mRNA_Ecto-sp13_S_contig8547.19949.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8547.19949.1
Unique NamemRNA_Ecto-sp13_S_contig8547.19949.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: D7FJB9_ECTSI (Catalytic/ hydrolase/ phosphoglycolate phosphatase/ phosphoric monoester hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB9_ECTSI)

HSP 1 Score: 513 bits (1321), Expect = 1.260e-177
Identity = 253/256 (98.83%), Postives = 255/256 (99.61%), Query Frame = 1 
Query:    1 DRLRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDFFPYYT 768
            DRLRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSK VELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYII+KYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDFFP+YT
Sbjct:  106 DRLRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKGVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIQKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDFFPFYT 361
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: A0A6H5JNQ2_9PHAE (PGLP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ2_9PHAE)

HSP 1 Score: 492 bits (1266), Expect = 2.670e-169
Identity = 250/274 (91.24%), Postives = 253/274 (92.34%), Query Frame = 1 
Query:    1 DRLRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVY---------------IVG---EVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDFFPYYT 768
            DRLRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKV+                VG   + GIEEELDLIGVPHFGGPSDGSK VELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYII+KYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDFFPYYT
Sbjct:   87 DRLRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVHGGARVSVKYGQDVGAKVGGQADAGIEEELDLIGVPHFGGPSDGSKGVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIQKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDFFPYYT 360
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: A0A7S0PYB2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PYB2_9EUKA)

HSP 1 Score: 422 bits (1084), Expect = 7.610e-142
Identity = 202/251 (80.48%), Postives = 222/251 (88.45%), Query Frame = 1 
Query:    1 DRLRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDF 753
            D LR++GKR+FFVTNNSTKSRKGY  KF  LGL+V PEEIFSSSFAAAAYLEQT+FKD+GKKVYI+GEVGI+EELDLIGV H GGP D  +++ELK GFALPHDENVGAV+VGFDR INYYKIQYAQLCINENPGCEFI TN DAVTHLTDAQEWAGNGAM GAIKGCTGVEPT+VGKP  LMIDY+++KY + R RICMVGDRLDTD+LFG NNGL S LTLSGVTTEEKLLSP+N I PD+YV SI  F
Sbjct:  102 DMLRKSGKRVFFVTNNSTKSRKGYLGKFTGLGLNVAPEEIFSSSFAAAAYLEQTKFKDSGKKVYIIGEVGIQEELDLIGVAHIGGPEDAHEKIELKSGFALPHDENVGAVIVGFDRNINYYKIQYAQLCINENPGCEFIVTNLDAVTHLTDAQEWAGNGAMAGAIKGCTGVEPTLVGKPSALMIDYMVDKYGISRDRICMVGDRLDTDILFGQNNGLKSCLTLSGVTTEEKLLSPDNAIKPDFYVESIAQF 352
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: A0A7S3RB74_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RB74_9SPIT)

HSP 1 Score: 413 bits (1061), Expect = 8.900e-139
Identity = 199/250 (79.60%), Postives = 225/250 (90.00%), Query Frame = 1 
Query:    7 LRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLS-VEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDF 753
            LR+AGK++FFVTNNSTKSRKGY  KF SLGL   + EEIFSSSFAAAAYLEQT+FK+TGKKVYI+GEVGIEEELDLIGVP  GG +D  K++ELK G+ALPHD++VGAV+VGFDR INY+KIQYAQLCINENPGCEFIATN DAVTHLTDAQEWAGNGAM GAIKGCTG EPT+VGKP PLMIDY+++K+ +ER RICMVGDRLDTD+LFG NNGL+S LTLSGVTTEEKL+SPEN I PD+YV+SI DF
Sbjct:   75 LRKAGKKVFFVTNNSTKSRKGYLGKFKSLGLEDTQAEEIFSSSFAAAAYLEQTKFKETGKKVYIIGEVGIEEELDLIGVPWIGGGADAGKKIELKSGYALPHDKDVGAVIVGFDREINYHKIQYAQLCINENPGCEFIATNLDAVTHLTDAQEWAGNGAMAGAIKGCTGREPTLVGKPSPLMIDYMVDKFGIERGRICMVGDRLDTDILFGQNNGLLSCLTLSGVTTEEKLMSPENSIKPDFYVDSIADF 324
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: B8LDT0_THAPS (Phosphoglycolate phosphatase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDT0_THAPS)

HSP 1 Score: 412 bits (1058), Expect = 9.440e-139
Identity = 197/252 (78.17%), Postives = 225/252 (89.29%), Query Frame = 1 
Query:    1 DRLRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDFF 756
            ++LR  GK+++FVTNNSTKSR GYK KFDSLGL+V  EEIFSSSFAAAAYLEQ++FK+TGKKVY+VGEVGI+EELDLIGVPHFGGP D +K+ ++ PG  + HDE+VGAVVVGFDR INYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNG+MVGAIKGCTG EPT+VGKP PLMIDY+ +K  ++R RICMVGDRLDTD+LFG++NGL S+L LSGVTTEEKLLS EN I PDYY +SI DFF
Sbjct:   38 EKLRALGKKMYFVTNNSTKSRAGYKKKFDSLGLNVPAEEIFSSSFAAAAYLEQSKFKETGKKVYVVGEVGIQEELDLIGVPHFGGPEDANKQPDMGPGCMVEHDEDVGAVVVGFDRNINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGSMVGAIKGCTGREPTVVGKPSPLMIDYLCDKLGLDRGRICMVGDRLDTDILFGSDNGLKSLLVLSGVTTEEKLLSQENVITPDYYADSIVDFF 289
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: R1BV30_EMIHU (Phosphoglycolate phosphatase n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BV30_EMIHU)

HSP 1 Score: 414 bits (1063), Expect = 1.220e-138
Identity = 200/250 (80.00%), Postives = 224/250 (89.60%), Query Frame = 1 
Query:    7 LRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLS-VEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDF 753
            LR AGK++FFVTNNSTKSRKGY  KF SLGL   +PEEIFSSSFAAAAYLEQT+FK++GKKVYI+GEVGIEEELD+IGVP  GG SD  K++ LK G+ALPHD +VGAV+VGFDR INY+KIQYAQLCINENPGCEFIATN DAVTHLTDAQEWAGNGAM GAIKGCTG EPT+VGKP PLMIDY++EK+ +ER RICMVGDRLDTD+LFG NNGL+S LTLSGVTTEEKLLSPEN+I PD+YV+SI DF
Sbjct:  105 LRAAGKKVFFVTNNSTKSRKGYLGKFKSLGLEETQPEEIFSSSFAAAAYLEQTKFKESGKKVYIIGEVGIEEELDMIGVPWIGGGSDAGKKIALKSGYALPHDSDVGAVIVGFDREINYHKIQYAQLCINENPGCEFIATNLDAVTHLTDAQEWAGNGAMAGAIKGCTGREPTLVGKPSPLMIDYMVEKFGIERGRICMVGDRLDTDILFGQNNGLLSCLTLSGVTTEEKLLSPENEIKPDFYVDSIADF 354
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: A0A7S2V044_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V044_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 3.990e-138
Identity = 201/252 (79.76%), Postives = 221/252 (87.70%), Query Frame = 1 
Query:    1 DRLRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDFF 756
            ++LR AGK++FFVTNNSTKSR GYK KF  LGL V+ EEIFSSSFAAAAYLEQT+FK+TGKKVY+VGEVGI+EELDLI V HFGGP D  KEV L PG A+ HD++VGAVVVGFDR INY+KIQYAQLCINEN GCEFIATN DAVTHLTDAQEWAGNG+MVGAIKGCTG EPT+VGKP PLMIDYI+EKYNVER RIC+VGDRLDTDVLFG NNGL S L L+GVTTE KL+S ENKI PD Y +SINDFF
Sbjct:   97 EKLRAAGKKMFFVTNNSTKSRAGYKKKFTDLGLDVQAEEIFSSSFAAAAYLEQTKFKETGKKVYVVGEVGIQEELDLIEVDHFGGPQDAGKEVVLGPGVAMEHDKDVGAVVVGFDRYINYHKIQYAQLCINENEGCEFIATNLDAVTHLTDAQEWAGNGSMVGAIKGCTGKEPTVVGKPSPLMIDYIVEKYNVERERICVVGDRLDTDVLFGKNNGLQSCLVLTGVTTESKLMSAENKIIPDVYADSINDFF 348
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: A0A7S0EXH5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EXH5_9EUKA)

HSP 1 Score: 410 bits (1054), Expect = 3.690e-137
Identity = 197/249 (79.12%), Postives = 222/249 (89.16%), Query Frame = 1 
Query:    7 LRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDF 753
            LR+AGK+IFFVTNNSTKSRKGYK KF SLGL VEPEEIFSSSFAAAAYLEQT+FK++GKKVYIVGEVGI+EELDLIGVP+ GG +D  K+VELK G+ALP+D++VGAV+VGFDR INYYKIQYAQLCINENPGC+FI TN DAVTHLTDAQEWAGNGAM GAIKGCTG EP +VGKP  LMIDYI++KY  +R +ICMVGDRLDTD+LFG NNGL+S LTLSGVTTE KLLS EN + PD+YV SI +F
Sbjct:  114 LRKAGKKIFFVTNNSTKSRKGYKGKFTSLGLDVEPEEIFSSSFAAAAYLEQTKFKESGKKVYIVGEVGIQEELDLIGVPYIGGEADADKKVELKSGYALPYDKDVGAVIVGFDRNINYYKIQYAQLCINENPGCQFIVTNLDAVTHLTDAQEWAGNGAMAGAIKGCTGQEPVLVGKPSALMIDYIVDKYKCDRGKICMVGDRLDTDILFGQNNGLLSCLTLSGVTTEAKLLSKENTVKPDFYVGSIAEF 362
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: A0A7S2JDJ9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JDJ9_9EUKA)

HSP 1 Score: 409 bits (1052), Expect = 7.930e-137
Identity = 202/250 (80.80%), Postives = 221/250 (88.40%), Query Frame = 1 
Query:    7 LRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLS-VEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDF 753
            LR AGK+IFFVTNNSTKSRKGY  KF SLGL  VE EEIFSSSFAAAAYLEQT+FK+TGKKVYI+GEVGIE+ELDLIGVP  GG SD  K++ELK G+ALPHDE+VGAV+VGFDR INY+KIQYAQLCINEN GCEFIATN DAVTHLTDAQEWAGNGAM GAIKGCTG EPT+VGKP PLMIDYI++KY  +R RICMVGDRLDTD+LFG NNGL+S LTLSGVTTE KLLS +NKI PDYYV+SI  F
Sbjct:  115 LRAAGKKIFFVTNNSTKSRKGYLGKFQSLGLDGVEAEEIFSSSFAAAAYLEQTKFKETGKKVYIIGEVGIEQELDLIGVPWIGGGSDAGKKIELKSGYALPHDESVGAVIVGFDREINYHKIQYAQLCINENEGCEFIATNLDAVTHLTDAQEWAGNGAMAGAIKGCTGREPTLVGKPSPLMIDYIVDKYGCDRERICMVGDRLDTDILFGQNNGLLSCLTLSGVTTETKLLSADNKIKPDYYVDSIAQF 364
