mRNA_Ecto-sp13_S_contig8629.20068.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8629.20068.1
Unique NamemRNA_Ecto-sp13_S_contig8629.20068.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A6H5KSL6_9PHAE (V-SNARE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL6_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 1.120e-103
Identity = 173/182 (95.05%), Postives = 175/182 (96.15%), Query Frame = 1 
Query:    1 VKGMEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLAR---SRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRSLV 537
            VKGMEIE RSMKGNERRQCQSRANQCRADLK LRRSIDQAGQRAQAEELMRRSGGGAIGG PR+FSEGGGDL GLGPDLAQQSLAR   SRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRSL+
Sbjct:   63 VKGMEIEARSMKGNERRQCQSRANQCRADLKALRRSIDQAGQRAQAEELMRRSGGGAIGGEPRSFSEGGGDLRGLGPDLAQQSLARRVLSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRSLL 244
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A835ZAL4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 7.410e-33
Identity = 82/175 (46.86%), Postives = 106/175 (60.57%), Query Frame = 1 
Query:    1 VKGMEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRR 525
             +GMEIEVRSM G +R++C ++A Q R+DL  LRR+ DQA  RA  E                           LG D   ++LAR+ +SL DSRRVL ETE +G  V+ DLE QR+SLLR+R + R+      +AR +L +I+RR+ RHRL LYA+IA L  AI FVLYLK RR
Sbjct:   81 ARGMEIEVRSMTGADRKKCGAKAAQYRSDLLALRRAFDQARARAARE---------------------------LGYDGGGRALARTAISLTDSRRVLAETEDVGARVVTDLEGQRQSLLRARDNAREISYDTVEAREVLRAIARRDARHRLALYAIIAALLCAIAFVLYLKFRR 228
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A6U4L7W0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L7W0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.240e-18
Identity = 62/171 (36.26%), Postives = 93/171 (54.39%), Query Frame = 1 
Query:    1 VKGMEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLA------RSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAI 495
            VK ME+EVRS++G  ++ CQ +  + R DL  L+R I++A          R +GGGA   G  + +      GG+    AQ  L        S   L+ +RRV+ +TE +G  +M +LE Q+E+L+R+   VR+T     +A+R+L  +  R L H LCLY VI +L A I
Sbjct:   53 VKAMEVEVRSLRGPVKKSCQQKLERYRNDLGSLKREIERA----------RLTGGGARQAGEVSLAP---SQGGMSAQRAQMMLETNDILDESTAQLEQTRRVIADTEQVGDNIMSNLEEQKETLVRAHDDVRETRGITREAQRVLRMMGNRALMHTLCLYVVILILLALI 210
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: W7U7D0_9STRA (Qb-vti1-family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7D0_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 9.650e-17
Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = 1 
Query:    1 VKGMEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALL 483
            VKG+EIEV+ M   ++R C+ +  Q R DLK +RRS + A  RA+   L++ S    + G  +N +E                L  S   L D+R+V++ETE IG G++  +E+QRE L+R+   V++T      AR+++ ++  R +RH+ CL  +I  L
Sbjct:   60 VKGLEIEVQDMPVKDKRMCREKVLQFRNDLKAMRRSFEAAKARAERHMLLQLS---QVSGKRKNIAE---------------RLMSSTEQLHDARKVVDETEHIGEGIIYQMEAQREQLVRASEQVQETNWFTRSARQVMNNMHLRAVRHKACLILIIGFL 202
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A6T7FTV7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7FTV7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.950e-16
Identity = 62/180 (34.44%), Postives = 99/180 (55.00%), Query Frame = 1 
Query:    1 VKGMEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIG----GGPRNF---SEGGGDLGGLGPDLAQQSLA-RSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLK 516
            ++ ME  ++S++G ER   +   ++C+ D + L+  +++A   A + EL   SGG        GG + +   + G GD G  GP  A  +   R    L++SRR++ ETE IG  VMGD+E+QR  LL +   V +T      AR+ L ++  REL+H+  L A+I LL A+I  VL+ +
Sbjct:   28 LRRMEAAIQSLEGPERTSREQAVSRCKQDFQSLKNELNRALNNADSAELTGMSGGSXXXXVRRGGGQGYQPPTSGAGDWG--GPSSAPPTTGVRGTELLEESRRIIGETEEIGDQVMGDMENQRHQLLSAHEKVLETRGFISDARQTLSTMGWRELQHKAMLVAIIILLFASICLVLWFR 205
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A7S1C7L7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7L7_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.730e-13
Identity = 56/165 (33.94%), Postives = 89/165 (53.94%), Query Frame = 1 
Query:    1 VKGMEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAI 495
            V+ ME+E RS+  +E+R+   R    RA+L   R  +++A  R   + LM      A+    R  +   G +     + A   + RS   L+++RR + ETE +G G+MG+L SQRE+LLR+   V++T     +ARR+L +I RR   ++  L+ VI  L  AI
Sbjct:   60 VQAMELEARSVAPSEKRRLTGRIRTYRAELSAARTDLERAQTRGDRDALMAGGSRDAV---SRESASQRGRI-----EEATARMDRSTAVLEETRRTVMETEEVGVGIMGNLHSQRETLLRAHDKVKETNRLTTRARRVLNNIKRRACYNQALLWVVILFLLGAI 216
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A484E001_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E001_BRELC)

HSP 1 Score: 73.6 bits (179), Expect = 1.640e-12
Identity = 60/177 (33.90%), Postives = 91/177 (51.41%), Query Frame = 1 
Query:    1 VKGMEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRS 531
            +K M +EVR  +   R+  Q++ N  R +L+ L R I++A       +LM + G        +N      +        +   L +S + L+D+ R++ ETE +G  V+  L SQRE LL S   VR+TGA   +ARRLL  ++RR L + + LY  I +L  AI +VLY    R S
Sbjct:   88 IKLMTVEVRGRQPMLRKAMQTKVNLYREELQGLIRDIERA-------QLMAKEGSAVS---SKNSQASHYER----LTKSTDRLTQSSMKLEDTHRIVAETEEVGIAVLDTLASQRERLLESHDKVRETGAMLTEARRLLQRMTRRILTNTIVLYTTIFILGVAICYVLYADFIRTS 250
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A835WA92_CHLIN (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WA92_CHLIN)

HSP 1 Score: 71.2 bits (173), Expect = 2.710e-12
Identity = 55/182 (30.22%), Postives = 97/182 (53.30%), Query Frame = 1 
Query:   10 MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLA-RSRL------------SLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLK 516
            M+ E RS+  + ++Q Q++  + RADL  L+  + +A  R+   +                F  G  +LG LG D A  S A R R+             L+  +++L ETE +G G++ +L SQRE+++RSR ++        +AR++L S+S+R L+++L ++ +I  L AAI+ ++Y K
Sbjct:    1 MDNEARSVAPDRQKQLQNKVKEYRADLASLKEQLQKA--RSSTSD----------------FESGRAELG-LGMDYASSSSAQRDRMLSATAKLEQSDERLKQGKQLLAETEDLGAGILQNLHSQRETIVRSRDTLHGADDNITKARKILSSMSKRMLQNKLIMFGIIGTLLAAIILIIYFK 163
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A0W8DN76_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DN76_PHYNI)

HSP 1 Score: 69.7 bits (169), Expect = 5.780e-12
Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 1 
Query:  226 GPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLY 510
            G ++A    A+S   L+D+ R++ ETE +G  V+  L SQRESLL +   VR+TGA   +ARR+L  ++RR + + + LY  I +L  AI +V+Y
Sbjct:   34 GGEIAATCAAQSSKKLEDTHRIVAETEEVGIAVLDTLASQRESLLGAHEKVRETGAMTTEARRILQRMTRRIITNTIVLYTTIFVLIVAICYVIY 128
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BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A024TJZ2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJZ2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.060e-11
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 1 
Query:  250 LARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRS 531
            L R+   L+ S+R+++ETE IG  VM  L  QRE+LL +   V+DT   AG ARR+L  +S+R L H+L L+ VI +L  AIV V Y    +RS
Sbjct:  129 LQRASDQLEQSKRIVQETEQIGISVMDTLAQQRETLLSAHDKVKDTRETAGDARRVLQRMSQRMLTHKLTLWFVILVLIVAIVLVFYHDFIKRS 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL6_9PHAE1.120e-10395.05V-SNARE domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZAL4_9STRA7.410e-3346.86Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A6U4L7W0_9STRA2.240e-1836.26Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7U7D0_9STRA9.650e-1734.16Qb-vti1-family n=1 Tax=Nannochloropsis gaditana Ta... [more]
A0A6T7FTV7_9STRA2.950e-1634.44Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1C7L7_9STRA1.730e-1333.94Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A484E001_BRELC1.640e-1233.90Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A835WA92_CHLIN2.710e-1230.22t-SNARE coiled-coil homology domain-containing pro... [more]
A0A0W8DN76_PHYNI5.780e-1241.05Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A024TJZ2_9STRA1.060e-1145.74t-SNARE coiled-coil homology domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8629contigEcto-sp13_S_contig8629:3255..5847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score312.8
Seed ortholog evalue1e-82
Seed eggNOG ortholog2880.D8LHK7
Preferred nameVTI1A
Model size553
KEGG koko:K08493,ko:K08494,ko:K10406,ko:K18749
KEGG Pathwayko04130,ko04138,map04130,map04138
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000149,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000331,GO:0002576,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005767,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005798,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006891,GO:0006892,GO:0006896,GO:0006904,GO:0006906,GO:0006914,GO:0006996,GO:0007030,GO:0007033,GO:0007034,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008200,GO:0008283,GO:0009056,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016247,GO:0016248,GO:0016482,GO:0017081,GO:0019869,GO:0022406,GO:0030133,GO:0030134,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030173,GO:0030424,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031091,GO:0031093,GO:0031201,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031901,GO:0031902,GO:0031974,GO:0031982,GO:0031983,GO:0031984,GO:0032010,GO:0032501,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0033365,GO:0034613,GO:0034774,GO:0036477,GO:0042144,GO:0042147,GO:0042175,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043679,GO:0044237,GO:0044248,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045324,GO:0045335,GO:0046903,GO:0046907,GO:0048193,GO:0048278,GO:0048280,GO:0048284,GO:0048471,GO:0050789,GO:0050879,GO:0050881,GO:0050882,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051649,GO:0055037,GO:0055038,GO:0060205,GO:0060341,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0065009,GO:0070013,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090161,GO:0090174,GO:0097458,GO:0097576,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:0099106,GO:0099503,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0150034,GO:1903076,GO:1903827,GO:1904375,GO:1905475
Exons3
EggNOG free text desc.vesicle fusion with Golgi apparatus
EggNOG OGsKOG1666@1,KOG1666@2759
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-10_002250.1
Cds size531
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04131,ko04812
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464135.569988-UTR-Ecto-sp13_S_contig8629:3254..32671681464135.569988-UTR-Ecto-sp13_S_contig8629:3254..3267Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8629 3255..3267 -
1681464135.6251981-UTR-Ecto-sp13_S_contig8629:5838..58471681464135.6251981-UTR-Ecto-sp13_S_contig8629:5838..5847Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8629 5839..5847 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464135.5913975-CDS-Ecto-sp13_S_contig8629:3267..35501681464135.5913975-CDS-Ecto-sp13_S_contig8629:3267..3550Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8629 3268..3550 -
1681464135.6053035-CDS-Ecto-sp13_S_contig8629:4918..50581681464135.6053035-CDS-Ecto-sp13_S_contig8629:4918..5058Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8629 4919..5058 -
1681464135.6152263-CDS-Ecto-sp13_S_contig8629:5730..58381681464135.6152263-CDS-Ecto-sp13_S_contig8629:5730..5838Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8629 5731..5838 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8629.20068.1prot_Ecto-sp13_S_contig8629.20068.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8629 3268..5838 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8629.20068.1

>prot_Ecto-sp13_S_contig8629.20068.1 ID=prot_Ecto-sp13_S_contig8629.20068.1|Name=mRNA_Ecto-sp13_S_contig8629.20068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp
MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRS
GGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEG
IGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLC
LYAVIALLSAAIVFVLYLKIRRRSLV*
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mRNA from alignment at Ecto-sp13_S_contig8629:3255..5847-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8629.20068.1 ID=mRNA_Ecto-sp13_S_contig8629.20068.1|Name=mRNA_Ecto-sp13_S_contig8629.20068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2593bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8629:3255..5847- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGAAGGGCATGGAGATCGAAGTCCGTTCGATGAAGGGTAACGAGCGGCG
TCAGTGCCAGAGCAGAGCCAACCAGTGCCGGGCCGACTTGAAAGATCTAC
GCAGGAGCATAGACCAGGTGCGTGCGCTCAATTCTAACTCCATGAGCGGA
CAAGAGCATCGACTACCGATTTACGCCCGCACTTGAGAAGTTGGCAGTTT
AAAAATTCATGCTCAGCATTTTTTCAAACGTACTTCGAAACTTGAGAACT
GTTTGCGAGCCCGACAAAGACCCCCTTCACTAAAGCCTGTACATGTAGCG
GTCATGTGTAATCCCATAAGAGGAACTCAAACCCACAACCTCGACCAAAG
TTTGGAGGCGCTTCTTGGAACCGCACCGCTGCTGCTGCTTCTGCTGCTGC
TGCGGCAGGCAGCTCTGTCCGTTCTTTTTGTTTTTCGCGGGGCTCTCAGC
CTCTACACCCGAATGTTGTGTACGCGTGCGCGCCCACTCTGATTTTTCCT
TGTGTTGTTTGGCGGGGGTATTTTTCGGAATAAGTTATGCTTACACGTCT
TCATCCGGGCGTGTGCTGGTTAGCTGCACCTCGCGGTCTGCAGAACAGCG
GCGCGGTTCGGTGTTGACGGCGGGTTGGACATTTTAACATTCCCTCTCAA
GCAGGATACAAAAACGCGTTGGGGGTTTTCTCAAGGCCACCAGGAACCTC
CAACCATTGACTCCTTTTTTTTCCTCTTTTTTTTTCGTGTTATGTTGTGT
GCTGTTGTCCCACTTATTTTTTTTCAACGTTGTTGGCAGGCAGGGCAGCG
AGCCCAGGCGGAGGAGCTGATGCGTCGGAGTGGCGGCGGAGCAATCGGAG
GGGGACCGAGAAATTTCTCGGAAGGCGGTGGCGACCTAGGGGGGCTGGGC
CCGGATCTTGCGCAGCAGAGTCTCGCCAGGCGAGTTTTGTAAAAAAAACA
TGTTCATGCGTGTGTACAGTAGTTAGGGCCGGCACCTTAAGCACACCTTA
TTTTGGTCGAGGCTCTTGTTTTGTCTGTGGTGTGGACTACCCCCACGGCG
ATGATGAAGGTTTCAGCGTAGGCTTCTTGACTGGGGACCTACCTGTTCTT
GTGGCCAAGTCTTACATTTCGGAAAACATGAGACTACGTAGAGTTCTTGA
GCGCCGGCCGGTTCTGTATATATTGTAAGGCCATTGGTTGAGACGCCACA
CAAGCTCTTCGTTGATTCAGGACTGACCTCGACTAGGCAACGGTAAATTT
ATCGCCCAAGCAACGCCGCATTTTGTCTCGTATGTGCACGTTACACACGT
GAACCCGGACACTTCTCGACAACGAATCTGTCTTGTGTCTTTCTTCTACA
GTCCCATCCCATTTCGGGAGCCAATTCTACGTATCGAACACCTACCGGTT
TTGTTTGGCGCACAAGCCGTAGTCACACAGCACGGAAGGCCGACTTTTTT
CTCTTGTCTGCTTCGATTAGATACATAGATCAGGTAGTGAACCCCTTGTG
TACCCCTTTTTGGGCTGTTTTTGGGGTTGAGATTGGATTGGGGGCGACGC
ATGGCACCTTTTTCTGGGCGCACGTTCAACAAGCAAGCGCGCCACAGGAG
GATAGAGAAAAAGAAAAAAAGAAGTCCCGTACTCAAGAGTATTTCGTGTT
TTGATTCTGTCTTCCTCCTGTGGGCCCCCGGCTGGTGCGCCAAAACATGC
ACCGAAAAACGTAGTATCACGACCTGGATGAAAATGCACGGGACAAAGAA
AACACGGATGCACACGTTCAATCGTCTATGAGCTGTGCCTATTACGAAGA
CTCGTCCGTGCGTTGTGTGACGATGTGATGCGTAACGTTGTGTTGTAAAA
ATAGGATTGAAACGTCGCTACCTGTAGTCAATGATCGAAAATGACGAAGT
CGAGTGCACCCCCTCCCCATCCAATCCCGCACCCCGCATGGATCCGCGCC
CCGACCCCAAAGCCCGATCATTGTGAGAAGAACCGCCCCTTCCCGGTGTT
GCCTTATCGGCTGGGGGGACGTTACTTCGTGTCGAAAGGGATCGATGGTC
AGTGTTCACGACGACTTATTACATTATGCCAGCGAACGAGCGCCAAACTT
TTCCACACACTAGTCTACACCGTCTCTCGCAATAAGAAAACCGTTTTTTG
AGCAGCGACGACCAAACTATTGTACACATCCTCCTTGTGCAAGAGAATGG
AAAACGTATTGTTTTGTATGCATACTTTTTGAACATCGGAACACCCGGCA
ATTGTACCCACCTTTCTCTCGCAAAAAAAACGAACAAAAAAAAGCAGGAG
TCGATTGAGTCTTCAAGACTCTCGAAGAGTGCTGGAGGAGACCGAGGGCA
TCGGGCGCGGCGTCATGGGCGACCTGGAGTCGCAGCGGGAGTCCCTCCTG
CGCTCCCGGGCGAGCGTACGAGACACCGGGGCGGCCGCGGGGCAGGCGCG
GCGTCTGCTGGGGTCGATCTCCCGTCGGGAGCTGAGACACCGGCTGTGCC
TCTACGCTGTCATCGCCCTGCTGAGCGCGGCGATCGTTTTCGTCCTCTAC
CTCAAGATCCGACGGCGAAGTCTTGTGTGAAAAACTTTCCCTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8629:3255..5847-

>mRNA_Ecto-sp13_S_contig8629.20068.1 ID=mRNA_Ecto-sp13_S_contig8629.20068.1|Name=mRNA_Ecto-sp13_S_contig8629.20068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=531bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8629:3255..5847- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGATCGAAGTCCGTTCGATGAAGGGTAACGAGCGGCGTCAGTGCCA
GAGCAGAGCCAACCAGTGCCGGGCCGACTTGAAAGATCTACGCAGGAGCA
TAGACCAGGCAGGGCAGCGAGCCCAGGCGGAGGAGCTGATGCGTCGGAGT
GGCGGCGGAGCAATCGGAGGGGGACCGAGAAATTTCTCGGAAGGCGGTGG
CGACCTAGGGGGGCTGGGCCCGGATCTTGCGCAGCAGAGTCTCGCCAGGA
GTCGATTGAGTCTTCAAGACTCTCGAAGAGTGCTGGAGGAGACCGAGGGC
ATCGGGCGCGGCGTCATGGGCGACCTGGAGTCGCAGCGGGAGTCCCTCCT
GCGCTCCCGGGCGAGCGTACGAGACACCGGGGCGGCCGCGGGGCAGGCGC
GGCGTCTGCTGGGGTCGATCTCCCGTCGGGAGCTGAGACACCGGCTGTGC
CTCTACGCTGTCATCGCCCTGCTGAGCGCGGCGATCGTTTTCGTCCTCTA
CCTCAAGATCCGACGGCGAAGTCTTGTGTGA
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