prot_Ecto-sp13_S_contig8535.19936.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8535.19936.1
Unique Name	prot_Ecto-sp13_S_contig8535.19936.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	743

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8535.19936.1 vs. uniprot
Match: A0A6H5K3N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N5_9PHAE)

HSP 1 Score: 651 bits (1680), Expect = 5.430e-223
Identity = 544/723 (75.24%), Postives = 550/723 (76.07%), Query Frame = 0

Query:    1 GLFLAAYSGSLADVKSTLKNNALSVDVADPIKGSTALLWASAGGSLEVVEWLVKQAGANAGHRNKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNADLSVEAPSLKPTAQAPAITKSLEDARSGGGVATPAAAAPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPMRLLPKASAFPTSRPTTTVASARAAAKKMASPTSPRSPAGSPRSVXXXXXXXXXXXXXXXXXXVASRPAALEEKAAAGXXXXXXDAAKPDVAAAVAGPSSPSSPTEQPVAPSSSPTATLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GASKPQSPRAGGVLPRTGGTLPAPAAAAAPGSATGS-SSSAAKIVATGVKPGLVKQSSYLLRNASASSSSNAGRSGSGSVPSSNXXXXXXXXXXXXXXXXXXXXXXXXNAATPAASNGXXXXXXXXXXXXXXXXXXXXXXXXPSRFQRTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFENKARGGTTAAAKPTPVAKXXXXXXXXXXXXXXXXXSPVLTQGGGAAAATATQQPQSPKKQTQVRPTSPSKVTPESLLGKGTVMQRKKVYVAAAQKSGNGSPAPLIGKTRKEKDGSFMDKFVSMFTISPQSSPSPS 721
            GLFLAAYSG+LADVKSTLKNNALS DVADP KGSTALLWAS GGSLEVVEWLVKQAGANAGHRNKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNADLS EAPSLKPTAQAPAI KSLEDARSGGGV TPAAAAPAP XXXXXXXXXXXXXXXXXXXXXXXX      XXXXXX               AGPMRLLPK SAFPTSRPTTTVASARAAAKKMASPTSPRSPAGSPRSVXXXXXXXXXXXXXXXXXX      A+ EKAAA                    PSSPSSPTEQPV PSSSP A  S      XXXXXXXXXXXXXX             GASKPQSPRAGGVL         P+      SATGS SSSAAKIVATGVKPGLVKQSSYLLRNASASSSSN GRSGS S P   XXXXXXXXXXXXXXXXXXXXX   NAAT AASNG                        P+      P        XXXXXXXXXXXXXXXXXXXXX         ENKARGGTTAAAKPTPVAKXXXXXX           +PVLTQGG         QPQSPKKQTQVRPTSPSKVTPESLLGKGTVM RKKVYVAAAQKSGNGSPAPLIGKT+KEKDGSFMDKFVSMFTISPQSSPSPS
Sbjct:   13 GLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQAGANAGHRNKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNADLSAEAPSLKPTAQAPAIAKSLEDARSGGGVTTPAAAAPAPGXXXXXXXXXXXXXXXXXXXXXXXXASVPVAXXXXXXDGARAPQEV------AGPMRLLPKPSAFPTSRPTTTVASARAAAKKMASPTSPRSPAGSPRSVXXXXXXXXXXXXXXXXXXXXXXXXAVAEKAAAR-------------------PSSPSSPTEQPVVPSSSPKAKPSPGAAAVXXXXXXXXXXXXXXGLPRAAAAAAASSGASKPQSPRAGGVLXXXXXXXXXPS------SATGSTSSSAAKIVATGVKPGLVKQSSYLLRNASASSSSNGGRSGSSSGPXXXXXXXXXXXXXXXXXXXXXXXXTGNNAATLAASNGNGVSTAAAVTASPK----------PAAAAAPTPAANSATAGXXXXXXXXXXXXXXXXXXXXX---------ENKARGGTTAAAKPTPVAKXXXXXXARS--------APVLTQGGXXXXXXXXXQPQSPKKQTQVRPTSPSKVTPESLLGKGTVMHRKKVYVAAAQKSGNGSPAPLIGKTKKEKDGSFMDKFVSMFTISPQSSPSPS 677

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BLAST of mRNA_Ecto-sp13_S_contig8535.19936.1 vs. uniprot
Match: D7FHR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHR2_ECTSI)

HSP 1 Score: 496 bits (1277), Expect = 8.750e-164
Identity = 452/665 (67.97%), Postives = 466/665 (70.08%), Query Frame = 0

Query:   64 NKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNADLSVEAPSLKPTAQAPAITKSLEDARSGGGVATPAAAAPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPMRLLPKASAFPTSRPTTTVASARAAAKKMASPTSPRSPAGSPRSVXXXXXXXXXXXXXXXXXXVASRPAALEEKAAAGXXXXXXDAAKPDVAAAVAGPSSPSSPTEQPVAPSSSPTATLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASKPQSPRAGGVLPRTGGTLPAPAAAAAPGSATGSSS--SAAKIVATGVKPGLVKQSSYLLRNASASSSSNAGRSGSGSVPSSNXXXXXXXXXXXXXXXXXXXXXXXXNAATPAASNGXXXXXXXXXXXXXXXXXXXXXXXXPSRFQRTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFENKARGGTTAAAKPTPVAKXXXXXXXXXXXXXXXXX----SPVLTQGGGAAAATATQ-QPQSPKKQTQVRPTSPSKVTPESLLGKGTVMQRKKVYVAAAQKSGNGSPAPLIGKTRKEKDGSFMDKFVSMFTISPQSSPSPS 721
            +KDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKAD KATDLGGRMPGNADLS EAPSLKPTAQAPAITKSLEDARSGGG                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AGPMRLLP+ASAFPTSRPTTTVASARAAAKKMASPTSPRSPAGSP                       +R  A+ + A                                 V+P ++  A+ S                                GASKPQSPRAGGVLPRTGGTLPAPAA              +AAKIVATGVKPGLVKQSSYLLRNASASSSSN GRSGS       XXXXXXXXXXXXXXXXXXXXXX  +AATPA SNG       XXXXXXXXXX       PSRFQRTVP XXXXXXXXXXXXXXXXXXXXXXXX            FENKARGGTT AAKPTPVAKXXXXXXXXXXXXXXXXX    +PV+ QGG          QPQSPKKQ Q RPTSPSKVTPESLLGKGTVMQRKKVYVAAAQKSGNGSPAPLIGKT+KEKDGSFMDKFVSMFTISPQSSPSPS
Sbjct:   25 HKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADTKATDLGGRMPGNADLSAEAPSLKPTAQAPAITKSLEDARSGGGX----------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAGPMRLLPRASAFPTSRPTTTVASARAAAKKMASPTSPRSPAGSPSG---------------------ARSVAVLKSA---------------------------------VSPRAATAASASS-------------------------------GASKPQSPRAGGVLPRTGGTLPAPAATPTXXXXXXXXXXXAAAKIVATGVKPGLVKQSSYLLRNASASSSSNGGRSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSAATPAVSNGNGVSTAAXXXXXXXXXXATAAA--PSRFQRTVPAXXXXXXXXXXXXXXXXXXXXXXXXSRGPKASALAAAFENKARGGTTTAAKPTPVAKXXXXXXXXXXXXXXXXXXXXXAPVMAQGGXXXXXXXXXXQPQSPKKQAQARPTSPSKVTPESLLGKGTVMQRKKVYVAAAQKSGNGSPAPLIGKTKKEKDGSFMDKFVSMFTISPQSSPSPS 574

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BLAST of mRNA_Ecto-sp13_S_contig8535.19936.1 vs. uniprot
Match: D7FHR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHR4_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 2.640e-28
Identity = 60/65 (92.31%), Postives = 61/65 (93.85%), Query Frame = 0

Query:    1 GLFLAAYSGSLADVKSTLKNNALSVDVADPIKGSTALLWASAGGSLEVVEWLVKQAGANAGHRNK 65
            GLFLAAYSG+LADVKSTLKNNALS DVADP KGSTALLWAS GGSLEVVEWLVKQ GANAGHRNK
Sbjct:   13 GLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQGGANAGHRNK 77

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8535.19936.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8535.19936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5K3N5_9PHAE	5.430e-223	75.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FHR2_ECTSI	8.750e-164	67.97	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FHR4_ECTSI	2.640e-28	92.31	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 66..96 e-value: 16.0 score: 14.4 coord: 32..62 e-value: 18.0 score: 14.3 coord: 101..138 e-value: 450.0 score: 7.6
IPR002110	Ankyrin repeat	PFAM	PF00023	Ank	coord: 102..135 e-value: 0.027 score: 14.9
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 2..98 e-value: 5.7E-10 score: 39.7
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 1..146 score: 17.741
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..162 e-value: 2.2E-24 score: 87.8
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 2..146
None	No IPR available	PANTHER	PTHR24178	FAMILY NOT NAMED	coord: 2..130

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8535	contig	Ecto-sp13_S_contig8535:2..6543 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8535.19936.1	mRNA_Ecto-sp13_S_contig8535.19936.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8535 2..6543 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8535.19936.1 ID=prot_Ecto-sp13_S_contig8535.19936.1|Name=mRNA_Ecto-sp13_S_contig8535.19936.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=743bp
GLFLAAYSGSLADVKSTLKNNALSVDVADPIKGSTALLWASAGGSLEVVE
WLVKQAGANAGHRNKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKP
SGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNAD
LSVEAPSLKPTAQAPAITKSLEDARSGGGVATPAAAAPAPGGAPAAETAA
AAPATAPETEANSAVASVPAAAAEAPAAAEAPADGAPAPQEAAGPMRLLP
KASAFPTSRPTTTVASARAAAKKMASPTSPRSPAGSPRSVAAATSPPAGN
AAPASPSGVASRPAALEEKAAAGASSSSSDAAKPDVAAAVAGPSSPSSPT
EQPVAPSSSPTATLSPGATAAAVPTASPSPKSAGSPRAAAAAAAASSGAS
KPQSPRAGGVLPRTGGTLPAPAAAAAPGSATGSSSSAAKIVATGVKPGLV
KQSSYLLRNASASSSSNAGRSGSGSVPSSNASAAATTIKPGLVKQSSYLL
RTGNNAATPAASNGNGVSTAAAAAATAASPKPAAAAAAPSRFQRTVPSSA
ATAATPAANSATAGSAAAVIGASRGPKASALAAAFENKARGGTTAAAKPT
PVAKPVAKPVAKPVAKPVAKPSPVLTQGGGAAAATATQQPQSPKKQTQVR
PTSPSKVTPESLLGKGTVMQRKKVYVAAAQKSGNGSPAPLIGKTRKEKDG
SFMDKFVSMFTISPQSSPSPSPPRCERWKIKNRPVSCQSESH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf