prot_Ecto-sp13_S_contig86.20017.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig86.20017.1
Unique Nameprot_Ecto-sp13_S_contig86.20017.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length997
Homology
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BLAST of mRNA_Ecto-sp13_S_contig86.20017.1 vs. uniprot
Match: D7FQU2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQU2_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 3.860e-134
Identity = 260/457 (56.89%), Postives = 264/457 (57.77%), Query Frame = 0 
Query:  111 MSFTASDSSSVQTYNFTGIDKTHGSINSKSSLSRRKRKHDWRPANRLPTSHGVSPPLPGRLRVASPWSERDMSSDCVMNRWTASFDADRARFQSISVMCEQRLRKACVMTEHARMPDEFRTMAACEALGTLLPVFERYGSLVTLVMKELLRSIYEDPDLVIDQFLAWLHPDPSLQCARAPAEVMLLKSKPHFVRCRELQSQIASLEESLVLKEKHEGTLLNNLTSARNSMRSLLGKDSLLITRFIFRSWKAVMEDGSALRRRFQRTRLRVWFSGLRTRLTRRMNQEAKYQLGLRERELMLHASEKEKTTRDAAQPTSEPAEETQQNTSPASTCELIVASLLEQVKTLMTEVQDHRNGSRENRVLMASVTKMALAAKVAENRIRLDIGDDLSIEDEDVGVGHSTAGTQTDPVSFDNRSGGRAPGGDSHTASSGSKEEALTPNTSNNKLANEDNGGRRK 567
            MSFTASDSSSVQTYNFTGID THGSINSKSSL RRKRKHDWRPANRLPTSHGVSP  PGRL+ ASPWSERDMSSDCVMNRWTASFDADRARFQSISVMCEQRLRK                                                                                                IASL+ESLVLKEKHEGTLLNNLTSARNSMRSLLGKDSLLITRFIFRSWKAVMED SALRRRFQR                                                                                     VQDHRNGSRENRVLMASVTKMALAAKVAENRIRLDIGDDLSIEDED+GVGHST GTQTDPVSFDN SGGR PGGDSHTASSGSKEEALTP TSNNKL NED+GG RK
Sbjct:    1 MSFTASDSSSVQTYNFTGIDNTHGSINSKSSL-RRKRKHDWRPANRLPTSHGVSPSFPGRLKAASPWSERDMSSDCVMNRWTASFDADRARFQSISVMCEQRLRK------------------------------------------------------------------------------------------------IASLQESLVLKEKHEGTLLNNLTSARNSMRSLLGKDSLLITRFIFRSWKAVMEDTSALRRRFQR-------------------------------------------------------------------------------------VQDHRNGSRENRVLMASVTKMALAAKVAENRIRLDIGDDLSIEDEDMGVGHSTTGTQTDPVSFDNPSGGRVPGGDSHTASSGSKEEALTPKTSNNKLPNEDHGGLRK 275
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BLAST of mRNA_Ecto-sp13_S_contig86.20017.1 vs. uniprot
Match: A0A6H5JYB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB4_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 6.700e-21
Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0 
Query:  854 MLWQLSGYAMSTPTMHRLFKLTTVSDKENKKHFSFVQTSALAEHILRSVFHFKTDE 909
            MLWQLSGYAMSTPTMHRLFKLTTVSDKE+KK   FVQTSALAE ILRSV HF TDE
Sbjct:    1 MLWQLSGYAMSTPTMHRLFKLTTVSDKEDKKKILFVQTSALAEQILRSVSHFTTDE 56
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86.20017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQU2_ECTSI3.860e-13456.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYB4_9PHAE6.700e-2187.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 305..325
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 966..995
score: 7.913

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig86contigEcto-sp13_S_contig86:11550..21134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig86.20017.1mRNA_Ecto-sp13_S_contig86.20017.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig86 11490..21135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig86.20017.1 ID=prot_Ecto-sp13_S_contig86.20017.1|Name=mRNA_Ecto-sp13_S_contig86.20017.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=997bp
MNVPCGKFPLQLPRDVLGARNTVPDEVSQSRPGSVGGQLEIGRVLTSVDA
HVSPSYVRHGSKVLHELDDPLHVNGLAVKRNLVDASGSQVTDIAQSSLAH
DVSYPGQRHAMSFTASDSSSVQTYNFTGIDKTHGSINSKSSLSRRKRKHD
WRPANRLPTSHGVSPPLPGRLRVASPWSERDMSSDCVMNRWTASFDADRA
RFQSISVMCEQRLRKACVMTEHARMPDEFRTMAACEALGTLLPVFERYGS
LVTLVMKELLRSIYEDPDLVIDQFLAWLHPDPSLQCARAPAEVMLLKSKP
HFVRCRELQSQIASLEESLVLKEKHEGTLLNNLTSARNSMRSLLGKDSLL
ITRFIFRSWKAVMEDGSALRRRFQRTRLRVWFSGLRTRLTRRMNQEAKYQ
LGLRERELMLHASEKEKTTRDAAQPTSEPAEETQQNTSPASTCELIVASL
LEQVKTLMTEVQDHRNGSRENRVLMASVTKMALAAKVAENRIRLDIGDDL
SIEDEDVGVGHSTAGTQTDPVSFDNRSGGRAPGGDSHTASSGSKEEALTP
NTSNNKLANEDNGGRRKAEGASDVWTRSPINGVEGLHHLSKLSRYALQAI
VIPDFYTRKVVSDASDDLRRERRPEPREAIEAFMFESCGGDPFKSEIKLA
TLKAAVRKYGTSGNRRISLFGTLVGWLHEQSYIPQARKALDLYLMVMIRI
FNDRAHQLNARMVRGDGLAYAPLEAVAPVVEELLPIMEEGEHFQDRSHSL
SCSIERPNGMWALSETRKVELTRSIAALARPAGETYLGAHSYDEAYKTDS
ILQVLDIDIAMETIMNAWFEQRHENRRLLTKTIEAHRVIENGGQRLSFER
FSDMLWQLSGYAMSTPTMHRLFKLTTVSDKENKKHFSFVQTSALAEHILR
SVFHFKTDEHRAVEILEEGDERHLKEQARDNWQAICTKTTRKSRGERLRL
YITLQGRMRGWKTRYRHQMSTRIQQVGRGYIVRRRGGSIQRERHHQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS