prot_Ecto-sp13_S_contig8592.20006.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8592.20006.1
Unique Nameprot_Ecto-sp13_S_contig8592.20006.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length284
Homology
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: D7G9A0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A0_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 1.600e-138
Identity = 264/283 (93.29%), Postives = 271/283 (95.76%), Query Frame = 0
Query:    1 MAGVLAAGERAISGTEASGATGGAMGPNRNHSGAGGGEGYREITDRGPPSTICHGDALDSDGDKTAYDDQGRVRLPSSSQPASFDAAARGHMIPPGGAIGSSSHLRAPPRHSKSNEGFRGGSSAVAGLGGRRAPGGEAEEERECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSNEDYGRAFRRALRAGLGGESSPSSPRGAVGNAELL 283
            MAGVLAAGERA+SGT+AS ATGGA+GPNRNHSGAGGGEGYREITDRGPPS ICHGDALDSD DKTA+DDQG+ RLPSSSQPASFDAAARGHM+P GGAIGSSSHLRA PR    NEGFRGGSSAVAGLGGRRAPGGEAEEERECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSNEDYGRAFRRALRAGLGGESSPS+PRGA GN ELL
Sbjct:    1 MAGVLAAGERAMSGTDAS-ATGGAIGPNRNHSGAGGGEGYREITDRGPPSAICHGDALDSDSDKTAHDDQGQFRLPSSSQPASFDAAARGHMMPAGGAIGSSSHLRASPRRGTINEGFRGGSSAVAGLGGRRAPGGEAEEERECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSNEDYGRAFRRALRAGLGGESSPSTPRGAGGNVELL 282          
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: A0A6H5KFU5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU5_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 1.960e-126
Identity = 249/283 (87.99%), Postives = 257/283 (90.81%), Query Frame = 0
Query:    1 MAGVLAAGERAISGTEASGATGGAMGPNRNHSGAGGGEGYREITDRGPPSTICHGDALDSDGDKTAYDDQGRVRLPSSSQPASFDAAARGHMIPPGGAIGSSSHLRAPPRHSKSNEGFRGGSSAVAGLGGRRAPGGEAEEERECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSNEDYGRAFRRALRAGLGGESSPSSPRGAVGNAELL 283
            MA VLAAGERA+SGT+ASGATGGA+GPNRNHSG GGGEGYREITDRGP    CHGDALDSD DK A+DDQG+ RLPSSSQPAS DA ARG M+P GGAIGS SHLRA PR    NEGFRGGSSAVAGLGGRRAPGGEAEEERECVICMEEF KEDPEMLTLCSCGVNKTFFHY+CLLQWLSKHSYCPACRGYLFFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   V+SNEDY RAFRRALRAGLGGESSPSSPRGA GN ELL
Sbjct:  215 MAEVLAAGERAMSGTDASGATGGAIGPNRNHSGGGGGEGYREITDRGPQFATCHGDALDSDSDKIAHDDQGQFRLPSSSQPASLDATARGRMMPAGGAIGSPSHLRASPRQGTCNEGFRGGSSAVAGLGGRRAPGGEAEEERECVICMEEFCKEDPEMLTLCSCGVNKTFFHYACLLQWLSKHSYCPACRGYLFFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEVLSNEDYRRAFRRALRAGLGGESSPSSPRGAGGNVELL 497          
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: A0A835Z175_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z175_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.250e-20
Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 0
Query:  146 ICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 196
            +C+ EF+KEDPE+LTLCSCG+NKT FHY+CLL WL  HSYCPACRG L+FE
Sbjct:    1 MCLGEFTKEDPEVLTLCSCGMNKTAFHYACLLGWLEHHSYCPACRGELYFE 51          
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: A0A6U0WDD7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WDD7_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 9.030e-17
Identity = 32/55 (58.18%), Postives = 45/55 (81.82%), Query Frame = 0
Query:  142 RECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 196
            +ECVICM+EF++++PE+  LC CGVNKT FHY CLL+W+   ++CP CRG +FF+
Sbjct:  120 KECVICMDEFTEKNPEVPVLCDCGVNKTHFHYHCLLEWMQHRNFCPVCRGSIFFQ 174          
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: A0A484DQF9_BRELC (RING-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQF9_BRELC)

HSP 1 Score: 82.0 bits (201), Expect = 3.530e-15
Identity = 32/60 (53.33%), Postives = 49/60 (81.67%), Query Frame = 0
Query:  137 EAEEERECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 196
            E + E EC++C++ F++E+P++ TLC CG+N+T FH SCLL+WL++++ CP CR YLFFE
Sbjct:  134 EGQLELECIMCLDTFNEENPKVRTLCHCGMNRTNFHMSCLLEWLNRNANCPVCREYLFFE 193          
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: A0A2P4YDS4_9STRA (RING-type domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDS4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.000e-15
Identity = 31/54 (57.41%), Postives = 46/54 (85.19%), Query Frame = 0
Query:  143 ECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 196
            EC++C++ FS+++P++ TLC+CG+N+T FH SCLL+WL++ S CP CR YLFFE
Sbjct:  146 ECIMCLDTFSEDNPKVRTLCNCGMNRTNFHMSCLLEWLNRDSNCPVCREYLFFE 199          
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: A0A7S2CKZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKZ4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.220e-15
Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  140 EERECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 196
            E+ ECVICME F   +P M TLC CGVNKT FHY+CLL W  K  +CPAC G L++E
Sbjct:   71 EDVECVICMETFDASNPMMPTLCKCGVNKTCFHYACLLTWKEKQDHCPACYGPLYYE 127          
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: A0A329SNC7_9STRA (RING-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SNC7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.250e-15
Identity = 31/54 (57.41%), Postives = 46/54 (85.19%), Query Frame = 0
Query:  143 ECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 196
            EC++C++ FS+++P++ TLC+CG+N+T FH SCLL+WL++ S CP CR YLFFE
Sbjct:  149 ECIMCLDTFSEDNPKVRTLCNCGMNRTNFHMSCLLEWLNRDSNCPVCREYLFFE 202          
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: G4YPL0_PHYSP (RING-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YPL0_PHYSP)

HSP 1 Score: 82.0 bits (201), Expect = 4.510e-15
Identity = 31/54 (57.41%), Postives = 46/54 (85.19%), Query Frame = 0
Query:  143 ECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 196
            EC++C++ FS+++P++ TLC+CG+N+T FH SCLL+WL++ S CP CR YLFFE
Sbjct:  152 ECIMCLDTFSEDNPKVRTLCNCGMNRTNFHMSCLLEWLNRDSNCPVCREYLFFE 205          
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Match: D0MXP6_PHYIT (RING-type domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MXP6_PHYIT)

HSP 1 Score: 80.9 bits (198), Expect = 1.070e-14
Identity = 30/54 (55.56%), Postives = 46/54 (85.19%), Query Frame = 0
Query:  143 ECVICMEEFSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFE 196
            EC++C++ FS+++P++ TLC+CG+N+T FH SCLL+WL++ + CP CR YLFFE
Sbjct:  146 ECIMCLDTFSEDNPKVRTLCNCGMNRTNFHMSCLLEWLNRDANCPVCREYLFFE 199          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8592.20006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9A0_ECTSI1.600e-13893.29RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KFU5_9PHAE1.960e-12687.99RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z175_9STRA3.250e-2074.51RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6U0WDD7_9STRA9.030e-1758.18Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A484DQF9_BRELC3.530e-1553.33RING-type domain-containing protein n=1 Tax=Bremia... [more]
A0A2P4YDS4_9STRA4.000e-1557.41RING-type domain-containing protein n=1 Tax=Phytop... [more]
A0A7S2CKZ4_9STRA4.220e-1561.40Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A329SNC7_9STRA4.250e-1557.41RING-type domain-containing protein n=2 Tax=Phytop... [more]
G4YPL0_PHYSP4.510e-1557.41RING-type domain-containing protein n=3 Tax=Phytop... [more]
D0MXP6_PHYIT1.070e-1455.56RING-type domain-containing protein n=2 Tax=Phytop... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 131..193
e-value: 4.4E-13
score: 50.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 143..190
e-value: 1.7E-10
score: 41.0
NoneNo IPR availablePANTHERPTHR45798:SF44RING-H2 FINGER PROTEIN ATL61-RELATEDcoord: 137..205
NoneNo IPR availablePANTHERPTHR45798FAMILY NOT NAMEDcoord: 137..205
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 138..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8592contigEcto-sp13_S_contig8592:50..2682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8592.20006.1mRNA_Ecto-sp13_S_contig8592.20006.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8592 11..5341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8592.20006.1 ID=prot_Ecto-sp13_S_contig8592.20006.1|Name=mRNA_Ecto-sp13_S_contig8592.20006.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=284bp
MAGVLAAGERAISGTEASGATGGAMGPNRNHSGAGGGEGYREITDRGPPS
TICHGDALDSDGDKTAYDDQGRVRLPSSSQPASFDAAARGHMIPPGGAIG
SSSHLRAPPRHSKSNEGFRGGSSAVAGLGGRRAPGGEAEEERECVICMEE
FSKEDPEMLTLCSCGVNKTFFHYSCLLQWLSKHSYCPACRGYLFFEERRR
GGGDDRAQDRSSIAATTGTTTTVGGDSSRTSGRLEPPAPPSSSGGVVSNE
DYGRAFRRALRAGLGGESSPSSPRGAVGNAELL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING