prot_Ecto-sp13_S_contig12414.2005.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12414.2005.1
Unique Nameprot_Ecto-sp13_S_contig12414.2005.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length833
Homology
BLAST of mRNA_Ecto-sp13_S_contig12414.2005.1 vs. uniprot
Match: A0A6H5KXS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS5_9PHAE)

HSP 1 Score: 640 bits (1650), Expect = 3.020e-205
Identity = 431/551 (78.22%), Postives = 441/551 (80.04%), Query Frame = 0
Query:  197 RRMKGGGSGLLGTPRQQVSQGGLESAVAAAASGGAARSGVRSAAEMVVSAVLGWEKGLNASAXXXXXXXXXXXXXXKKVVSPRSSQALNNSVAMDKSAKEKSDEAXXXXXXXXXK--LEGTDVSF--------------------------------------------EGSGHSKRMIADGSTAALSTKAAGALINDGTKGLVAHPTPQAPREDDXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SVKSKKRLEEERAVAFRTVHRTLLSPVTHLSPANGGRPHAPAVFTKFAKPAVEKAKAIDRNNWNTLAQELARGSDDAAAAAHDSNQTGRLTVAATEERLGRGLQPAYLAREQQQQRQQHGKQQHQQDSLVAGREVHDGDAKAIKTSPDAMITLRISTASPSNDQLPRPPVPSPSHQEEHQRPPVHRRRQSDSNDGQSPLLQTSTELPQEGFYQIGGGSGFYLGQHIAGRNPASPIAASSRPAEAARATAMLEAGAAEATRTSPSPLAPVPEQRGVADAMVLDHGGQVTSCLPPSPPSFPLSRSTSG 700
            RRMKGGGS LL  PRQQVSQGGLESAVAAAA  GAARSGVRSAAE+ VSAV GWEKGLNAS  XXXXXXXXXXX  KK VSPR+SQALNN VA DK+ KEKSDEA         K  LEGTD SF                                            EG GH+KRMIADGSTAALSTK+A ALINDG KGLV H TPQA RED XXXXXXXXXXXXXXXXXXXXXXXXXXX  SVKSKKRLEEERAVAFRTVHRTLLSPVTHLSPANGGRPH PAVFTKFAKPAVEKAKAIDRNNWNTLAQELARGSDDAAAAAHD  QTGRLTVAATEERL RGLQPAYLA EQQQQ         QQD LV GREVHDGDAKAIKTSPDAMITLR+STASPSNDQLPRPPVPSPSHQ+E QR P+HR+ Q  SNDGQSPLLQTS ELPQEGFYQIGGGSG  LGQHIA RNPASPIAASSRPAE ARATAML AGAAEATRTSPSPLAPVPEQ+GVADAMVLDHGGQVTSC  PS PSFPLSRSTSG
Sbjct:  971 RRMKGGGSVLLCAPRQQVSQGGLESAVAAAAGVGAARSGVRSAAELAVSAVRGWEKGLNASTAXXXXXXXXXXX--KKAVSPRTSQALNNLVATDKNGKEKSDEAKRKAKKQQPKGKLEGTDASFGYGVCHPAWGRINPSTCRWRSPPVESSTLHVYPIPLDALKPSFTEGPGHAKRMIADGSTAALSTKSAEALINDGMKGLVVHRTPQAQREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSVKSKKRLEEERAVAFRTVHRTLLSPVTHLSPANGGRPHDPAVFTKFAKPAVEKAKAIDRNNWNTLAQELARGSDDAAAAAHDGKQTGRLTVAATEERLRRGLQPAYLAGEQQQQXXXXXXXXXQQDPLVTGREVHDGDAKAIKTSPDAMITLRVSTASPSNDQLPRPPVPSPSHQQEPQRLPLHRQ-QCGSNDGQSPLLQTSIELPQEGFYQIGGGSGCNLGQHIASRNPASPIAASSRPAETARATAMLGAGAAEATRTSPSPLAPVPEQQGVADAMVLDHGGQVTSCSHPSSPSFPLSRSTSG 1518          
BLAST of mRNA_Ecto-sp13_S_contig12414.2005.1 vs. uniprot
Match: D8LDK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK1_ECTSI)