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BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Match: A0A7S1UDJ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDJ5_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 6.870e-136
Identity = 195/249 (78.31%), Postives = 217/249 (87.15%), Query Frame = 1 
Query:    7 LRQAGKRIFFVTNNSTKSRKGYKSKFDSLGLSVEPEEIFSSSFAAAAYLEQTRFKDTGKKVYIVGEVGIEEELDLIGVPHFGGPSDGSKEVELKPGFALPHDENVGAVVVGFDRMINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIKGCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNGLMSILTLSGVTTEEKLLSPENKINPDYYVNSINDF 753
            LR +GK++FFVTNNSTKSRKGY  KFD LGL V PEEIFSSSFAAAAYLEQT+F +TGKKVYI+GEVGIEEELDL+ +PH GGP D  K  ++ PG  + HD +VGAV+VGFDR INYYKIQ+AQLCINEN GCEFIATN DAVTHLTDAQEWAGNG+MVGAIKGCTG EPT+VGKP PLMIDYI+EK+ V+R RICMVGDRLDTD+LFGANNGL S LTLSGVTTEEKL S EN+I PDYYV+SI DF
Sbjct:   68 LRASGKKMFFVTNNSTKSRKGYGKKFDGLGLQVNPEEIFSSSFAAAAYLEQTKFAETGKKVYIIGEVGIEEELDLLNIPHIGGPGDKDKAPDMGPGGKVEHDHDVGAVIVGFDRHINYYKIQFAQLCINENEGCEFIATNLDAVTHLTDAQEWAGNGSMVGAIKGCTGKEPTLVGKPSPLMIDYIVEKFGVKRDRICMVGDRLDTDILFGANNGLKSCLTLSGVTTEEKLFSEENQIKPDYYVDSIADF 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8547.19949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJB9_ECTSI1.260e-17798.83Catalytic/ hydrolase/ phosphoglycolate phosphatase... [more]
A0A6H5JNQ2_9PHAE2.670e-16991.24PGLP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A7S0PYB2_9EUKA7.610e-14280.48Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S3RB74_9SPIT8.900e-13979.60Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
B8LDT0_THAPS9.440e-13978.17Phosphoglycolate phosphatase n=1 Tax=Thalassiosira... [more]
R1BV30_EMIHU1.220e-13880.00Phosphoglycolate phosphatase n=3 Tax=Emiliania hux... [more]
A0A7S2V044_9STRA3.990e-13879.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0EXH5_9EUKA3.690e-13779.12Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S2JDJ9_9EUKA7.930e-13780.80Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S1UDJ5_9STRA6.870e-13678.31Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8547contigEcto-sp13_S_contig8547:2..6809 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score289.7
Seed ortholog evalue7.6e-76
Seed eggNOG ortholog2880.D7FJB9
Preferred namePGP
Model size1602
KEGG rclassRC00017,RC00151
KEGG koko:K01101,ko:K19269
KEGG ReactionR01334,R03024
KEGG Pathwayko00627,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,map00627,map00630,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0044237,GO:0044424,GO:0044444,GO:0044464
Exons9
EggNOG free text desc.phosphoglycolate phosphatase activity
EggNOG OGsCOG0647@1,KOG2882@2759
EC3.1.3.18,3.1.3.41,3.1.3.48
Cds size423
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8547.19949.1prot_Ecto-sp13_S_contig8547.19949.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8547 833..3854 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464124.9702272-UTR-Ecto-sp13_S_contig8547:1..8321681464124.9702272-UTR-Ecto-sp13_S_contig8547:1..832Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8547 2..832 -
1681464125.0342567-UTR-Ecto-sp13_S_contig8547:3854..38771681464125.0342567-UTR-Ecto-sp13_S_contig8547:3854..3877Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8547 3855..3877 -
1681464125.046467-UTR-Ecto-sp13_S_contig8547:4530..45941681464125.046467-UTR-Ecto-sp13_S_contig8547:4530..4594Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8547 4531..4594 -
1681464125.0609233-UTR-Ecto-sp13_S_contig8547:5081..51561681464125.0609233-UTR-Ecto-sp13_S_contig8547:5081..5156Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8547 5082..5156 -
1681464125.0729332-UTR-Ecto-sp13_S_contig8547:5643..57301681464125.0729332-UTR-Ecto-sp13_S_contig8547:5643..5730Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8547 5644..5730 -
1681464125.0841923-UTR-Ecto-sp13_S_contig8547:6253..63261681464125.0841923-UTR-Ecto-sp13_S_contig8547:6253..6326Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8547 6254..6326 -
1681464125.1242037-UTR-Ecto-sp13_S_contig8547:6783..68091681464125.1242037-UTR-Ecto-sp13_S_contig8547:6783..6809Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8547 6784..6809 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464124.9831269-CDS-Ecto-sp13_S_contig8547:832..9321681464124.9831269-CDS-Ecto-sp13_S_contig8547:832..932Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8547 833..932 -
1681464124.9934523-CDS-Ecto-sp13_S_contig8547:1807..18941681464124.9934523-CDS-Ecto-sp13_S_contig8547:1807..1894Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8547 1808..1894 -
1681464125.0046484-CDS-Ecto-sp13_S_contig8547:2814..29391681464125.0046484-CDS-Ecto-sp13_S_contig8547:2814..2939Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8547 2815..2939 -
1681464125.018591-CDS-Ecto-sp13_S_contig8547:3743..38541681464125.018591-CDS-Ecto-sp13_S_contig8547:3743..3854Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8547 3744..3854 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8547.19949.1

>prot_Ecto-sp13_S_contig8547.19949.1 ID=prot_Ecto-sp13_S_contig8547.19949.1|Name=mRNA_Ecto-sp13_S_contig8547.19949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp
MINYYKIQYAQLCINENPGCEFIATNTDAVTHLTDAQEWAGNGAMVGAIK
GCTGVEPTIVGKPGPLMIDYIIEKYNVERSRICMVGDRLDTDVLFGANNG
LMSILTLSGVTTEEKLLSPENKINPDYYVNSINDFFPYYT*
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mRNA from alignment at Ecto-sp13_S_contig8547:2..6809-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8547.19949.1 ID=mRNA_Ecto-sp13_S_contig8547.19949.1|Name=mRNA_Ecto-sp13_S_contig8547.19949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6808bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8547:2..6809- (Ectocarpus species13 EcNAP12_S_4_19m)
GACCGTCTACGACAGGCCGGAAAACGGTGAGGCTCTCGTTAACCGGTAGC
AGATGGCGGGTTGCTTTGGCTGGGAGAGCGAGCAGAGATCGTGCGGTTGT
CGAGCCGATCCACTTCGTAAAACGCGCGTGTATTGGGAGAGGGTTACATA
TGTACGACACTGGTAAGTCATCTAGCCCATGAGTTAGTTCACCGCTTTTG
TCGTCAAACGCACGGTAAGAAGTGAATATGCTCTGCGTTTATGAGAAGCA
AAATAACAGCGTTTTGAGCAACGTTTCAAAAAAACGTGGTAGTTGACTCT
GTGGGTATTTTTGCAAGAAAGGTTGCAGTAACGAATACCCTAGGCAACAA
TTACTTTGGGGAAGACAATAACCTACGCCAAAATGTTCGTGTCTTGTGTT
TTGTGGTACACTTCTACGGACTTGGTTGTTTTGACTCCCTTCCCCAACCC
CCCCCCGTCGATGAACGCTCGGCGGCGCCGCAGGATATTCTTTGTGACGA
ACAACTCTACCAAGAGCCGCAAGGGTTACAAGTCCAAGTTCGACTCCCTC
GGGTTGGTGAGTGAGCGCGGTTCTTATTTGTTTCTTTTTTCTTGTCGATG
TTCTTTCCTGTGTCCGTTGAGATTTTCGCCTCTATGTCTTTTCTTTTATT
TCTGTCTTCTGTTCCTCTTTTTCTGCTTGTGAAGATATTTTTCCTTTTGT
CTTCCTGTCGGCCAAGAAACCGTCCTCGTGCACTTTTCCTTTCTCTGCCA
AAATCTCCAAACAAAGGGTGTAGCGTAGTATTTGGTCAACGTGAGTCTTT
CCGGTGGAGTCTTAACGAGTGCATTGAACGGAGCTGCTTCCATAGTACTA
AATAGTGCACAGATTATATAGTGAAACCCTATCCGCTTGTCCGGAGGTGA
CCAAACTTGGATATTGGCTGGATACGGGCTGGATATTGGCATGGGTACCC
CCTCGCGCCCCCTCTTTATCTCCAATTTGTCCGTTCCGCCCCCGTCTCTT
TGACTTTTTTTTTTTACTTCACCACCCCACACGTCCTCTCCTGTACACAA
TTCTTATCCGCCGACCTCCCTTTCCGCAGAGTGTGGAGCCCGAGGAGATT
TTCTCGTCGAGTTTTGCGGCCGCGGCATACCTAGAACAGACGAGGTTTAA
GGACACCGGGAAAAAGGTATTGCCTATCTTTGTCTTGGCTGGGTTTGCCG
ATCTTTTTTGCCACCGTTTTCGGCGCGACAGAAGGTTGCCGTTTATCAGC
CAAGCGCAGCAAGTGGGGCTTGCAAATCGAGCAACTGGCGGCGTTCCGAA
GCATCGGGTACCCAATTGGATGAATCGGGGTCGTTTTACAGCTCGTGAAC
AGCTGTGCGTACGCAGGAAGAATGTCGGTTGGTAAGAAGCAGATAGACAG
AGATGGATGGTACAGTGATGAAGGCGCACGTACACGGCGGTGCCAGAGTA
TCAGTGAAGCATGGACAGGACGTCAGCGCGAAAGTTGGAGGACAAGCACA
TGCAGGTCTGCCATGCATCCTCTCGTCGTGCCGTTGGTTGCCCGTCGCTT
GCGAATCCCGACCATCCTACGACTTCGTGACCCCGACTGTCACACCAACA
AAGCCTTCGGTTTTTCGTTTCTTTTGGGTGTTTTTTCGTGTGTTACGTCC
AAGGTGTACATCGTGGGTGAAGTGGGCATCGAGGAGGAGCTAGACCTCAT
CGGCGTGCCTCACTTCGGGGGACCCTCGGTAAGCTTAAGCTTGTAGGGCA
AAACACATGGAATGCATCGCAGACGGAGTTCCCACATGTCTTGACACCCC
GAATCGGAGCTGGGAGCGCTCGATGTAAGGTTAACGACAGGACTCGTGGC
GTGCATTGCAGACAGAAGCCTTGCGTGCTTTGCACCCCGGATCGGAGCTG
GGGGCGCCCTGTAAATTCTAGGATAGGAATCACGGCGTGCGTCGTGGACG
GAGTTCCTACGTGTTGGAACACCGCCGATCGGAGTTCCGATCAGGAGAGT
CATCAGCGGATGGACGTAGACCACTGCTGTACCGGGTAGAGGCGTGAATG
TAGAGCTACATTGGAGTTCGGCCAGATTTCGAAGAAAATAAACAGTTTCC
CTAAATAATTTAGCGTTTTACTGGCGTGTCTTCCCCATATATTCAAAAGC
ACTTGAAACGAATCAAACACACACCATTCCCTGAACATGGATTGTTGTTT
TTCGTGCCCACGCAGGACGGGAGTAAGGAGGTGGAGCTCAAGCCGGGCTT
CGCCCTCCCGCACGACGAGAACGTGGGAGGTATGAATCGGCCGGAGTTGT
CCCGCGTCGACTGCCTTTTTGGTGTGTGACATACTTCATTCTATCGTGTA
GACACTCATTTTCTTGAGCTGGGGATGGATCTTGCCCGGTTGATGGTGTT
GTCAGGTACCGTGTATCTACATCCATACCAATATTTCATCTTTTGTCAGC
AAATTCTTAAGGGCTACGCGCGGCCTCGCGGAAGCGTCGCAACGGGCTCC
GTCCCGTCTATCTACAGCCCCCAAGGGGCACAGGAAAGGGAACAACTAGT
AAGAGAACGAAGGAATTTAGGGTGGACTTTCTGTGATTCTTTGTATGTTT
TCTATTACTTGTGACATGAACTCCCTTTCAACTGCCTCTCCACTCCCACC
GGGATGACCTAAACATGCCACACCTTTCACAACCTCTACGGCTAGCTTGA
AAAGTCGTGTACTGCAAGGGTAGTCTTCCATGTGGCGCCGAAATTTCGAA
TTTCCAAAAGAGGAAGCAAGACCGTCCGGTAGAGGAAGGAAGGTGACATG
GCCGATGCTAAAAAACACAGAAACCAATGACCTCTTGACCTTTGAACGTC
GTCCTATCTTTGCGGCATTTACAGGCTCTGTTTGCCCTCCTCGTTTCTCT
TTCTTTTTCTTTTTTTTGTTCTTTTTTTTAAGCCGTGGTCGTCGGGTTCG
ACAGAATGATCAACTACTACAAGATTCAGTACGCCCAGCTGTGCATCAAC
GAGAACCCCGGGTGCGAGTTTATCGCCACCAACACGGACGCGGTCACCCA
CCTCACCGACGCGCAGGTCCGTCCGTGTGGACACGCAGCAGTTTGTGTCC
CACCTTGATCAGAAAATATTGTTCGCACAACCACACCAAGAGTATGTTGT
TGACATGTGCAGGAATGGATAAGCTATTTGTCTGTGGGAATATGAGGGTG
CATGATAGACGCAGCGGAAAGTCCAAGGCCTGTCCGGATGTACATTTTTT
GGCGTGTTTGGAGGAGGGTAGCTGCTACATACGAGGCGCGTGGATGTTTG
TTGTTTCAATCACCCTTTCCTCTCCGAGCTGTTTTTCCCAGGTTGTACGT
CGAGAGTCATATCAACTTGCGCACCAGTGTGATATTTATTGGCTTTTTCG
AGGAAAAACAAGCGTCGCTGCGAGTGTGTACATTGTTTCTCGCTCAGAGG
GGGAGTCACAGTGCGCTGCCATATTTTTCCTACACGCTCGTTTGCGCTCG
ACGACTGCGGAGGGTTCAATCCAATAACAACGCGTCACCACGCATCTGAG
AAATTTGTAGTTGAGAAATTAAGGGTTGGATTTTGACGATGTGAAAGTAT
TTGTGACCTTCCCACACGAAGGGTCTGTTTTCCCCGTCGATTCCCCACTG
ATCTAATATGGAGCGAGGGCTGCGCAAAACAGGGTTTCTTAGCGCTCATC
ACACACCCCCAATCATGTGTTTCTTGTCCAGGATATCATATTCCATGCAA
CCTACTCCAGTGTAACTTTTCTGCAATATGTGTGTCGCGGTCCCTTCACC
CCAGCGTACGCATCTACGGCGCTGAGCGTGTGTTTGCCTGACAACAATGT
ACTCACCTCAATCCTGGCAGGAGTGGGCTGGGAACGGCGCGATGGTCGGA
GCTATCAAGGGGTGCACCGGGGTGGAGCCGACGATCGTGGGCAAGCCTGG
TCCCCTGATGATCGATTACATCATCGAGAAGTACAATGTTGAGAGGTAGG
CGCAACCGCGAGAGTGTTGCGCGAAGTTGCCTGCGTGTGTATGATGGTCG
ACGTGTGTTGATGATGATTAACCCATGTTGATCGTGGTCAACTCTTGATG
GTCGACTTGTGTTGATCGTGGTCAACTTATGGTGATGCGTTGTCCTCAGC
ACATGCGGGTCACGGCAGTGTTCTGCTGCGTATGGAGCGTCACACAACTA
GAGGTTGAGGCCGGAACTCCTACATATATTATTGACGTGTATGTGGCGAA
TGGGGAGACTCTCGACCCGCTTCCCGCGGAAACCCTGCATGGCCATGAGA
ACAGAAACCAAGGTTTTTACCCTGGAGCCGTGATGTTATTTTTCACAGCA
GCGGTGATCGTTTCAGTCTCTCGACCCAGTGCGACTCCTGTGCGACAGTC
TGATGTCCTCCTCCTCCCTTGATTGGGCTCAAGGTTGAAAGGGAGGTGTT
GGGTTGCAGAAAAGCCTGCGCGATGATCGTAGGGACGCACACCCAAAGAG
ATCCCTCCCCGAAATACATAAAAGTCGTTGTGGTCCAGACTGTGCAACAA
CAACAACAACAACAACAACATCATTTGTGCTTGTGCGTATTCGTGTGGTT
TTTGGCGTAGTGTCGACCGCGCTAACTGGCTGACCAAGGAGAAGACGTCA
GTGTTATAGCGGGATCGAAAGCGCGAACGAACAAGCTTGCTAGTGGTAAG
GGTTGTACCGACAGGGGTGGGCGCAGGAATTGGCCCAGTGCTTGTGTGTG
TATGATTCCTTGTCTTGATTTTGCAGACCGGCAGGTCGGTCTTGGGCATG
GTTGGCGACACAACTGGACATTTATTGCAACATCAGTAGCAGCAGCAACC
CAACAACAACCCGCGCTTGTGTCTCGTGTGCATGTATATTTCTCCTTGTC
TTCTTCAACTCACAGGTCGCGCATTTGCATGGTCGGCGACCGCTTGGACA
CCGACGTGCTTTTCGGAGCCAACAACGGCCTGATGAGCATCCTCACATTG
AGGTGGGTTTCGGTTGTTGACTTTTCGTTTTCAGTTCTTGGTTTTGCGTT
GTGTCTCGCCATATAACAATGTTCGCTCTTGATGGTTGCTGTCTCGGGAA
GCCTTGAGAAGCGCCTCCACCTGGACTTGGGTGAGTTTGAGACTGCCTGT
GCTTCCTTGGTTTGCCGCGTGTCTTTGTCGTACTTCATCGCCCTGCGGTT
TGTTGTCGTTGTCCAACCATGGATGCATGGATCACAATCGTATTCGAGCA
GTTTCTGCGTCTGTTGTATTGTACATCAACGCCTTGCGTTCTGCACCCTT
TTGCTCGCCTTTTTATTTGTTTGTTTTCTGGGCGATAGAGCTCGGACTCC
ACGCACGCTTTGTTCCCAAAGTTCTTTGGGAATGCCAATCAGCCGAAACA
GAAACGACGCTACTCCGTTGCGCTAGATTCAGGCGTATTGAATGGTTGAA
GCCTAGACGTACAAGTCCACCCCTGCGTTCTCAGCAGTACTTATCGCGTA
ATCGCAAAGCGTTTTATCCCGACTTTATGCGGGTGCGAGAGTGTCTGCAG
CCAACACGGTACGACTCCGAAGAGCACATTTCGTCAACCCGCGCATGGCC
GTAAGGAACAAAACGAAGCCGTCCCGGAAACGTATTGAAGACAGCAGTCC
AAATTGTTTAAGGCAAATTTGCACTCAGGTTGATCGGTGACCGCGGTGCA
CGCACGCATTTTTTGTTGCCTTTCCCCCTCCGGCTGTGACGAACCCACGA
AGCCAAGATACCAACGATGTTGCCGTTTAACTCCGCTTAGTGGCCTCGTC
GACATCCATGTCTCACCCACGCGTTGTCCCCCCCACTATCTGCACGCGCC
ACCTTCTTCCTGTGCTGCTCAATCCAGCGGCGTCACGACCGAGGAGAAGC
TGCTTAGCCCGGAGAACAAGATCAACCCTGACTACTACGTAAACAGCATC
AACGACTTCTTCCCTTACTACACGTAGTAGACACGCGGGGTTGTCCTCAT
TGGTGGACGTTTCGTGTGAACACGGAACGGCTGCAAGAGAAACAAAGCAT
GTCCTCCTTTTCGCGTCGAAGACGGTGCTTCTTCCCTCGTGGGACCAGAT
GAGACGTGTGTATCCCGTCTCAGACGGCATCAATAGCAAAGATACGCTGA
GGATATGACGATTTTTACCGCAATGGTTTGTCTTCATTTTGCTCGCTGCC
TAGGTGTGGTGTTGTTGTATGGATATGCACTACCGTATACTCGGGACGAC
GTTTTCACTGACTAAAAAGAAGGCGAAGTAGATCATTACGGCGACCGGAG
TATTGATGTTTTTAGTCCACCCGATGCTAGACAGATTTTTTGTAGTTACA
ACTCTGTACCGGCCAGTTATGGTAAGAAACTTATCCACCGTTGAGCTGTG
TTTTCACCCCCAAAATCTTCGGGGAGAAATTGAAAAGGTGGTTTGTCTCT
CTAGCGGCCAGGTACTACTGCCGTAATGCTGCGCTCGTTCTGGCACATCG
TTGCACTTGTTGCTGCGAAGGAAATAGAGGTGTCACGAGTCCAGATGATG
CAGATAGAGTTAATAGATGGCGGGATGTTTATATTTGACAGCCTCCTGAT
AGTCGGTGTGATGGGTCGACCGCGACAAAATTGATGCTTCCAATCATTCC
CGCGAAAGGGTTTTCTTGTTTTCTTCTCTACCGGTGGGTCTTGCTTTGCA
GGGCGAAAACTGTAATGGTTTGAACGGTAGCAGATACCGAGAGGGTGTTT
TCCATGTCTTTTTGCACGTCGATATTGCTGCAGATGATGTTGAAATTCGC
GCATTCGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8547:2..6809-

>mRNA_Ecto-sp13_S_contig8547.19949.1 ID=mRNA_Ecto-sp13_S_contig8547.19949.1|Name=mRNA_Ecto-sp13_S_contig8547.19949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=423bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8547:2..6809- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATCAACTACTACAAGATTCAGTACGCCCAGCTGTGCATCAACGAGAA
CCCCGGGTGCGAGTTTATCGCCACCAACACGGACGCGGTCACCCACCTCA
CCGACGCGCAGGAGTGGGCTGGGAACGGCGCGATGGTCGGAGCTATCAAG
GGGTGCACCGGGGTGGAGCCGACGATCGTGGGCAAGCCTGGTCCCCTGAT
GATCGATTACATCATCGAGAAGTACAATGTTGAGAGGTCGCGCATTTGCA
TGGTCGGCGACCGCTTGGACACCGACGTGCTTTTCGGAGCCAACAACGGC
CTGATGAGCATCCTCACATTGAGCGGCGTCACGACCGAGGAGAAGCTGCT
TAGCCCGGAGAACAAGATCAACCCTGACTACTACGTAAACAGCATCAACG
ACTTCTTCCCTTACTACACGTAG
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