prot_Ecto-sp13_S_contig8672.20122.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8672.20122.1
Unique Nameprot_Ecto-sp13_S_contig8672.20122.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length155
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8672.20122.1 vs. uniprot
Match: D7G5H4_ECTSI (Similar to TESK1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H4_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.090e-45
Identity = 87/98 (88.78%), Postives = 92/98 (93.88%), Query Frame = 0 
Query:    1 MRTHWHSPSSNKNLVQATTKLQRAWISLLTSLFGYILSALLHMAHRQDEVAKNGDDILKLLELVSIEVGVKSGAMSKDALKSEVARKKKNLDKLNAVR 98
            MRT+WHS SSNK LVQATTKLQRAWISLLT LFGYILSALLH+A RQD+VAKNGDDILKLLELVS+EVGVKSGAMSKDALKSEVAR KKNLD LNAV+
Sbjct:  107 MRTYWHSTSSNKKLVQATTKLQRAWISLLTPLFGYILSALLHIAERQDQVAKNGDDILKLLELVSVEVGVKSGAMSKDALKSEVARMKKNLDNLNAVK 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8672.20122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5H4_ECTSI1.090e-4588.78Similar to TESK1 protein n=1 Tax=Ectocarpus silicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..44
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8672contigEcto-sp13_S_contig8672:3964..4832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8672.20122.1mRNA_Ecto-sp13_S_contig8672.20122.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8672 729..4871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8672.20122.1 ID=prot_Ecto-sp13_S_contig8672.20122.1|Name=mRNA_Ecto-sp13_S_contig8672.20122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp
MRTHWHSPSSNKNLVQATTKLQRAWISLLTSLFGYILSALLHMAHRQDEV
AKNGDDILKLLELVSIEVGVKSGAMSKDALKSEVARKKKNLDKLNAVRES
SQRTSARRLNNSTSLRPAPYRLWNTVANRPCRTPSHFSILEGGLTRPATP
ASAS*
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