prot_Ecto-sp13_S_contig8689.20145.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8689.20145.1
Unique Nameprot_Ecto-sp13_S_contig8689.20145.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length160
Homology
BLAST of mRNA_Ecto-sp13_S_contig8689.20145.1 vs. uniprot
Match: A0A6H5KD36_9PHAE (eIF3g domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD36_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 1.070e-90
Identity = 139/150 (92.67%), Postives = 144/150 (96.00%), Query Frame = 0
Query:   11 VNSVMPGRQAWGDDDXXDYLPPRQESAVDSKGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQVDDNASYTIKSMEEIRMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNEVAPPEDEA 160
            VNS+MPGRQAWGD  XX YLPPRQESAVDS GVKSIVEYHFN+NGAKVKRTTKVKVFTEHTRVHKSCLERTQW KFGLAAQVDDNAS+++KSMEEIRMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNE APPEDEA
Sbjct:   34 VNSIMPGRQAWGDXXXXXYLPPRQESAVDSNGVKSIVEYHFNANGAKVKRTTKVKVFTEHTRVHKSCLERTQWKKFGLAAQVDDNASHSMKSMEEIRMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNEAAPPEDEA 183          
BLAST of mRNA_Ecto-sp13_S_contig8689.20145.1 vs. uniprot
Match: D8LTT6_ECTSI (Putative initiation factor eIF3 g subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT6_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 1.880e-59
Identity = 103/145 (71.03%), Postives = 110/145 (75.86%), Query Frame = 0
Query:   15 MPGRQAWGDDDXXDYLPPRQESAVDSKGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQVDDNASYTIKSMEEIRMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNEVAPPEDE 159
            MPGRQAWGDDD  DYLPPRQESAVDSKGVKSIVEYHFN+NGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQ +DN S  IK  EE R E P++SR+ +E PNS  D LK         H MRT     S  E A PE+E
Sbjct:    1 MPGRQAWGDDDDDDYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQGEDNPSSPIKWREEFRREPPRDSRKPEENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEE 145          
BLAST of mRNA_Ecto-sp13_S_contig8689.20145.1 vs. uniprot
Match: A0A835YJN9_9STRA (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 7.040e-45
Identity = 82/143 (57.34%), Postives = 106/143 (74.13%), Query Frame = 0
Query:   18 RQAWGD-DDXXDYLPPRQESAVDSKGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQVDDNASYTIKSMEEIRMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNEVAPPEDE 159
            R  WGD DD  DYLPPRQES VD KG+K++VE+ FN  G K K TTKVKVF E  R+ ++  ER +W  FG AA+V DN SYT+ S E++ METP+ES+EADE+P+++ D+LKEAMER+RR++AMR  G+L    E AP +DE
Sbjct:    2 RGNWGDEDDDPDYLPPRQESGVDGKGIKTVVEWAFNDAGQKTKTTTKVKVFAEQQRISRAVAERKKWKVFGAAAEVSDNHSYTLTSQEQVMMETPRESKEADEQPSNVSDSLKEAMERVRRRNAMRQMGML-GDGEAAPTDDE 143          
BLAST of mRNA_Ecto-sp13_S_contig8689.20145.1 vs. uniprot
Match: A0A0K9NXZ8_ZOSMR (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NXZ8_ZOSMR)

HSP 1 Score: 76.3 bits (186), Expect = 1.240e-13
Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 0
Query:   21 WG---DDDXXDYLPPRQESAVDSKGVKSIVEYHFNSNGAKVKRTTKVKVFT-EHTRVHKSCLERTQWNKFGLAAQVDDNASYTIKSMEEIRMETP 111
            WG   D+D  D+LPP      D  GVK ++EY FN +GAKVK TT  +V      R+ K  +ER  W+KFG AA  D  A +T  S EEI +E P
Sbjct:   12 WGELEDEDDYDFLPPPLSIGPDENGVKKLIEYKFNDDGAKVKVTTTTRVRKLAKARLSKKAIERRAWSKFGDAANADPGARHTAVSTEEIILERP 106          
BLAST of mRNA_Ecto-sp13_S_contig8689.20145.1 vs. uniprot
Match: A0A6D2KV84_9BRAS (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KV84_9BRAS)

HSP 1 Score: 73.6 bits (179), Expect = 1.350e-12
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0
Query:   21 WGD---DDXXDYL-PPRQESAVDSKGVKSIVEYHFNSNGAKVKRTTKVKVFT-EHTRVHKSCLERTQWNKFGLAAQVDDNASYTIKSMEEIRMETP 111
            WG+   DD  D+L PP Q    D  G+K+++EY FN+ G KVK+TT+ ++      R+ K  +ER  W KFG AA  DD ++ T+ S EEI ME P
Sbjct:   14 WGEMEEDDNFDFLLPPMQVIGPDHTGLKTVIEYDFNAEGHKVKKTTRTRIKKLAIARLSKHAIERRNWPKFGDAANGDDGSNLTMMSTEEIIMERP 109          
BLAST of mRNA_Ecto-sp13_S_contig8689.20145.1 vs. uniprot
Match: A0A2U1P8Q5_ARTAN (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1P8Q5_ARTAN)

HSP 1 Score: 68.2 bits (165), Expect = 1.190e-10
Identity = 41/98 (41.84%), Postives = 54/98 (55.10%), Query Frame = 0
Query:   21 WGD---DDXXDY---LPPRQESAVDSKGVKSIVEYHFNSNGAKVKRTTKVKVFT-EHTRVHKSCLERTQWNKFGLAAQVDDNASYTIKSMEEIRMETP 111
            WG+   ++  DY   LPP+Q    D+ G+K  +EY FN  G KVK+TT  +V    + R+ K  LER  W+KFG A   D  A  T+ S EEI  E P
Sbjct:   11 WGELDEEEDTDYNYLLPPKQTIGPDNNGIKKTIEYSFNDEGHKVKKTTTTRVRKLANARLSKKALERRGWSKFGDAVHEDVGARLTMVSTEEIVFERP 108          
BLAST of mRNA_Ecto-sp13_S_contig8689.20145.1 vs. uniprot
Match: A0A084G143_PSEDA (Eukaryotic translation initiation factor 3 subunit G n=2 Tax=Microascaceae TaxID=5593 RepID=A0A084G143_PSEDA)

HSP 1 Score: 55.1 bits (131), Expect = 5.790e-6
Identity = 30/75 (40.00%), Postives = 41/75 (54.67%), Query Frame = 0
Query:   21 WGDDDXXDY----LPPRQESAVDSKGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQ 91
            W DD+  D     LPP Q +  +  G K+I+ YH N NG KVK T +V+  T   +V+    ER  W KFG +A+
Sbjct:    9 WADDEDIDEISTELPPAQ-TISNKDGTKTIITYHINENGQKVKTTRRVRYTTHTEKVNPRVAERKGWTKFGASAK 82          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8689.20145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KD36_9PHAE1.070e-9092.67eIF3g domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LTT6_ECTSI1.880e-5971.03Putative initiation factor eIF3 g subunit n=1 Tax=... [more]
A0A835YJN9_9STRA7.040e-4557.34Eukaryotic translation initiation factor 3 subunit... [more]
A0A0K9NXZ8_ZOSMR1.240e-1345.26Eukaryotic translation initiation factor 3 subunit... [more]
A0A6D2KV84_9BRAS1.350e-1243.75Eukaryotic translation initiation factor 3 subunit... [more]
A0A2U1P8Q5_ARTAN1.190e-1041.84Eukaryotic translation initiation factor 3 subunit... [more]
A0A084G143_PSEDA5.790e-640.00Eukaryotic translation initiation factor 3 subunit... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 35..131
e-value: 1.3E-16
score: 61.1
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 19..127
NoneNo IPR availablePANTHERPTHR10352:SF34coord: 19..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8689contigEcto-sp13_S_contig8689:2037..4354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8689.20145.1mRNA_Ecto-sp13_S_contig8689.20145.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8689 2037..4355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8689.20145.1 ID=prot_Ecto-sp13_S_contig8689.20145.1|Name=mRNA_Ecto-sp13_S_contig8689.20145.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=160bp
GHTTFVRQFIVNSVMPGRQAWGDDDDDDYLPPRQESAVDSKGVKSIVEYH
FNSNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQVDDNASYTI
KSMEEIRMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLEST
NEVAPPEDEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024675eIF3g_N