prot_Ecto-sp13_S_contig8559.19964.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8559.19964.1
Unique Nameprot_Ecto-sp13_S_contig8559.19964.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length451
Homology
BLAST of mRNA_Ecto-sp13_S_contig8559.19964.1 vs. uniprot
Match: D7FJZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ1_ECTSI)

HSP 1 Score: 677 bits (1748), Expect = 3.330e-239
Identity = 416/460 (90.43%), Postives = 422/460 (91.74%), Query Frame = 0
Query:    1 MAAVQKTSQWDTQRHIAFSHVAHLGVDNVLFALRLRAGSLDPAPVNKSVLASSTGDDAEGVAEDPAARGRKNREXXXXXXXXXXXXXXXXXXNAN---EDNLNTAAGLEGSAMSLALGHGAPCKNKSCGRREALEDKLMAKWEQIKAELADKVKRAQKLRRSVEEKEKKRDAAVEEITALKEAEEGEAAGAEEQKKRIQAAESEGRRILEESQRLEVELRKLRVRYQEETQQKLPMPHGSIISEADAWAKAAEVAAXXXXXXXXXXXXXYVPDGRTVSFSTNGGRRRRTLHDEASAISGGGPISKRPSQEHSGRFGRWGTEAREQWSCCLCGDDXXXXXXXXXXG-----DGGRRGRIRGRAGVAGGCEAVPPSLGPGGMTAADDVRLVWGSGXXXXXXVCGSSGSADAGRIRREAWGTGQGGDDAKELWRPMLATSVSGGGG-AAWSLIRHHRRPQTAN 451
            M AVQKTSQWDT++HIAFSHVAHLGVDNVLFALRLRAGSLDP  VNKSVLASST DDAEG AEDPAARGR+N  XXXXXXXXXXXXXXXXXX      EDNLNTAAGLEGSA+S ALGHGAPCKNKSCGRREALEDKLMAKWEQIK ELADKVKRAQKLRRSVEE+EKKRDAAVEEITALKEAEEGEAAGAEEQKKRIQAAESEGRRILEESQRLEVELRKLRVRYQEETQQKLPMPHGSIISEADAWAKAAEVAAXXXXXXXXXXXXXYVPDG TVSFSTN GRRRRTLHDE SAISGGGP SKRPSQEH GRFGRWGTEAREQWSCCLCGDD   XXXXXXX      DGGRRGRIRGR GVAGGCEAVPP LGPGGMTAADDVRLVWGSG XXXXX CGSSGSA AGRIRREAWGT QGGDD +ELWRPMLATSVSGGGG AAWSLIR HRRPQTAN
Sbjct:    1 MTAVQKTSQWDTKKHIAFSHVAHLGVDNVLFALRLRAGSLDPVAVNKSVLASSTSDDAEGPAEDPAARGRRNXXXXXXXXXXXXXXXXXXXXXXXXXXEDNLNTAAGLEGSAISSALGHGAPCKNKSCGRREALEDKLMAKWEQIKTELADKVKRAQKLRRSVEEREKKRDAAVEEITALKEAEEGEAAGAEEQKKRIQAAESEGRRILEESQRLEVELRKLRVRYQEETQQKLPMPHGSIISEADAWAKAAEVAAXXXXXXXXXXXXXYVPDGLTVSFSTNEGRRRRTLHDEESAISGGGPTSKRPSQEHPGRFGRWGTEAREQWSCCLCGDDSGGXXXXXXXXXXEDVDGGRRGRIRGRVGVAGGCEAVPPRLGPGGMTAADDVRLVWGSGGXXXXXXCGSSGSAGAGRIRREAWGTAQGGDDGRELWRPMLATSVSGGGGGAAWSLIRQHRRPQTAN 460          
BLAST of mRNA_Ecto-sp13_S_contig8559.19964.1 vs. uniprot
Match: A0A6H5K8Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z7_9PHAE)

HSP 1 Score: 504 bits (1297), Expect = 4.730e-171
Identity = 326/463 (70.41%), Postives = 341/463 (73.65%), Query Frame = 0
Query:    1 MAAVQKTSQWDTQRHIAFSHVAHLGVDNVLFALRLRAGSLDPAPVNKSVLASSTGDDAEGVAEDPAARGRKNREXXXXXXXXXXXXXXXXXXNANEDNLNTAAGLEGSAMSLALGHGAPCKNKSCGRREALEDKLMAKWEQIKAELADKVKRAQKLRRSVEE-----------KEKKRDAAVEEITALKEAEEGEAAGAEEQKKRIQAAESEGRRILEESQRLEVELRKLRVRYQEETQQKLPMPHGSIISEADAWAKAAEVAAXXXXXXXXXXXXXYVPDGRTVSFSTNGGRRRRTLHDEASAISGGGPISKRPSQEHSGRFGRWGTEAREQWSCCLCGDDXXXXXXXXXXGDGGRRGRIRGRAGVAGGCEAVPPSLGPGGMTAADDVRLVWGSGXXXXXXVCGSSGSADAGRIRREAWGTGQGGDDAKELWRPMLATSVSGG-GGAAWSLIRHHRRPQTAN 451
            MAA+QKTSQWD +RH+AFSHVAHLGVDNVLFAL  R   ++    +K                    R R    XXXXXXXXXXXXXXXXXX  NEDNL+TAAGLEGSA+S ALGHGAPC+NKSCGRREALEDKLMAKWEQIK ELA KVK AQKLRRSV E           KEKKRDA VEEITALKEAEEGE+AG E                     RLEVELRKLRVRYQEETQQKLPMPHGSIISEADAWAKAAEVAA             YVPDG TVSFSTNGGRRRRTLHDE SAI+GGG  SKRPSQEH GRFGRWGTEARE+WSCCLCGD XXXXXXXXXX  G RRG +RGR GV GGCEAVPP LGPGGMTAADDVRLVWG G  XXXX          G  RREAWG  +GGDD +ELWRPMLATSVSGG GGAAWSLIR HRRPQTAN
Sbjct:    1 MAAIQKTSQWDKKRHVAFSHVAHLGVDNVLFALVRRWQFIENVACHKH------------------GRDRXXXXXXXXXXXXXXXXXXXXXXXXNEDNLHTAAGLEGSAISSALGHGAPCRNKSCGRREALEDKLMAKWEQIKTELAAKVKHAQKLRRSVSEWSRARARGGAEKEKKRDATVEEITALKEAEEGESAGVEXXXXXXXXXXXXXXXXXXXXXRLEVELRKLRVRYQEETQQKLPMPHGSIISEADAWAKAAEVAAAALSDEDEEPLPPYVPDGLTVSFSTNGGRRRRTLHDEESAITGGGQTSKRPSQEHPGRFGRWGTEARERWSCCLCGDXXXXXXXXXXXXXG-RRGIVRGRVGVVGGCEAVPPRLGPGGMTAADDVRLVWGRGGDXXXXXXXXXXXXXXGGTRREAWGAARGGDDGRELWRPMLATSVSGGSGGAAWSLIRQHRRPQTAN 444          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8559.19964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJZ1_ECTSI3.330e-23990.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8Z7_9PHAE4.730e-17170.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8559contigEcto-sp13_S_contig8559:1..3717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8559.19964.1mRNA_Ecto-sp13_S_contig8559.19964.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8559 1..3717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8559.19964.1 ID=prot_Ecto-sp13_S_contig8559.19964.1|Name=mRNA_Ecto-sp13_S_contig8559.19964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=451bp
MAAVQKTSQWDTQRHIAFSHVAHLGVDNVLFALRLRAGSLDPAPVNKSVL
ASSTGDDAEGVAEDPAARGRKNRERERAKRDARRKGAAAAVANANEDNLN
TAAGLEGSAMSLALGHGAPCKNKSCGRREALEDKLMAKWEQIKAELADKV
KRAQKLRRSVEEKEKKRDAAVEEITALKEAEEGEAAGAEEQKKRIQAAES
EGRRILEESQRLEVELRKLRVRYQEETQQKLPMPHGSIISEADAWAKAAE
VAAAALSDEDEEPPPPYVPDGRTVSFSTNGGRRRRTLHDEASAISGGGPI
SKRPSQEHSGRFGRWGTEAREQWSCCLCGDDSGGGGGGDEDGDGGRRGRI
RGRAGVAGGCEAVPPSLGPGGMTAADDVRLVWGSGGGGGGGVCGSSGSAD
AGRIRREAWGTGQGGDDAKELWRPMLATSVSGGGGAAWSLIRHHRRPQTA
N
back to top