prot_Ecto-sp13_S_contig858.19990.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig858.19990.1
Unique Nameprot_Ecto-sp13_S_contig858.19990.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
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BLAST of mRNA_Ecto-sp13_S_contig858.19990.1 vs. uniprot
Match: A0A6H5JTG7_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG7_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.860e-9
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:   58 KTFKPDTHAVDVTVALGQHGLGLVLGK 84
            +TFKPDTHAVDVTVALGQHGLGLVLGK
Sbjct:    5 QTFKPDTHAVDVTVALGQHGLGLVLGK 31
[Close]
BLAST of mRNA_Ecto-sp13_S_contig858.19990.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 3.080e-8
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 0 
Query:   53 QPALWKTFKPDTHAVDVTVALGQHGLGLVLGK 84
            +P+  +TFKPDTHAVDVTV+LGQHGLGLVLGK
Sbjct:  483 KPSEGQTFKPDTHAVDVTVSLGQHGLGLVLGK 514
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig858.19990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTG7_9PHAE3.860e-996.30PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FUF8_ECTSI3.080e-881.25Similar to Uncharacterized protein conserved in ba... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig858contigEcto-sp13_S_contig858:17327..19134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig858.19990.1mRNA_Ecto-sp13_S_contig858.19990.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig858 17327..20162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig858.19990.1 ID=prot_Ecto-sp13_S_contig858.19990.1|Name=mRNA_Ecto-sp13_S_contig858.19990.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
MKADSNPHENGAMDMHRRESCATATTHGKDHAIHGGFGVRVSINDATPIA
IGQPALWKTFKPDTHAVDVTVALGQHGLGLVLGK
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