prot_Ecto-sp13_S_contig86.20020.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig86.20020.1
Unique Nameprot_Ecto-sp13_S_contig86.20020.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length200
Homology
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: A0A6H5JU39_9PHAE (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU39_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 7.850e-131
Identity = 191/196 (97.45%), Postives = 194/196 (98.98%), Query Frame = 0
Query:    1 MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKVS 196
            MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVL+FDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEK+MDKVRDSALRPLEGE WWK ADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKV+
Sbjct:  699 MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLMFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKNMDKVRDSALRPLEGECWWKGADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKVA 894          
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: A0A7S2HVI8_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVI8_9STRA)

HSP 1 Score: 280 bits (717), Expect = 4.280e-88
Identity = 129/195 (66.15%), Postives = 151/195 (77.44%), Query Frame = 0
Query:    1 MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKV 195
            +HS RCD  +K++IAQE RD+VIYFPYN+DFRGR YPIPPNLN LGSD  RG+L F++ KPLGEKGL+WLKVHLANLYG DK +F+DR+ F   HM +V DSA RPLEG  WW  A+SPWQ LAVC +LT AL  P+P  + S +PVH DGSCNGLQHYAALG D  GGA VNL+P  EPQDVY  VC +V  K+
Sbjct:  170 LHSQRCDTILKLNIAQENRDYVIYFPYNLDFRGRAYPIPPNLNHLGSDLCRGLLKFEKKKPLGEKGLWWLKVHLANLYGFDKANFNDRMQFTMDHMSEVYDSAARPLEGNRWWTKAESPWQVLAVCKELTEALSHPNPEAFESGMPVHMDGSCNGLQHYAALGRDVEGGASVNLTPHHEPQDVYMEVCAIVNHKI 364          
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: A0A7S2HVK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVK7_9STRA)

HSP 1 Score: 280 bits (717), Expect = 6.340e-86
Identity = 129/195 (66.15%), Postives = 151/195 (77.44%), Query Frame = 0
Query:    1 MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKV 195
            +HS RCD  +K++IAQE RD+VIYFPYN+DFRGR YPIPPNLN LGSD  RG+L F++ KPLGEKGL+WLKVHLANLYG DK +F+DR+ F   HM +V DSA RPLEG  WW  A+SPWQ LAVC +LT AL  P+P  + S +PVH DGSCNGLQHYAALG D  GGA VNL+P  EPQDVY  VC +V  K+
Sbjct:  428 LHSQRCDTILKLNIAQENRDYVIYFPYNLDFRGRAYPIPPNLNHLGSDLCRGLLKFEKKKPLGEKGLWWLKVHLANLYGFDKANFNDRMQFTMDHMSEVYDSAARPLEGNRWWTKAESPWQVLAVCKELTEALSHPNPEAFESGMPVHMDGSCNGLQHYAALGRDVEGGASVNLTPHHEPQDVYMEVCAIVNHKI 622          
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: Q0QFS3_9MYCE (DNA-directed RNA polymerase (Fragment) n=1 Tax=Liceales sp. orange ball TaxID=373140 RepID=Q0QFS3_9MYCE)

HSP 1 Score: 264 bits (675), Expect = 1.190e-84
Identity = 120/195 (61.54%), Postives = 146/195 (74.87%), Query Frame = 0
Query:    1 MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKV 195
            +HSL CD   K+D+A +  DH  Y P+N+DFRGR YP+PP+LN LGSD  RG+L+ D AKPLG +GL+WLKVHLANLYG DKV F+ RVAFV+K++D V D+   PL G  WW  AD PWQCLA C +LTAA+ S DP  + SR+PVHQDGSCNGLQHYAALG D  G  +VNL PS  PQDVY+GV  +V K++
Sbjct:   13 LHSLWCDATYKLDVAAKMMDHTFYLPHNVDFRGRAYPLPPHLNQLGSDLCRGLLLLDTAKPLGPRGLWWLKVHLANLYGVDKVPFEARVAFVDKNIDNVMDAGDNPLGGRMWWLKADDPWQCLATCTELTAAIRSGDPENFKSRIPVHQDGSCNGLQHYAALGGDEIGARKVNLIPSDSPQDVYAGVATLVAKRI 207          
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: D8LUV8_BLAHO (DNA-directed RNA polymerase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LUV8_BLAHO)

HSP 1 Score: 269 bits (687), Expect = 4.270e-84
Identity = 118/195 (60.51%), Postives = 148/195 (75.90%), Query Frame = 0
Query:    1 MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKV 195
            +HSLRCD+  K+DIA+EF++  IYFP N+DFRGR YPIPP+LN LG+D  RG+L F   KPLGE+GL+WLK+ +ANLYG DK+SFDDR  +V++H+  +R+S   PL    WWK+ D PWQ LA C +   A+DSP P  YLS +PVHQDGSCNGLQHYAALGLD  GG QVNL PS +P DVYS V  +VK+++
Sbjct:  141 LHSLRCDLGYKLDIAREFQNDTIYFPMNLDFRGRVYPIPPHLNHLGNDLCRGLLSFARKKPLGERGLFWLKIQVANLYGNDKISFDDRSKWVDEHLPAIRESVRNPLAPNAWWKEGDDPWQLLATCMEYIRAIDSPHPEAYLSNIPVHQDGSCNGLQHYAALGLDKTGGTQVNLVPSSKPGDVYSAVLRIVKERI 335          
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: A0A4D9D3J6_9STRA (DNA-directed RNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J6_9STRA)

HSP 1 Score: 278 bits (712), Expect = 4.370e-84
Identity = 128/197 (64.97%), Postives = 153/197 (77.66%), Query Frame = 0
Query:    1 MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKVSS 197
            + SLRCD +IK+ IA+EFR+H  YFPYN+DFRGR YP+PPNLN LGSD  RG+L F E +PLG+ GL WLK+HLANL G+DK+SFDDRVAFVE  M+ V+DSA RPL G GWW+ A+ PWQ LAVC ++ AA++S DP  +LS +PVH DGSCNGLQHYAALG D  G  QVNL  S  P+DVY+GVCD V K V S
Sbjct:  641 LFSLRCDTEIKLSIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEGKMENVQDSAARPLNGHGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHS 837          
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: Q0QFR1_ACACA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba castellanii TaxID=5755 RepID=Q0QFR1_ACACA)

HSP 1 Score: 262 bits (669), Expect = 2.670e-82
Identity = 118/195 (60.51%), Postives = 146/195 (74.87%), Query Frame = 0
Query:    1 MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKV 195
            +HSLRCD+  K+ +A+E +D   Y+P+NMDFRGRTYPIPP+LN LG D  RG+L F E KPLGE GL WLKVHLAN++G DK++F+DRV FVE +M+ + DSA  PL G+ WW  AD PWQCLA   +L  A +S  P  Y+S LP+HQDGSCNGLQHYAALG D  G  QVNL PS  PQDVYSGV ++V +++
Sbjct:   66 LHSLRCDVTYKLQVAKECQDRTFYYPHNMDFRGRTYPIPPHLNHLGQDLCRGLLTFAEGKPLGESGLRWLKVHLANVFGNDKITFEDRVRFVENNMEHIMDSASNPLGGQRWWLKADKPWQCLAASIELINAYNSGQPETYVSTLPIHQDGSCNGLQHYAALGGDEMGARQVNLLPSERPQDVYSGVVELVVRRL 260          
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: A0A0C9TFI6_PAXIN (DNA-directed RNA polymerase (Fragment) n=1 Tax=Paxillus involutus ATCC 200175 TaxID=664439 RepID=A0A0C9TFI6_PAXIN)

HSP 1 Score: 259 bits (663), Expect = 2.220e-81
Identity = 120/198 (60.61%), Postives = 147/198 (74.24%), Query Frame = 0
Query:    2 HSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKVSSHV 199
            HS RC +  K++I++ F     Y P+N+DFRGR YPIPP+LN +G D SRG+L+F EAKPLGE+GL WLK+HLANLYG DK SFD+RV FV K +D + DSA +PLEG  WW  AD PWQCLA C DL AAL+S DP  +LS LPVHQDG+CNGLQHYAALG D  G AQVNL+ +  P DVY+ V ++V++ V   V
Sbjct:  182 HSERCSVNYKIEISRAFLGDAFYLPHNLDFRGRAYPIPPHLNHIGDDLSRGLLMFAEAKPLGERGLRWLKIHLANLYGFDKGSFDERVEFVMKRLDDIYDSAEKPLEGRRWWTTADDPWQCLATCMDLRAALESGDPHAHLSNLPVHQDGTCNGLQHYAALGGDGQGAAQVNLAVTDRPSDVYTFVANMVEEIVKRDV 379          
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: UPI000644856E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644856E)

HSP 1 Score: 267 bits (683), Expect = 6.520e-81
Identity = 122/195 (62.56%), Postives = 151/195 (77.44%), Query Frame = 0
Query:    1 MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKV 195
            +HSLRCD   K+++A++  D+  YFP+N+DFRGR+YPIPP+LN +GSD  R +L F EAKPLG +GL WL+V +AN+YG DKVSF+DR+AF E+HMD + DSA  PL+G  WW  ADSPWQ LA C +LT AL SP P  +LS LP+HQDG+CNGLQHYAALG D  GG +VNL PSP+PQDVYSGV  +V K V
Sbjct:  469 LHSLRCDTVYKLNVAKQLHDYKFYFPHNIDFRGRSYPIPPHLNHMGSDLCRSMLRFAEAKPLGARGLQWLRVQVANVYGVDKVSFEDRIAFTEEHMDDIFDSADNPLKGRKWWLKADSPWQTLAACIELTDALRSPKPEEFLSSLPIHQDGTCNGLQHYAALGGDEMGGLKVNLLPSPKPQDVYSGVAVMVSKLV 663          
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Match: A0A3M6VUS0_9STRA (DNA-directed RNA polymerase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUS0_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.600e-80
Identity = 122/198 (61.62%), Postives = 146/198 (73.74%), Query Frame = 0
Query:    2 HSLRCDMKIKVDIAQEFRDHV-IYFPYNMDFRGRTYPIPPNLNILGSDFSRGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVRDSALRPLEGEG---WWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQDGSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKV 195
            HSLRCD   K+  A+EF+D   +Y+PYNMDFRGR YPIPPNLN LGSD SR +L+F + KPLGE GL WLK+HLAN++G +K SFD+RV F + HMD+   SA  PL GEG   WWK AD P+  L VC +L  A++SPDP +Y+S +P+HQDGSCNGLQHYAALG D  GGAQVNL P+P P DVY GV   V  KV
Sbjct:   13 HSLRCDTLYKLQAAEEFKDEPELYYPYNMDFRGRVYPIPPNLNHLGSDLSRSLLIFRDRKPLGENGLRWLKIHLANVFGVNKCSFDERVEFADAHMDRAVASAREPL-GEGDCAWWKGADYPFLALGVCFELKRAIESPDPTKYMSNIPIHQDGSCNGLQHYAALGRDERGGAQVNLVPAPRPSDVYMGVATQVLTKV 209          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86.20020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU39_9PHAE7.850e-13197.45DNA-directed RNA polymerase n=2 Tax=Ectocarpus Tax... [more]
A0A7S2HVI8_9STRA4.280e-8866.15DNA-directed RNA polymerase n=1 Tax=Dictyocha spec... [more]
A0A7S2HVK7_9STRA6.340e-8666.15DNA-directed RNA polymerase n=1 Tax=Dictyocha spec... [more]
Q0QFS3_9MYCE1.190e-8461.54DNA-directed RNA polymerase (Fragment) n=1 Tax=Lic... [more]
D8LUV8_BLAHO4.270e-8460.51DNA-directed RNA polymerase n=1 Tax=Blastocystis h... [more]
A0A4D9D3J6_9STRA4.370e-8464.97DNA-directed RNA polymerase n=2 Tax=Monodopsidacea... [more]
Q0QFR1_ACACA2.670e-8260.51DNA-directed RNA polymerase (Fragment) n=1 Tax=Aca... [more]
A0A0C9TFI6_PAXIN2.220e-8160.61DNA-directed RNA polymerase (Fragment) n=1 Tax=Pax... [more]
UPI000644856E6.520e-8162.56hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A3M6VUS0_9STRA1.600e-8061.62DNA-directed RNA polymerase n=1 Tax=Peronospora ef... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.280coord: 60..135
e-value: 1.2E-33
score: 116.6
NoneNo IPR availableGENE3D1.10.150.20coord: 167..199
e-value: 3.1E-5
score: 25.6
NoneNo IPR availablePANTHERPTHR10102:SF0DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 1..196
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..196
IPR002092DNA-directed RNA polymerase, phage-typePFAMPF00940RNA_polcoord: 60..197
e-value: 1.4E-66
score: 225.1
IPR002092DNA-directed RNA polymerase, phage-typePANTHERPTHR10102DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIALcoord: 1..196
IPR002092DNA-directed RNA polymerase, phage-typePROSITEPS00900RNA_POL_PHAGE_1coord: 146..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig86contigEcto-sp13_S_contig86:38967..41164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig86.20020.1mRNA_Ecto-sp13_S_contig86.20020.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig86 38967..41188 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig86.20020.1 ID=prot_Ecto-sp13_S_contig86.20020.1|Name=mRNA_Ecto-sp13_S_contig86.20020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
MHSLRCDMKIKVDIAQEFRDHVIYFPYNMDFRGRTYPIPPNLNILGSDFS
RGVLVFDEAKPLGEKGLYWLKVHLANLYGEDKVSFDDRVAFVEKHMDKVR
DSALRPLEGEGWWKDADSPWQCLAVCADLTAALDSPDPARYLSRLPVHQD
GSCNGLQHYAALGLDANGGAQVNLSPSPEPQDVYSGVCDVVKKKVSSHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002092DNA-dir_Rpol_phage-type