prot_Ecto-sp13_S_contig85548.19958.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig85548.19958.1
Unique Nameprot_Ecto-sp13_S_contig85548.19958.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
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BLAST of mRNA_Ecto-sp13_S_contig85548.19958.1 vs. uniprot
Match: A0A1S1W673_9PEZI (Ankyrin unc44 n=3 Tax=Colletotrichum spaethianum species complex TaxID=2707349 RepID=A0A1S1W673_9PEZI)

HSP 1 Score: 49.7 bits (117), Expect = 1.530e-5
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0 
Query:    7 EVIKTLANAGANPDSRTPAGESPLFMAAKNGHVGTISELLRANA 50
            +V+ T+ NAGA+PD+RT  G +PLF A K GH+ T+  L+ A A
Sbjct:  609 DVLATMVNAGADPDTRTWPGFTPLFSAVKAGHLATVRLLITAGA 652
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig85548.19958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1S1W673_9PEZI1.530e-550.00Ankyrin unc44 n=3 Tax=Colletotrichum spaethianum s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13637Ank_4coord: 4..45
e-value: 2.2E-5
score: 24.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..52
e-value: 7.1E-12
score: 47.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..52
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 25..52
score: 9.938
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..52
score: 15.273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig85548contigEcto-sp13_S_contig85548:426..581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig85548.19958.1mRNA_Ecto-sp13_S_contig85548.19958.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig85548 426..581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig85548.19958.1 ID=prot_Ecto-sp13_S_contig85548.19958.1|Name=mRNA_Ecto-sp13_S_contig85548.19958.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
AVNDHSEVIKTLANAGANPDSRTPAGESPLFMAAKNGHVGTISELLRANA
NP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom