCEIEHVEKALWGISGASALLCVCGNNPGPMGVLGGIGEDQRHQQYASSAVDDQQALRMRRLGQDPPQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPD-----EYSHPLGIPPPRSSQHXXXXXXXXXXMTGGGGGLRPLARDSHF------YRDQL-QQQQQHLYGPNPYGFLPHMSSGSQGGYGPGAIGGDNG 709
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8707.20172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0X0_ECTSI3.340e-4886.88EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KHX5_9PHAE8.450e-2251.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8707contigEcto-sp13_S_contig8707:216..4431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8707.20172.1mRNA_Ecto-sp13_S_contig8707.20172.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8707 216..4431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8707.20172.1 ID=prot_Ecto-sp13_S_contig8707.20172.1|Name=mRNA_Ecto-sp13_S_contig8707.20172.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=595bp
CVVSNCTKLSTYGYEGFLARYCFSHKSSGMVYLKNRKRCEFYECTRQPTY
GQDGQRARYCSSHKEDGMIDVKNCRCKHPGCTRQPNYGHEGGRAKYCSSH
KLAKMVNVVSRRCEFPACKRQPIYGFEGEKATFCPTHRMDAMSDVVNRHC
EYTGCTKTPSYGYVGERAQFCSHHHLPDMEDVKNRRCEWHECRRYPIFGH
EGERARFCSAHKTDDMVNVRNRRCEEGSCTKLPTHGFPGEKAKACQAHAK
SGMVNLKGRKTTPHAPKREGDVSIRLGVSVDPSSLVANLPGGCGGGGGGA
GNGGSSRSARSPEPDFETASGGGGGGKAIGSGGPDGDRVADRLGGGYWGG
GAGAGPQGHRGSGGVGRGRGNDQDPGDMYAGGGGGSGGGDAVLGWGRQEG
GNNPGPMGVLGGIGGDQRQQQYASSAVDDQQALRMRRLGQDPPQDVKQQH
QQQQQHMRSMQQQQPTGLHRRPGQQQQQQQQQQQLGGTSLDHNFYGGGGV
PPDEYSHPLGIPPPRSSQQQQQQQRQQQFMTGGGGGLRPLARDSHFPGHG
VSYRDQLHQQQQQHLYGPNPYGFLPHMSSGSQGGYGPGAIGGDNG
back to top