HSP 1 Score: 583 bits (1502), Expect = 2.460e-188
Identity = 420/636 (66.04%), Postives = 432/636 (67.92%), Query Frame = 0
Query:    1 DEEQFFLGLGAKRLGKSTKRRLVECQTQITTALRGGRPVVPASWTPATAPTAGAAPXXXXXXXXXXVSSTPTKRPNKKQSQAXXXXXXXXXXXXXXXXXXXXGRSSATGDRAAKSPGASG-RSVLTNYPDDTHANGRTSNPNGMMRMNTPEASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRMKGGGSGLLGTPRQQVSQGGLESAVAAAASGGA---ARSGVRSAAEMVVSAVLGWEKGLNASAXXXXXXXXXXXXXXKKVVSPRSSQALNNSVAMDKSAKEKSDEAXXXXXXXXXKLEGTDVSFEGSGHSKRMIADGSTAALSTKAAGALINDGTKGLVAHPTPQAPREDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKSKKRLEEERAVAFRTVHRTLLSPVTHLSPANGGRPHAPAVFTKFAKPAVEKAKAIDRNNWNTLAQELARGSDDAAAAAHDSNQTGRLTVAATEERLGRGLQPAYLAREQQQQRQQHGKQQHQQDSLVAGREVHDGDAKAIKTSPDAMITLRISTASPSNDQLPRPPVPSPSHQEEHQRPPVHRRRQSDSNDGQSPLLQTSTELPQEGFYQIGGGSGFYLGQHIAGRNPASPIAAS 632
            DEEQFFLGLGAKRLGKSTKR                                                                                     SATGDRAAKSPGA G RS +TNYPD+TH NG TSNPNGMMRMNTPEASA                                     XXXXX RRMKG  S LLG PRQQVSQGGLE              ARSGVRSAAEM VSAVLGWEKGLNA+ XXXXXXXXXXXX  KKVV   +S+ALNNSV  DKS KE+SDEA         K        EG GH KRMIADGS AALSTKAA ALINDG KGL  HPTPQAPRED XXXXXXXXXXXXXXXXXXXXXXXXX   SVKSKKRLEEERAVAFRTVHRTLLSPVTHLSPANGGRPH PAVFTKFAKPAVEKAKAIDRNNWNTLAQELARGSDDAAAAAHDSNQTGRLTVAATEERL RGLQPA+LA EQ            QQDSLVAGREVHDGDAKAIKTSPDAMITLR+STASPSNDQLPRPPVPSPSHQ+E+QRPP+ +RRQS SNDGQ PLLQTS ELPQEGFYQIGGGSGF LGQHIAGRNPASPIAAS
Sbjct:  708 DEEQFFLGLGAKRLGKSTKR-------------------------------------------------------------------------------------SATGDRAAKSPGAGGGRSGVTNYPDETHPNGHTSNPNGMMRMNTPEASASSGDGGWGGGLGLADRSQSSIAATGGVGATSTAVVGSXXXXXXRRMKGXXSVLLGAPRQQVSQGGLEXXXXXXXXXXXXXXARSGVRSAAEMAVSAVLGWEKGLNAAXXXXXXXXXXXXX--KKVVPLPTSKALNNSVGTDKSGKERSDEAKRRAKKQQAK--------EGPGHPKRMIADGSAAALSTKAAEALINDGMKGLAVHPTPQAPREDXXXXXXXXXXXXXXXXXXXXXXXXXXRKTSVKSKKRLEEERAVAFRTVHRTLLSPVTHLSPANGGRPHDPAVFTKFAKPAVEKAKAIDRNNWNTLAQELARGSDDAAAAAHDSNQTGRLTVAATEERLRRGLQPAHLAGEQXXXXXXXXXXXXQQDSLVAGREVHDGDAKAIKTSPDAMITLRVSTASPSNDQLPRPPVPSPSHQQEYQRPPL-QRRQSGSNDGQPPLLQTSIELPQEGFYQIGGGSGFSLGQHIAGRNPASPIAAS 1247          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12414.2005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXS5_9PHAE3.020e-20578.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDK1_ECTSI2.460e-18866.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 738..798
NoneNo IPR availablePANTHERPTHR21704:SF19coord: 504..807
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 504..807

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12414contigEcto-sp13_S_contig12414:2..4791 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12414.2005.1mRNA_Ecto-sp13_S_contig12414.2005.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12414 2..4791 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12414.2005.1 ID=prot_Ecto-sp13_S_contig12414.2005.1|Name=mRNA_Ecto-sp13_S_contig12414.2005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=833bp
DEEQFFLGLGAKRLGKSTKRRLVECQTQITTALRGGRPVVPASWTPATAP
TAGAAPAAATAAAAVPVSSTPTKRPNKKQSQAPSASGGVSPSSRPTAAPA
SAGRSSATGDRAAKSPGASGRSVLTNYPDDTHANGRTSNPNGMMRMNTPE
ASASSGDGGWGGGLGLPDKSQSSMSATVGVGAASTAGVGSGGGSGARRMK
GGGSGLLGTPRQQVSQGGLESAVAAAASGGAARSGVRSAAEMVVSAVLGW
EKGLNASAAAAAAAAVAASSASKKVVSPRSSQALNNSVAMDKSAKEKSDE
AKSKKQQTKGKLEGTDVSFEGSGHSKRMIADGSTAALSTKAAGALINDGT
KGLVAHPTPQAPREDDERQKPTKKKLAAVAAQPPPPMTTVKRKTSVKSKK
RLEEERAVAFRTVHRTLLSPVTHLSPANGGRPHAPAVFTKFAKPAVEKAK
AIDRNNWNTLAQELARGSDDAAAAAHDSNQTGRLTVAATEERLGRGLQPA
YLAREQQQQRQQHGKQQHQQDSLVAGREVHDGDAKAIKTSPDAMITLRIS
TASPSNDQLPRPPVPSPSHQEEHQRPPVHRRRQSDSNDGQSPLLQTSTEL
PQEGFYQIGGGSGFYLGQHIAGRNPASPIAASSRPAEAARATAMLEAGAA
EATRTSPSPLAPVPEQRGVADAMVLDHGGQVTSCLPPSPPSFPLSRSTSG
SRGSMLSPTLSPRSAGAESSRSMMVASGSGPFPGRRRSQIQQQQQQQQQQ
QQQQLQQQQQQQQQQQQQQQQQQQQSQQQQQQQQQQQQQQQQQQTQQQQT
QQQTQKMQEDFSAASLGMPFSSPAYSPPWDSSF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033031SCC2/Nipped-B