prot_Ecto-sp13_S_contig8632.20072.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8632.20072.1
Unique Nameprot_Ecto-sp13_S_contig8632.20072.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length358
Homology
BLAST of mRNA_Ecto-sp13_S_contig8632.20072.1 vs. uniprot
Match: D8LU56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU56_ECTSI)

HSP 1 Score: 655 bits (1690), Expect = 2.250e-236
Identity = 328/353 (92.92%), Postives = 343/353 (97.17%), Query Frame = 0
Query:    1 MKAVISALGLLAHSCFTNAAYVATIDIANCADLLTAADALSGGDIEANIVEADIACDEWTTVEVGQNKLKFVGSGATITSARFVVAAGAVLRADVPLVFTGDQTQTVNGGLLNVADGGKARFLDSVAMNNVGVLSVSEEAMVHGGCVYNEGLIRFEGTFSADGCKTVSSDTASIIPGNGGGLWNGPGGKIVFKEAVEMENCGERTWLKNWSSEGLDGGAIYTDGKVSFYDDAQFTDNEADEGGAIFIGIDGELKFLKRAKVTFTGNNSEGSGGHVNNDGTLVLRNTGVFSDGYAGGSGGAIYARSFSSMLFVKHVDFLDNTAGAHGGAIATNYPNIDDLPEDATYEGNSRTNV 353
            MKAVISALGLLAHSCFTNA YVATIDIA+CADLLTAADALSGGDIEANI+EADIACDEWTTVEVGQNKLKFVGSGAT TSARFVVAAGAVLRADVPLV TGDQTQ VNGGLLNVADGGKARFLDSVAMN+VGVLSVSEEAMVHGGCVYNEGLIRFEGTFSADGCKTVSSDTAS+IPG+GGGLWNGPGGKIVFKEAVEM+NCGERT L++W S+GLDGGAIYTDGKVSFY+DAQFTDNEADEGGAI IG+DGELKFLK+AKVTFTGNNSEGSGGH+NNDGTLVLRNTGVFSDGYAGGSGGAIYA  FSSMLFVKHVDFLDNTAGAHGGAIAT+YPNIDDLPEDATY+GNSRTN 
Sbjct:    1 MKAVISALGLLAHSCFTNAVYVATIDIASCADLLTAADALSGGDIEANIMEADIACDEWTTVEVGQNKLKFVGSGATFTSARFVVAAGAVLRADVPLVLTGDQTQAVNGGLLNVADGGKARFLDSVAMNDVGVLSVSEEAMVHGGCVYNEGLIRFEGTFSADGCKTVSSDTASVIPGDGGGLWNGPGGKIVFKEAVEMKNCGERTGLRSWRSQGLDGGAIYTDGKVSFYEDAQFTDNEADEGGAICIGVDGELKFLKKAKVTFTGNNSEGSGGHINNDGTLVLRNTGVFSDGYAGGSGGAIYAGDFSSMLFVKHVDFLDNTAGAHGGAIATSYPNIDDLPEDATYQGNSRTNA 353          
BLAST of mRNA_Ecto-sp13_S_contig8632.20072.1 vs. uniprot
Match: D7G627_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G627_ECTSI)

HSP 1 Score: 418 bits (1074), Expect = 1.750e-142
Identity = 217/367 (59.13%), Postives = 266/367 (72.48%), Query Frame = 0
Query:    1 MKAVISALGLLAH-SCFTNAAYVATIDIANCADLLTAADALSGGDIEANIVEADIACDEWTTVEVGQNKLKFVGSGATITSARFVVAAGAVLRADVPLVFTGDQT------------QTVNGGLLNVADGGKARFLDSVAMNNVGVLSVSEEAMVHGGCVYNEGLIRFEGTFSADGCKTVSSDTASIIPGNGGGLWNGPGGKIVFKEAVEMENC-GERTWLKNWSSEGLDGGAIYTDGKVSFYDDAQFTDNEADEGGAIFIGIDGELKFLKRAKVTFTGNNSEGSGGHVNNDGTLVLRNTGVFSDGYAGGSGGAIYARSFSSMLFVKHVDFLDNTAGAHGGAIATNYPNIDDLPEDATYEGNSRTNV 353
            MK+ ++    L+H + F NAAYVA +DIA+CADL +AA ALSGG+IE  +VE++I CD+WTTVE+ QNKLK  G   T TS RFVVA GA+LR D  + FTGDQ             + VNGG+LNVA  G ARFLDSV M +VGV +V ++ M HGGC+YNEG +RFEGTF+AD C+  S  TA   PGNGG LWNGP  K+VFKEAVEM NC G++T   N    GL+GGA+YT+GK+SFY+DA FTDNE DEGGA++IG+   +KFLKR+K TF  N SE  GGH+ N+G LV+RNT VF DG +G SGGAI A   S M+F+KHVDF+ N+A AHGGAIAT YPNI+ LP+DATYEGN   N 
Sbjct:    1 MKSAVATAVFLSHLASFVNAAYVAQMDIASCADLQSAAGALSGGNIEGVLVESEITCDDWTTVEISQNKLKLTGQATTFTSVRFVVADGAILRVDTAVEFTGDQERRQGDGLAPAFLEAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFEGTFTADACRVGS--TAEKYPGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGVTAVVKFLKRSKATFARNTSENRGGHIMNEGVLVMRNTAVFEDGVSGSSGGAINAGDVSEMVFIKHVDFIGNSADAHGGAIATTYPNIEFLPQDATYEGNVLQNA 365          
BLAST of mRNA_Ecto-sp13_S_contig8632.20072.1 vs. uniprot
Match: D7FSQ1_ECTSI (Adhesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ1_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 8.280e-110
Identity = 187/362 (51.66%), Postives = 245/362 (67.68%), Query Frame = 0
Query:    1 MKAV-ISALGLLAHSCFTNAAYVATIDIANCADLLTAADALSG-GDIEANIVEADIACDEWTTVEVGQNKLKFVGS-GAT--ITSARFVVAAGAVLRADVPLVFTGDQTQTVNGGLLNVADGGKARFLDSVAMNNVGVLSVSEEAMVHGGCVYNEGLIRFEGTFSADGCKTVSS--DTASIIPGNGGGLWNGPGGKIVFKEAVEMENCGERTWLKNWSSEGLDGGAIYTDGKVSFYDDAQFTDNEADEGGAIFIGIDGELKFLKRAKVTFTGNNSEGSGGHVNNDGTLVLRNTGVFSDGYA-GGSGGAIYARSFSSMLFVKHVDFLDNTAGAHGGAIATNYPNIDDLPEDATYEGNSRTNVS 354
            MK V ++A+G  A S     A    +DI+NCA+L  AA+A +  G++   +VE +I CDEW +VE+ +NKLK  G  G T      RFVV +GA+LR DVP+ FTGD+TQ V+GG+LNV +GGKARFL SV+M+ +GV +V    M HGGCVYN+G +RFEG F A+GC+TVS+  +    + GNG G+WNG   K+VFKEAVEM+ CG   W  N +  G DGGAIY+DG+VSF++DA FT+NEADEGGA++IG+ G +KFLK AK TF  N+  G+GG +NN G LV+RNT  F+ G +  GSGG I     S M+FVK+V F    +  HG AI  +Y N++ LPEDATY  N   N S
Sbjct:    1 MKQVAVAAIGAAALSAAGCMAAPTPMDISNCAELQAAAEATATVGNVLGQLVEEEIFCDEWLSVEIPENKLKLDGDDGVTYKFDKVRFVVKSGAILRVDVPVEFTGDRTQVVHGGVLNVEEGGKARFLSSVSMDGIGVDTVDLADMKHGGCVYNQGYVRFEGEFYANGCETVSTIEEYRVAMAGNGAGIWNGKDAKVVFKEAVEMDFCGNWPWTSNGAEPGSDGGAIYSDGEVSFFEDALFTNNEADEGGALWIGVTGVVKFLKSAKATFQSNSGPGNGGTINNYGVLVMRNTASFNQGRSTDGSGGCISCGPASEMVFVKNVLFDGCQSTEHGAAIYIDYDNVEFLPEDATYTDNFIVNNS 362          
BLAST of mRNA_Ecto-sp13_S_contig8632.20072.1 vs. uniprot
Match: A0A6H5L171_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L171_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 8.170e-103
Identity = 157/250 (62.80%), Postives = 189/250 (75.60%), Query Frame = 0
Query:  105 QTVNGGLLNVADGGKARFLDSVAMNNVGVLSVSEEAMVHGGCVYNEGLIRFEGTFSADGCKTVSSDTASIIPGNGGGLWNGPGGKIVFKEAVEMENC-GERTWLKNWSSEGLDGGAIYTDGKVSFYDDAQFTDNEADEGGAIFIGIDGELKFLKRAKVTFTGNNSEGSGGHVNNDGTLVLRNTGVFSDGYAGGSGGAIYARSFSSMLFVKHVDFLDNTAGAHGGAIATNYPNIDDLPEDATYEGNSRTNV 353
            Q VNGG+LNVA  G ARFLDSV M +VGV +V ++ M HGGC+YNEG +RFEGTF+AD C+  S  TA   PGNGG LWNGP  K+VFKEAVEM NC G++T   N    GL+GGA+YT+GK+SFY+DA FTDNE DEGGA++IG  G +KFLKR+K TF  N SE  GGH+ N+G LV+RNT VF DG +G SGGAI A   S M+F+KHV+F+ N+A AHGGAIAT YPNI+ LP+DATYEGN   N 
Sbjct:   12 QAVNGGVLNVAPEGYARFLDSVKMYSVGVNTVEDDTMQHGGCIYNEGYVRFEGTFTADACRVGS--TAEKYPGNGGALWNGPDAKVVFKEAVEMTNCYGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGGTGVVKFLKRSKATFARNTSENRGGHIMNEGVLVMRNTAVFEDGVSGSSGGAINAGDASEMVFIKHVNFIGNSADAHGGAIATTYPNIEFLPQDATYEGNVLQNA 259          
BLAST of mRNA_Ecto-sp13_S_contig8632.20072.1 vs. uniprot
Match: A0A6H5L6W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6W4_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 4.320e-40
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0
Query:   29 NCADLLTAADALSGGDIEANIVEADIACDEWTTVEVGQNKLKFVGSGATITSARFVVAAGAVLRADVPLVFTGDQTQTV 107
            +CADLLTAADALSGGDIEANIVEADIACDEWTTVEVGQNKLKFVGSGAT TSARFVVAAGAVLRADVPLVFTGDQTQ +
Sbjct:    4 SCADLLTAADALSGGDIEANIVEADIACDEWTTVEVGQNKLKFVGSGATFTSARFVVAAGAVLRADVPLVFTGDQTQVL 82          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8632.20072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LU56_ECTSI2.250e-23692.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G627_ECTSI1.750e-14259.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSQ1_ECTSI8.280e-11051.66Adhesin-like protein n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A6H5L171_9PHAE8.170e-10362.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6W4_9PHAE4.320e-4094.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..357
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.685
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 41..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8632contigEcto-sp13_S_contig8632:1016..6726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8632.20072.1mRNA_Ecto-sp13_S_contig8632.20072.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8632 1016..6726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8632.20072.1 ID=prot_Ecto-sp13_S_contig8632.20072.1|Name=mRNA_Ecto-sp13_S_contig8632.20072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=358bp
MKAVISALGLLAHSCFTNAAYVATIDIANCADLLTAADALSGGDIEANIV
EADIACDEWTTVEVGQNKLKFVGSGATITSARFVVAAGAVLRADVPLVFT
GDQTQTVNGGLLNVADGGKARFLDSVAMNNVGVLSVSEEAMVHGGCVYNE
GLIRFEGTFSADGCKTVSSDTASIIPGNGGGLWNGPGGKIVFKEAVEMEN
CGERTWLKNWSSEGLDGGAIYTDGKVSFYDDAQFTDNEADEGGAIFIGID
GELKFLKRAKVTFTGNNSEGSGGHVNNDGTLVLRNTGVFSDGYAGGSGGA
IYARSFSSMLFVKHVDFLDNTAGAHGGAIATNYPNIDDLPEDATYEGNSR
TNVSVNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence