prot_Ecto-sp13_S_contig8678.20128.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8678.20128.1
Unique Nameprot_Ecto-sp13_S_contig8678.20128.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length173
Homology
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: D8LDE1_ECTSI (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDE1_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 3.460e-111
Identity = 168/171 (98.25%), Postives = 169/171 (98.83%), Query Frame = 0
Query:    1 MSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVY 171
            MSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHR AHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHII VFC+GVFFFLLTPEVY
Sbjct:   77 MSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRIAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIAVFCIGVFFFLLTPEVY 247          
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: K3W7E3_GLOUD (TLC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7E3_GLOUD)

HSP 1 Score: 145 bits (365), Expect = 1.130e-39
Identity = 77/163 (47.24%), Postives = 102/163 (62.58%), Query Frame = 0
Query:    8 LVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEV 170
            L+PL ST      FS S GYFLFDL V++ W +P+W VFV HH+VA  PY+I  F   C    Y+L LFLLVE + +PLN   FLE LG  +TP H+    + Y  WF  R++LPLY + ++W +I    S    C++P+ VC H+I  FCVGVF F+ TP+V
Sbjct:   78 LMPLRSTTAATALFSFSCGYFLFDLYVLVRWQVPLWRVFVIHHIVAAVPYLIYNFHAGCGMDFYLLSLFLLVELAVIPLNITTFLEQLGYGKTPVHQLFFFSTYVFWFGARVVLPLYNVYVLWERIIPESSDAPFCVIPAAVCGHLIAAFCVGVFVFVWTPDV 240          
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A3F2RIU2_9STRA (TLC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIU2_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.980e-39
Identity = 75/163 (46.01%), Postives = 100/163 (61.35%), Query Frame = 0
Query:    8 LVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEV 170
            L+PL  T      FS S GYFLFDL V++ W +P+W VFV HH+VA+ PY+I      C    Y+L LFL+VE + +PLN   FLE LG  ++  H +     Y+ WFV R+LLPLY + ++WTK+  +      C VP+  C HII  FCVGVF F+ TP+V
Sbjct:   77 LLPLNDTHFTSTLFSFSCGYFLFDLFVLVLWQVPLWRVFVVHHIVAVVPYLIYTMHSGCGMDLYLLQLFLMVEFAVIPLNIATFLEQLGYGKSKLHSFFFYTTYACWFVARVLLPLYNVYVLWTKVIPDAGAAPFCTVPAAFCGHIIAAFCVGVFIFVWTPDV 239          
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A1V9ZF67_9STRA (TLC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZF67_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.110e-37
Identity = 75/150 (50.00%), Postives = 99/150 (66.00%), Query Frame = 0
Query:   21 FSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEV 170
            FSI+IGYFL DL V+L W + M  VFV HH+VA+ PY+I  F   C   Q+ LLLFLLVE +T+PLNA  F+E +GR  +P+H  +  A Y  W V R LLP+YLL + W+        ++ C  P+++CAHII  FCVGVF F+ TPE+
Sbjct:   99 FSIAIGYFLCDLIVVLAWPVQMQYVFVIHHIVAVIPYIINNFVSACTGCQFGLLLFLLVEIATLPLNARGFMESMGRANSPQHTRSIYATYVTWAVTRTLLPVYLLYVFWSFSYPADKDDDVCFYPNLICAHIIAAFCVGVFCFVHTPEI 248          
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A067BSF7_SAPPC (TLC domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSF7_SAPPC)

HSP 1 Score: 140 bits (352), Expect = 1.140e-37
Identity = 75/150 (50.00%), Postives = 98/150 (65.33%), Query Frame = 0
Query:   21 FSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEV 170
            FSI+IGYFLFDL V++ W +PM  VFV HH+VA+ PY+I  F   C   Q+ LLLFLLVE +T+PLNA  F+E +GR  +  H  +  A Y  W V R LLP+YLL + W+        +  C  P+++CAHII  FCVGVF F+ TPE+
Sbjct:  100 FSIAIGYFLFDLIVVIAWPVPMQWVFVIHHIVAVVPYIINNFVSACTGCQFGLLLFLLVEIATLPLNARGFMESMGRHDSLSHTRSIYATYVTWAVTRTLLPVYLLYVFWSFSYPADKDDNVCFYPNLICAHIIAAFCVGVFCFVHTPEI 249          
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: H3H5E5_PHYRM (TLC domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5E5_PHYRM)

HSP 1 Score: 139 bits (350), Expect = 2.800e-37
Identity = 76/165 (46.06%), Postives = 101/165 (61.21%), Query Frame = 0
Query:    8 LVPLGSTVLLEIT--FSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEV 170
            L+PL  T +   T  FS S GYFLFDL V++ W +PMW VFV HHVVA  PY+I      C    Y+L LFL+VE + +PLN   F+E LG  +T  H++     Y  WF+ R++LP+Y + ++WTKI  +      C VP+  C HII  FCVGVF F+ TP+V
Sbjct:   77 LLPLKDTPMYLATTLFSFSCGYFLFDLFVLVLWQVPMWRVFVIHHVVAALPYLIYTMHAGCGMDLYLLQLFLMVEFAVIPLNITTFMEQLGYGKTKTHKFFFYTTYLFWFLARVILPIYNVYVLWTKIIPDAGAAPLCTVPAAFCGHIICAFCVGVFVFVWTPDV 241          
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A2D4CCG7_PYTIN (TLC domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCG7_PYTIN)

HSP 1 Score: 138 bits (347), Expect = 4.330e-37
Identity = 72/160 (45.00%), Postives = 99/160 (61.88%), Query Frame = 0
Query:   10 PLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPE 169
            P  ST L    FS S GYF+FDL V++ W +P+W VFV HH+VA+ PY+I  F+  C    Y+L LFLLVE + +PLN   FLE LG  +T  H       Y  WF  R++LPLY + ++W  +   +S+   C++PS +C H+I  FCVGVF F+ TP+
Sbjct:   75 PQRSTDLARTLFSYSCGYFIFDLYVLVRWQVPLWRVFVVHHIVAVIPYLIYNFYPGCGMDLYLLTLFLLVELAVIPLNITMFLEQLGFGKTRVHTIFFYITYVCWFGARVVLPLYNVYVLWWMVMPYLSSVPFCIIPSAICGHLIAAFCVGVFIFIWTPD 234          
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: W2N5N5_PHYPR (TLC domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2N5N5_PHYPR)

HSP 1 Score: 137 bits (345), Expect = 1.550e-36
Identity = 74/159 (46.54%), Postives = 98/159 (61.64%), Query Frame = 0
Query:   16 LLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQG----QYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEV 170
            L  I FS S GYFLFDL V++ W +P+W VFV HH+VA  PY+I    YT H G     Y+L LFL+VE + +PLN   F+E LG  ++  H +     Y  WFV R+LLP+Y + ++WTKI  +      C VP+  C HII  FC+GVF F+ TP+V
Sbjct:   87 LATILFSFSCGYFLFDLFVLVLWQVPLWRVFVIHHIVAALPYMI----YTTHAGCGMDLYLLQLFLMVEFAVIPLNITTFMEQLGYGKSKTHEFFFYMTYVFWFVARVLLPIYNVYVLWTKIIPDAGAAPLCTVPAAFCGHIIAAFCIGVFIFVWTPDV 241          
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A484DRY6_BRELC (TLC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRY6_BRELC)

HSP 1 Score: 136 bits (342), Expect = 6.480e-36
Identity = 70/150 (46.67%), Postives = 94/150 (62.67%), Query Frame = 0
Query:   21 FSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEV 170
            FS S GYFLFDL V++ W +P+W VFV HHVVA+ PY+I      C    Y+L LFL+VE + +PLN    LE LG  ++  H +     Y  WFV R+LLP+Y + ++WTK+  + +    C VP+  C HII  FCVGVF F+ TP+V
Sbjct:  110 FSFSCGYFLFDLVVLVLWQVPLWRVFVIHHVVAVLPYLIYTMHAGCGMDLYLLQLFLMVEFAVIPLNITTVLEQLGYGQSKTHEFFFYTTYLFWFVARVLLPIYNVYVLWTKVIPDAAVAPICTVPAAFCGHIIAAFCVGVFVFVWTPDV 259          
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A8K1FIF5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIF5_PYTOL)

HSP 1 Score: 134 bits (338), Expect = 1.000e-35
Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 0
Query:   10 PLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPE 169
            PL  T + ++ FS S GYF+ DL V++ W +PMW VFV HH+VA TPY+I  F+  C    Y+L LFLLVE + +PLN   F+E LG  +T  H       Y  WF  R++LPLY + ++W  +    S    C++PS +C H+I  FCVGVF F+ TP+
Sbjct:   77 PLLPTDVAQMFFSFSCGYFIADLYVLVCWQVPMWRVFVIHHLVAATPYLIFNFYPGCGMDFYLLTLFLLVEIAVVPLNIATFVEQLGYGKTRLHTLLFYMTYVCWFGARVVLPLYNVYILWWVLIPQASDAPLCIIPSAICGHLIAAFCVGVFVFVWTPD 236          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDE1_ECTSI3.460e-11198.25TLC domain-containing protein n=2 Tax=Ectocarpus T... [more]
K3W7E3_GLOUD1.130e-3947.24TLC domain-containing protein n=1 Tax=Globisporang... [more]
A0A3F2RIU2_9STRA5.980e-3946.01TLC domain-containing protein n=3 Tax=Phytophthora... [more]
A0A1V9ZF67_9STRA1.110e-3750.00TLC domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A067BSF7_SAPPC1.140e-3750.00TLC domain-containing protein n=2 Tax=Saprolegnia ... [more]
H3H5E5_PHYRM2.800e-3746.06TLC domain-containing protein n=1 Tax=Phytophthora... [more]
A0A2D4CCG7_PYTIN4.330e-3745.00TLC domain-containing protein n=2 Tax=Pythium insi... [more]
W2N5N5_PHYPR1.550e-3646.54TLC domain-containing protein n=12 Tax=Phytophthor... [more]
A0A484DRY6_BRELC6.480e-3646.67TLC domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A8K1FIF5_PYTOL1.000e-3544.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 14..170
e-value: 7.4E-14
score: 51.9
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 1..172
score: 13.485
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 12..156
NoneNo IPR availablePANTHERPTHR13439:SF0TOPOISOMERASE I DAMAGE AFFECTED PROTEIN 4coord: 12..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 92..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8678contigEcto-sp13_S_contig8678:579..2904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8678.20128.1mRNA_Ecto-sp13_S_contig8678.20128.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8678 516..3511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8678.20128.1 ID=prot_Ecto-sp13_S_contig8678.20128.1|Name=mRNA_Ecto-sp13_S_contig8678.20128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
MSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHH
VVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRT
PEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVC
AHIIVVFCVGVFFFLLTPEVYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom