prot_Ecto-sp13_S_contig855.19953.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig855.19953.1
Unique Nameprot_Ecto-sp13_S_contig855.19953.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length351
Homology
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: D8LSM3_ECTSI (Co-chaperone grpE family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM3_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 1.950e-141
Identity = 287/346 (82.95%), Postives = 293/346 (84.68%), Query Frame = 0
Query:    5 RSATTSTLSRGAQRTRGTPLLSPGALRTSGYRKRGVRLMMAAEPAEDSVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEVXXXXXXXXXXXXXXXXXXXEVDPMAEVKQQIKDLETALMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFAKIGATDFFGVVGEKFVFTRHEKASEEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLGPEKKDEPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRDAGVDAAVPKGEQAEGEQAAA 350
            RSATTSTL RGAQRTRGTPLLSPGALRTSGYR+RGV LMMAAEP+EDSVAEAXXXXXXXXXXX                          ETEV           XXXXXXXX VDPMAEVKQQIKDLE  LMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNL TETEVKYNKSYQALYRQLKDVF KIGATDFFGVVGEKFV+TRHEKASEEHNPVMKEGLIIKCVSPGLELK+NVIRKAVCVVSLGPEK +EP XXXXXXXXXXXXXXXXXXXXXXX     MRDAGVDAA P+GEQ EGEQAAA
Sbjct:    2 RSATTSTLFRGAQRTRGTPLLSPGALRTSGYRERGVHLMMAAEPSEDSVAEAXXXXXXXXXXXSISEGEEAVEDEASGGGDV-------ETEVVAEEGEGKEGEXXXXXXXXXVDPMAEVKQQIKDLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLATETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEK-EEPXXXXXXXXXXXXXXXXXXXXXXXXPPP--MRDAGVDAAAPEGEQPEGEQAAA 337          
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: A0A6H5KMN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN5_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 5.770e-106
Identity = 194/215 (90.23%), Postives = 201/215 (93.49%), Query Frame = 0
Query:  136 MKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFAKIGATDFFGVVGEKFVFTRHEKASEEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLGPEKKDEPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRDAGVDAAVPKGEQAEGEQAAA 350
            MKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVF K+GATDFFGVVGEKFV+TRHEKASEE+NPVMKEGLIIKCVSPGLELK+NVIRKAVCVVSLGPEKK+   XXXXXXXXXXXXXXXXXXXX        MRDAGVDAA P+GE+ EGEQAAA
Sbjct:    1 MKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFTKVGATDFFGVVGEKFVYTRHEKASEEYNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKKEXXXXXXXXXXXXXXXXXXXXXXXEAEEPP--MRDAGVDAASPEGEEPEGEQAAA 213          
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: A0A835ZD01_9STRA (GrpE-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD01_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.820e-26
Identity = 65/132 (49.24%), Postives = 82/132 (62.12%), Query Frame = 0
Query:  166 NFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAA---EEALNLETETEVKYNKSYQALYRQLKDVFAKIGATDFFGVVGEKFVFTRHEKASEEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLGPEK 294
            N+RK         +A+A A VLR+  P  E FEA    E  L LETE E  +N +YQALYRQL DV+ K+G TDFFGV GE +   RHEK  E+H  + + G +++C++ G EL   VIRKA  V SLGPEK
Sbjct:   93 NYRKRRNLDQKKLQAEAMARVLRSFEPVLEAFEAVVDGETDLKLETEQEQMFNSNYQALYRQLADVYTKLGVTDFFGVQGETYDGIRHEKVGEQHADI-RAGAVLECLAKGNELSGGVIRKAKVVTSLGPEK 223          
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: A0A6H5KJC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC6_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.640e-22
Identity = 94/129 (72.87%), Postives = 95/129 (73.64%), Query Frame = 0
Query:    1 MHERRSATTSTLSRGAQRTRGTPLLSPGALRTSGYRKRGVRLMMAAEPAEDSVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEVXXXXXXXXXXXXXXXXXXXEVDPMAEVKQQIK 129
            MHERRSATTSTL RGAQRTRGTPLLSPGALRTSGYR+RGV LMMAAEP EDSVAEAXXXXXXXXXXXXXX                       ETEV        XXXXXXXXXXXEVDPMAEVKQQIK
Sbjct:   48 MHERRSATTSTLYRGAQRTRGTPLLSPGALRTSGYRERGVHLMMAAEPTEDSVAEAXXXXXXXXXXXXXXPSISEGEEAVEYDEASGGGYG--ETEVVAEEGDGTXXXXXXXXXXXEVDPMAEVKQQIK 174          
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: A0A7S3XS89_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS89_HETAK)

HSP 1 Score: 84.3 bits (207), Expect = 1.090e-14
Identity = 56/170 (32.94%), Postives = 89/170 (52.35%), Query Frame = 0
Query:  124 VKQQIKDLETALMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALN--LETETEVKYNKSYQALYRQLKDVFAKIGATDFFGVVGEKFVFTRHEKASEEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLG 291
            ++++  DLE  L   E + ++  D+V E G+ G++R AA VDN++++        +  + A  L   +P  + FE    A +     E E K   SY ALY QL   F K+G   +   VGE +   RHEK  E  +   K+G +++ ++PG+EL  ++IR A  VVS G
Sbjct:   97 LQKEFDDLEKQLSALEVKAKEAADNVLESGKTGYMRAAADVDNYKRALAKDLDQVKKTSMAGALTGFMPILDRFEEVYGAFDPAATPEGEAKLYGSYHALYGQLTLGFEKLGMAQYRAEVGEAYSVLRHEKTQEVESEA-KKGTVVEALAPGMELGGSIIRPARVVVSAG 265          
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: A0A7S4D635_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D635_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 3.080e-14
Identity = 56/170 (32.94%), Postives = 88/170 (51.76%), Query Frame = 0
Query:  124 VKQQIKDLETALMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALN--LETETEVKYNKSYQALYRQLKDVFAKIGATDFFGVVGEKFVFTRHEKASEEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLG 291
            ++++  DLE  L   E + ++  D+V E G+ G++R AA VDN++++        +  + A  L   +P  + FE    A +     E E K   SY ALY QL   F K+G   +   VGE +   RHEK  E  +   K+G +++ ++PG+EL   +IR A  VVS G
Sbjct:  195 LQKEFDDLEKQLSALEVKAKEAADNVLESGKTGYMRAAADVDNYKRALAKDLDQVKKTSMAGALTGFMPILDRFEEVYGAFDPAATPEGEAKLYGSYHALYGQLTLGFEKLGMAQYRAEVGEAYSVLRHEKTQEVESEA-KKGTVVEALAPGMELGGTIIRPARVVVSAG 363          
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: A0A7S2LF94_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LF94_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.590e-13
Identity = 58/181 (32.04%), Postives = 98/181 (54.14%), Query Frame = 0
Query:  119 DP-MAEVKQQIKDLETALMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFA-KIGATDFFGVVGEKFVFTRHEKASEEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLGPEKKDE 297
            DP M  +K++I  LE  L  +   L  V D  +   + G++R  A++DN+RK S   + +    ++AAV+R  LP  E  E       LE + E     +Y+AL   L++V   K+  +++   VG++F + R+   +EE +  + +G II+ +SPGLE+K NV+R A  + S G E  ++
Sbjct:  105 DPEMVALKEEISKLEATLRSKRAALSGVLDEAELYTETGYMRTLAEMDNYRKRSEISSQNNRYSSRAAVVRQFLPILEELEM------LERQYE---GSAYKALRWDLQNVLQEKLDMSEYHAEVGDEFSYIRYNAVAEEFSEEVAKGCIIRQISPGLEIKGNVLRAADVIKSKGSEAAEQ 276          
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: A0A7S2V060_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V060_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.270e-12
Identity = 55/182 (30.22%), Postives = 96/182 (52.75%), Query Frame = 0
Query:  117 EVDPMAEVKQQIKDLETALMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEA----AEEALNLETETEVKYNKSYQALYRQLKDVFAKIGATDFFGVVGEKFVFTRHEKAS--EEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLGP 292
            E DP+AE+KQQI+                +  + + G+ G++ +AA+ DN+++SS +        A A V+   +P  + FEA    AE   NL +E  +K +++YQAL RQ+  +F  +GA+ F   VG +    ++  +S  E  N   K+G++++ +  G E+   +IR A CV+ + P
Sbjct:   96 EADPLAELKQQIEXXXXXXXXXXXXXXISKRKILDNGKTGYVTIAAEADNYKRSSKSTIDSLGTRAMAEVISDFMPLVDKFEAIKETAEATENL-SEDVLKIHRNYQALPRQMMTIFEGLGASSFDATVGSQIDPIKNVASSTREPANDKEKDGMVVEALKSGFEINGVIIRPASCVMCVVP 276          
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: A0A7S1T8I4_9CHLO (GrpE protein homolog n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T8I4_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 3.960e-11
Identity = 53/165 (32.12%), Postives = 82/165 (49.70%), Query Frame = 0
Query:  133 TALMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFAKIGATDFFGVVGEKFVFTRHEKASEEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLGPEKKDE 297
            T  + E N    +Q+S+    +  +LR  A  +NFRK S           K  V+   LP  + FE A + L LETE E K + SYQA+YRQ+ ++F  +G T     VG+ F   +HE   +E +  +++GLI+     G  L   ++R A+  V++    K E
Sbjct:  138 TESVNEVNAAVKLQESIALAAKEQYLRSTADFENFRKRSQIEKDALRDSVKGDVVSDFLPLVDNFELASKQLKLETEAEKKIDASYQAMYRQMVEIFKNLGVTAV-ETVGKPFDPEKHEAIMQEESTEVEDGLILDEFRRGFMLGSKLLRPAMVKVAINHLPKTE 301          
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Match: A0A843TTK2_COLES (GrpE protein homolog n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843TTK2_COLES)

HSP 1 Score: 73.6 bits (179), Expect = 5.040e-11
Identity = 46/146 (31.51%), Postives = 75/146 (51.37%), Query Frame = 0
Query:  153 GQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFAKIGATDFFGVVGEKFVFTRHEKASEEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLGPEKKDEP 298
            G+  FLR+ A ++NFRK S      + +D +  ++ ++LP  + FE + + +  ETE E K + SYQ +Y+Q  ++   +        VG++F    HE      +   KEG I++ VS G  L   ++R A   VS GP  K+ P
Sbjct:  150 GKEKFLRVNADLENFRKRSEKDRLSFTSDIQRDLIESLLPIVDSFEQSRQQIKPETEKEKKLDTSYQGIYKQFVEILRSLRVA-VIETVGKQFDPLMHEAIGRVESHKYKEGFIVEEVSRGFLLGDQILRPAKVKVSAGPADKNSP 294          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig855.19953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LSM3_ECTSI1.950e-14182.95Co-chaperone grpE family protein n=1 Tax=Ectocarpu... [more]
A0A6H5KMN5_9PHAE5.770e-10690.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZD01_9STRA8.820e-2649.24GrpE-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5KJC6_9PHAE1.640e-2272.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XS89_HETAK1.090e-1432.94Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S4D635_HETAK3.080e-1432.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2LF94_9STRA1.590e-1332.04Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2V060_9STRA4.270e-1230.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1T8I4_9CHLO3.960e-1132.12GrpE protein homolog n=2 Tax=Tetraselmis chuii Tax... [more]
A0A843TTK2_COLES5.040e-1131.51GrpE protein homolog n=1 Tax=Colocasia esculenta T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..148
NoneNo IPR availablePANTHERPTHR21237:SF4GRPE PROTEIN HOMOLOGcoord: 120..302
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 119..289
e-value: 1.2E-17
score: 64.1
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 120..302
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 101..232
e-value: 2.5E-6
score: 29.0
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 155..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig855contigEcto-sp13_S_contig855:2291..7903 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig855.19953.1mRNA_Ecto-sp13_S_contig855.19953.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig855 2291..7903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig855.19953.1 ID=prot_Ecto-sp13_S_contig855.19953.1|Name=mRNA_Ecto-sp13_S_contig855.19953.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=351bp
MHERRSATTSTLSRGAQRTRGTPLLSPGALRTSGYRKRGVRLMMAAEPAE
DSVAEAAAAAAAAAAAAAAAEEPSISEGEEAVEDDEASGGEDGETEVVAE
EGDGKEEEKEEDGEEEEVDPMAEVKQQIKDLETALMKEENRLRDVQDSVQ
EKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAA
EEALNLETETEVKYNKSYQALYRQLKDVFAKIGATDFFGVVGEKFVFTRH
EKASEEHNPVMKEGLIIKCVSPGLELKRNVIRKAVCVVSLGPEKKDEPKE
EEEEEAAAPAAAAAEGEAAAEAEEPPPMRDAGVDAAVPKGEQAEGEQAAA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR013805GrpE_coiled_coil