mRNA_Ecto-sp13_S_contig8499.19890.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8499.19890.1
Unique NamemRNA_Ecto-sp13_S_contig8499.19890.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: A0A6H5L6M4_9PHAE (EFG_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6M4_9PHAE)

HSP 1 Score: 737 bits (1903), Expect = 1.110e-255
Identity = 427/469 (91.04%), Postives = 431/469 (91.90%), Query Frame = 1 
Query:    1 QVRVLSEELGAARISPAGEGVDPLATGGQADPAVHNVSSTRPSSFRQDLLRALREASPDSGGTTGXXXXXXXXXAGWNEAGGEGFLARALAFGPRGVGTNLLARCAGRVEVRVAKAGDSIEETPTSKANNKSAGEAGRIGATATASEDTATAASEVRHASEEEASEALRLIENSVITGFQLATLAGPLAGEELHGLCFLLEKVEITADCLASGSSGRSPSTATAVVPXXXXXXXXXXXXDGRDSSSPVTPLEDGSGTGEGAGTSGEGSDDDGASVGKGSVRSGVAGERRGLQPQDQRRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVANIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTRNK 1407
            +VRVLSEELGAARIS AGEGVDPLATGGQADPAV N S TRPSSFRQDLL ALREASPDSGGTTGXXXXXXXXXAGWNEAGGEGFLARALAFGPRGVGTNLLARCAG VEVRVAKAG+SIEETPTSKAN K+AGEA          EDTATAASEVR ASEEEASEALRLIENSVITGFQLATLAGPLAGEELHGLCFLLEKVEITA+CL SGSS            XXXXXXXXXXXX G DSSSPVTPLEDGSGTGEG G SGEGSDDDGASVGKGSV SGVAGERRG QPQDQRRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSV NIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTRNK
Sbjct:  666 EVRVLSEELGAARISRAGEGVDPLATGGQADPAVLNASGTRPSSFRQDLLHALREASPDSGGTTGXXXXXXXXXAGWNEAGGEGFLARALAFGPRGVGTNLLARCAGGVEVRVAKAGNSIEETPTSKANTKNAGEAXXXXXXXXXXEDTATAASEVRQASEEEASEALRLIENSVITGFQLATLAGPLAGEELHGLCFLLEKVEITAECLTSGSSXXXXXXXXXXXXXXXXXXXXXXXXGG-DSSSPVTPLEDGSGTGEGVGASGEGSDDDGASVGKGSVESGVAGERRGPQPQDQRRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVTNIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTRNK 1133
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: A0A7S3XN80_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN80_HETAK)

HSP 1 Score: 242 bits (618), Expect = 1.250e-74
Identity = 123/175 (70.29%), Postives = 142/175 (81.14%), Query Frame = 1 
Query:  883 DQRRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVANIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTRNK 1407
            D   R+GPL+GQIIS ++ G RA++  CP RLVEAFY C LQCDQ QLGNMY VL+KRRGRV +ED+VEGT LF+L A LPVAESFGFA ELL +TSGA T PQLAFSHWEV++LDPFWRP TEEERED GEE  +  +N AR+Y+D VR RKGLAT+ +IVVAAEKQRTL R K
Sbjct:   37 DTASRFGPLSGQIISNIKDGVRAAVASCPARLVEAFYSCELQCDQQQLGNMYGVLAKRRGRVTEEDIVEGTALFVLGAALPVAESFGFAGELLTRTSGAATAPQLAFSHWEVIDLDPFWRPTTEEEREDLGEE--VRESNFARRYIDAVRARKGLATDKRIVVAAEKQRTLARKK 209
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: A0A7S3XMW0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMW0_HETAK)

HSP 1 Score: 242 bits (618), Expect = 1.240e-71
Identity = 123/175 (70.29%), Postives = 142/175 (81.14%), Query Frame = 1 
Query:  883 DQRRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVANIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTRNK 1407
            D   R+GPL+GQIIS ++ G RA++  CP RLVEAFY C LQCDQ QLGNMY VL+KRRGRV +ED+VEGT LF+L A LPVAESFGFA ELL +TSGA T PQLAFSHWEV++LDPFWRP TEEERED GEE  +  +N AR+Y+D VR RKGLAT+ +IVVAAEKQRTL R K
Sbjct:  264 DTASRFGPLSGQIISNIKDGVRAAVASCPARLVEAFYSCELQCDQQQLGNMYGVLAKRRGRVTEEDIVEGTALFVLGAALPVAESFGFAGELLTRTSGAATAPQLAFSHWEVIDLDPFWRPTTEEEREDLGEE--VRESNFARRYIDAVRARKGLATDKRIVVAAEKQRTLARKK 436
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: W7U9X5_9STRA (Elongation factor ef-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9X5_9STRA)

HSP 1 Score: 226 bits (576), Expect = 3.400e-61
Identity = 134/297 (45.12%), Postives = 178/297 (59.93%), Query Frame = 1 
Query:  511 IENSVITGFQLATLAGPLAGEELHGLCFLLEKVEITADCLASGSSGRSPSTATAVVPXXXXXXXXXXXXDGRDSSSPVTPLEDGSGTGEGAGTSGEGSDDDGASVGKGSVRSGVAGERRGLQPQDQRRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVANIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTR 1401
            +++S++ GFQ+AT +GPLA E+++G+ F +EK+E             SPS     +             DG +  S +  L                                    R  L+     R  G LTGQ++++ +  CRA+ L  PVRLVEAF+ C LQCD+LQLG +Y VLSKRRGRV+ ED++EGT LF++ ALLPVAESFGFA ELLKKTSGA T+PQL FSHWE ME++PFWRPQ E++RE+ GE    S  NIAR+Y+D  R+RKGL   +K+V+ AEKQRTL+R
Sbjct:  890 LQSSLLVGFQMATSSGPLAEEQMYGVGFAIEKLEFLL----------SPSDFKETL------------RDGNEERSCLPRLS-----------------------------------REDLEAWLSSR-LGSLTGQVMTLCKTACRAAFLSSPVRLVEAFFECDLQCDRLQLGRLYGVLSKRRGRVIREDILEGTDLFMIKALLPVAESFGFATELLKKTSGAATSPQLFFSHWERMEVNPFWRPQNEDDREEFGET-FGSDFNIARRYIDETRRRKGLQIGEKLVLYAEKQRTLSR 1127
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: A0A7S2RBI4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBI4_9STRA)

HSP 1 Score: 199 bits (507), Expect = 9.640e-59
Identity = 103/162 (63.58%), Postives = 125/162 (77.16%), Query Frame = 1 
Query:  940 GCRASMLCCP-VRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSV-----ANIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTRNK 1407
            G RA +L  P  RLVE F +C LQC+Q QLGN+YA+LSKRRG VVDED++EGT+LFL+TA +PV ES GF+ ELL KTSGA T PQL+FSHWE M +DPFWRP TE+ERE+ GE  +++       NIAR+ +D VR+RKGL   +KIV AAEKQRTLTRNK
Sbjct:    1 GARACLLSSPSARLVEGFVQCDLQCEQDQLGNLYALLSKRRGTVVDEDIIEGTELFLITAQIPVVESIGFSQELLDKTSGAATAPQLSFSHWESMSVDPFWRPTTEDEREEMGE-SYMTYETDRETNIARRNIDAVRRRKGLMVEEKIVAAAEKQRTLTRNK 161
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: A0A7S2AZY7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZY7_9STRA)

HSP 1 Score: 197 bits (500), Expect = 9.600e-58
Identity = 96/148 (64.86%), Postives = 119/148 (80.41%), Query Frame = 1 
Query:  970 VRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHL----SVANIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTR 1401
            +RL+E FYRC LQCDQ QLGN+YA+LSKRRG V+D+DLVEGT+LFL+TALLPV ES GF+ ELL +TSGA TTPQL+FSHW+ +E+ PFWRP TE+ERE+ GE         + N+AR+++D VR+RKGL   +KIVV AEKQRTL R
Sbjct:    9 LRLIEGFYRCDLQCDQAQLGNLYALLSKRRGIVLDDDLVEGTELFLITALLPVVESLGFSSELLGRTSGAATTPQLSFSHWDAIEVSPFWRPTTEDEREEMGESYSTYDQDRLTNLARRHIDNVRRRKGLLVEEKIVVDAEKQRTLGR 156
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: A0A7S2G103_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G103_9STRA)

HSP 1 Score: 196 bits (497), Expect = 9.100e-57
Identity = 100/167 (59.88%), Postives = 126/167 (75.45%), Query Frame = 1 
Query:  916 QIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVAN---IARQYLDGVRKRKGLATNDKIVVAAEKQRTLTRNK 1407
            ++   +++ CRA++L   VR+VE   RC LQC+  QLGN+YA L+K RG V+ ED+VEGT+LF +TALLPV E+ GF+  LLKKTSGA TTPQL+ SHWE +E DPFWRP T EERE+EGEE H  V N   +AR+ +D VR+RKGL   +KIVVAAEKQRTL+R K
Sbjct:   31 ELSKAMKLACRAALLSGDVRVVEKKLRCDLQCNSSQLGNLYATLAKMRGEVIKEDIVEGTELFSITALLPVTEAQGFSAALLKKTSGAATTPQLSLSHWETLERDPFWRPTTAEEREEEGEE-HTIVGNDHNVARKLIDAVRRRKGLPVEEKIVVAAEKQRTLSRAK 196
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: UPI0004F0CB98 (elongation factor Tu GTP-binding domain-containing protein 1-like n=2 Tax=Neognathae TaxID=8825 RepID=UPI0004F0CB98)

HSP 1 Score: 197 bits (500), Expect = 1.570e-53
Identity = 129/306 (42.16%), Postives = 176/306 (57.52%), Query Frame = 1 
Query:  505 RLIENSVITGFQLATLAGPLAGEELHGLCFLLEKVEIT--ADCLASGSSGRSPSTATAVVPXXXXXXXXXXXXDGRDSSSPVTPLEDGSGTGEGAGTSGEGSDDDGASVGKGSVRSGVAGERRGLQPQDQ---RRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVANIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTRNK 1407
            R  +NS+++GFQLATL+GP+  E L G+CF +EK EI    D L++ S       A                    D  +    L   S TGE A ++ E  D         S +SG+    +  +P+ +      YGP +GQ+I+ ++  CR ++   P RL+ A Y C +      LG +YAVLSKR GRV+ E++ EGT +F++ A+LPVAESFGFADE+ K+TSG  + PQL FSHWE++  DPFW P TEEE    GE+      N AR+Y++ VRKRKGL   +KIV  AEKQRTL+RNK
Sbjct:  243 RDFDNSIVSGFQLATLSGPMCEEPLMGVCFTVEKWEINKVGDVLSTRSQDSGEHDAV------------------EDQQNEDNALASSS-TGE-AHSANEHQD---------SSQSGMGSPEKTSKPKGEVLLADCYGPFSGQLIATMKEACRYALQAKPQRLMAAMYTCEIMATAEVLGRVYAVLSKREGRVLHEEMKEGTDVFIIKAVLPVAESFGFADEIRKRTSGLAS-PQLVFSHWEIISSDPFWVPTTEEEYLHFGEKADSE--NQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSRNK 516
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: K3WNV1_GLOUD (Tr-type G domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNV1_GLOUD)

HSP 1 Score: 202 bits (514), Expect = 5.200e-53
Identity = 125/300 (41.67%), Postives = 166/300 (55.33%), Query Frame = 1 
Query:  496 EALRLIENSVITGFQLATLAGPLAGEELHGLCFLLEKVEITADCLASGSSGRSPSTATAVVPXXXXXXXXXXXXDGRDSSSPVTPLEDGSGTGEGAGTSGEGSDDDGASVGKGSVRSGVAGERRGLQPQDQRRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVANIARQYLDGVRKRKGLATNDKIVVAAEKQRTL 1395
            E L  +ENS+ITGFQ+A+ AGPL  E + G+ F++E V                                      +DS                                        A E+   + ++   R+GPL+GQIIS++R  CR + +  PVRLVEA Y C++QC   QLG +Y+V+SKRRG +  E+L +G+ LF + A LPV ESFGFA +LL +TSGA + PQL FSHW VMELDPF++PQTEEERED GE   ++  N  R+Y++ VRKRKGLA ++KIVV AEKQRTL
Sbjct:  854 ETLSKLENSIITGFQMASAAGPLCDEPVWGVAFVIEDVVFNEK---------------------------------KDSDE--------------------------------------AAEK---EKEENESRFGPLSGQIISMMRTLCRIAFVKQPVRLVEAIYDCTVQCLAEQLGKLYSVISKRRGDIYSEELSDGSALFTVKASLPVIESFGFATDLLIQTSGAASNPQLIFSHWSVMELDPFFQPQTEEEREDFGE--RINEHNYVRKYIEAVRKRKGLARDEKIVVHAEKQRTL 1077
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BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Match: A0A225VS76_9STRA (Elongation factor Tu n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225VS76_9STRA)

HSP 1 Score: 202 bits (513), Expect = 6.460e-53
Identity = 118/302 (39.07%), Postives = 165/302 (54.64%), Query Frame = 1 
Query:  496 EALRLIENSVITGFQLATLAGPLAGEELHGLCFLLEKVEITADCLASGSSGRSPSTATAVVPXXXXXXXXXXXXDGRDSSSPVTPLEDGSGTGEGAGTSGEGSDDDGASVGKGSVRSGVAGERRGLQPQDQRRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVANIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTR 1401
            E +R +ENS++TGFQ+A+ AGPL  E + G+ F++E V    +    G   +S                                                                         + + + R+YGPL+GQ+IS++R  C  S +  PVRLVEA Y C++QC   QLG +Y+V+SKRRG +  E+L +GT LF + A LPV ESFGFA +LL +TSGA + PQL FSHW ++++DPF++PQTEEERED GE   +   N  R+Y++ VRKRKGL+ ++KIV+ AEKQRTL R
Sbjct:  820 EQIRKLENSIVTGFQMASSAGPLCDEPVWGVAFIIEDVVFHEN---KGDEDKSE------------------------------------------------------------------------EEKAEARKYGPLSGQVISIMRTTCLMSFVKQPVRLVEAIYECTVQCQAEQLGKLYSVISKRRGDIYSEELSDGTALFTVKAHLPVVESFGFATDLLIQTSGAASNPQLIFSHWSIIDMDPFFQPQTEEEREDYGE--RVYEHNYVRRYIEAVRKRKGLSRDEKIVIHAEKQRTLKR 1044
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8499.19890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6M4_9PHAE1.110e-25591.04EFG_C domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S3XN80_HETAK1.250e-7470.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3XMW0_HETAK1.240e-7170.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7U9X5_9STRA3.400e-6145.12Elongation factor ef-2 n=1 Tax=Nannochloropsis gad... [more]
A0A7S2RBI4_9STRA9.640e-5963.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2AZY7_9STRA9.600e-5864.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2G103_9STRA9.100e-5759.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI0004F0CB981.570e-5342.16elongation factor Tu GTP-binding domain-containing... [more]
K3WNV1_GLOUD5.200e-5341.67Tr-type G domain-containing protein n=1 Tax=Globis... [more]
A0A225VS76_9STRA6.460e-5339.07Elongation factor Tu n=3 Tax=Phytophthora TaxID=47... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8499contigEcto-sp13_S_contig8499:569..6503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score746.5
Seed ortholog evalue7.5e-213
Seed eggNOG ortholog2880.D7G3I9
Preferred nameEFTUD1
Model size1410
KEGG koko:K03234,ko:K14536
KEGG Pathwayko03008,ko04152,ko04921,map03008,map04152,map04921
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019222,GO:0019538,GO:0019637,GO:0019693,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042256,GO:0042278,GO:0042802,GO:0043021,GO:0043022,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045901,GO:0046039,GO:0046128,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0055086,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0072521,GO:0080090,GO:0097159,GO:0097367,GO:1901068,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1990145,GO:2000112
Exons9
EggNOG free text desc.GTPase activity
EggNOG OGsCOG0480@1,KOG0467@2759
Cds size1410
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03012,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8499.19890.1prot_Ecto-sp13_S_contig8499.19890.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8499 569..6503 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464119.4429455-CDS-Ecto-sp13_S_contig8499:568..7631681464119.4429455-CDS-Ecto-sp13_S_contig8499:568..763Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8499 569..763 -
1681464119.4537244-CDS-Ecto-sp13_S_contig8499:1443..15601681464119.4537244-CDS-Ecto-sp13_S_contig8499:1443..1560Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8499 1444..1560 -
1681464119.4629521-CDS-Ecto-sp13_S_contig8499:1989..20861681464119.4629521-CDS-Ecto-sp13_S_contig8499:1989..2086Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8499 1990..2086 -
1681464119.4721448-CDS-Ecto-sp13_S_contig8499:2556..26781681464119.4721448-CDS-Ecto-sp13_S_contig8499:2556..2678Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8499 2557..2678 -
1681464119.4817073-CDS-Ecto-sp13_S_contig8499:3129..34681681464119.4817073-CDS-Ecto-sp13_S_contig8499:3129..3468Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8499 3130..3468 -
1681464119.4918487-CDS-Ecto-sp13_S_contig8499:4551..46261681464119.4918487-CDS-Ecto-sp13_S_contig8499:4551..4626Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8499 4552..4626 -
1681464119.512281-CDS-Ecto-sp13_S_contig8499:5101..52551681464119.512281-CDS-Ecto-sp13_S_contig8499:5101..5255Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8499 5102..5255 -
1681464119.5253117-CDS-Ecto-sp13_S_contig8499:5772..59611681464119.5253117-CDS-Ecto-sp13_S_contig8499:5772..5961Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8499 5773..5961 -
1681464119.537639-CDS-Ecto-sp13_S_contig8499:6381..65031681464119.537639-CDS-Ecto-sp13_S_contig8499:6381..6503Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8499 6382..6503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8499.19890.1

>prot_Ecto-sp13_S_contig8499.19890.1 ID=prot_Ecto-sp13_S_contig8499.19890.1|Name=mRNA_Ecto-sp13_S_contig8499.19890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=470bp
QVRVLSEELGAARISPAGEGVDPLATGGQADPAVHNVSSTRPSSFRQDLL
RALREASPDSGGTTGGSSAVGGGGAGWNEAGGEGFLARALAFGPRGVGTN
LLARCAGRVEVRVAKAGDSIEETPTSKANNKSAGEAGRIGATATASEDTA
TAASEVRHASEEEASEALRLIENSVITGFQLATLAGPLAGEELHGLCFLL
EKVEITADCLASGSSGRSPSTATAVVPPPPPPGDPGNPEDGRDSSSPVTP
LEDGSGTGEGAGTSGEGSDDDGASVGKGSVRSGVAGERRGLQPQDQRRRY
GPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLS
KRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLA
FSHWEVMELDPFWRPQTEEEREDEGEEGHLSVANIARQYLDGVRKRKGLA
TNDKIVVAAEKQRTLTRNK*
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mRNA from alignment at Ecto-sp13_S_contig8499:569..6503-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8499.19890.1 ID=mRNA_Ecto-sp13_S_contig8499.19890.1|Name=mRNA_Ecto-sp13_S_contig8499.19890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5935bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8499:569..6503- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGCGTGTGCTTTCGGAAGAGCTCGGAGCCGCCAGGATATCTCCGGC
CGGCGAAGGCGTTGACCCTTTGGCGACAGGGGGACAAGCGGACCCGGCCG
TTCACAACGTCTCCAGTACTCGGTGCTTTTGTCGCGTCTCTCGATTTGCA
TCTTCTTGGCATTCGCATGTGGCTTGGGATCGCTCCTCTGCTGTCGGTGT
TGGTTTTGTCGGTGTTCGTGCTGTTGTTTGTTGTTGTTGTTGTTGTCGTT
GCTGCTGCTGCTGCTGCTGCTGCTGTTGCCTTGCTTCTGCTGCTGCTGCT
GCTGCTGCTGCTATTGTTGTTGTTGCTGCTGCTGCTCCTGCTACTGCTGC
TATTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTGCTGCTT
CTGCTGCTTCTGCTGCTGCTGCTGCTGTTTTGGTTGCTGTGCCCCCCCCC
CCCCCCCCCCCGTGGCTCTCTCTCTCTCTTCTCTTGACACCGCTTCCATG
TTCTCGTTCGCTGTACCCCTCTACAAACTGTTTCGCTCCAAGGCCGTCCT
CCTTCCGGCAAGATCTCCTCCGGGCGCTCAGGGAGGCGTCGCCCGACAGC
GGGGGTACTACCGGCGGCAGTAGCGCAGTAGGTGGCGGGGGTGCCGGGTG
GAACGAAGCGGGGGGGGAGGGCTTCCTTGCAAGGGCGTTGGCTTTCGGTC
CGCGAGGCGTGGGGACCAACCTGTTGGCCAGGTGCGGCGACACCGTTGAG
CGTGTGGTTTCGTGTTCCGTCGGTGTTTGTTGAAGGGTGTTTCGTTATTG
CGCTGCTGTTTTGGGCGTTCTGTCTGCCTCGTAAGCGCTCGTTCTCGCTA
CCAAGCGCGCGCGTTCGTTGTAGTTTTTTTCGTGGTTCTTGAAGCCTTCC
GCCTCTGCCTTAAATTTTTGTTGCTTCACGATCATGAACACTGTGCCCAC
CCGGCACTCGCGTCATACACTACCGGAGAGATCGGAACTATAAAGCATAG
CTAGGTTCGCGTGTTTCCCATGCGCAACCAAGTTTTTTTTGCGACTTCCG
GTTGCCAAATTAATCGTACACTTTCCGGCGTCACATACGTTATTGTTAAC
TTAACGTTCCGATGTGTTCGAAACACCCTCGACCTGAACCAAGTCTTGCA
AGCGTACACGTGCGTGCACAAGATGCACGTTCCCAAGCTTCGATTTTAAC
TCAACTCGCTGGGCGGGGGGCGCGCGATGTATTTTTTTTGTGCTGCAGAT
GCGCTGGGCGGGTGGAGGTCAGGGTAGCCAAGGCCGGCGACAGCATCGAG
GAAACCCCCACAAGTAAGGCCAACAACAAGAGCGCTGGGGAGGCTGGCAG
GATCGGTGCTACTGCTACCGCTTCGGAGGACACGGCCACGGCGGCAAGCG
AGGTGAAACGCATGTCCCATGTTGACCTGGAATGTTCATACGGCAGGGGT
AAAAACGCATGGCAGAGCCAGGATTAGCCAAGCACAGCCAAGCCAAAATC
AGATGAGGTGTTTGCTTTTTTCTTGCTGCCACTTTTTTTTTTGTATGTAT
TGCCCTCACGAGTTTCATTGCCCTATCGCAGAACGGGTGTTCAGCGGTCG
TGAAGAATGTTGGGAAGGGCTTCCCAAAGGCTGATATCTTGTTGATAGTT
CAGATTGGACCGAAAGCGATGCGTAGCCAGAAGGGGTTGAGGCACGCAGG
CTACGTGTATATTCATACGCATGGATAGGTGAGAAATCGTCGAAATCGCA
GGCCGCCTTGAAGAAACTGCGAGGATTTCCGAGGTAGTTTTGCCCTGCTC
GCCGTCGTTTTTCAACTCTTTCTCTAAACACGCATCTCCCGCGTGCTTGC
CTTCGGTGACGTATGATACGTTTGCAGGTTCGACACGCAAGCGAAGAAGA
AGCGTCCGAGGCTCTAAGGCTCATCGAGAACAGCGTCATCACAGGATTTC
AGGTGCCAGTCTCTTTTGCCACGCGTTATTGATACGGTCGGAACAAACCT
CTCATGAGAACACAGCATAATCCTTTCTCCGTAGCAGCTGAAGCAATACG
AGGGGGACGAGCACCAGACCCCGCCTTGGCACAGCAAACGCAAGGACGAC
GACCAGCTTCTGGTGTATCCTTGTGAAACGTACATAGCCTGGGCCGGCGA
ACACCCGGCTTATCGCTCCGTTCAGGCATGCGAGATAACTGGTCTAACGA
CTACGGCATGCGTTTACATGATTACCCCCGCCCAACAACGTAACCTGGGC
CGACGAAAACCCGGCAACCATGTCGCTCCGTCACGGCATCGTAGGGATGC
GAGGCGATGGTCTAACGATTACGGCATACGTTTACATGACTCCACACCCA
CACCCGTCGGGGAAGCGGCGGTGGGGGGGAAGAAACGGCGACCGGGCACT
GCTGTAGAAGCGAGTAGGGCGGCCAAGGCAGCACCTGTGACGAACTACGC
ACCCGGCTGATGTTGTTGCGCCCTGTTCCCCTCCCTGCTGTACGCTATAC
TCCTGTGTGTCCTTTGTATTGCCTTCGGCCTCTGTGCTGAGCTTCTTTTT
TCCTGTCCTCCCTGCCTACTCTGCCTTGTTGGGGACCTTGATCTCCCTTG
ATCTCCCTTTTGCTTACAAATTTCTGGCTGTCTGCCCATCTGCCGCCTCT
TTGCTCTGTTGCCTCCACTACTCCATGCCCTGGTGCGTAGTGCCTGGTGC
TGGAACGTATCCCTTTGATTTTTTAGGCGAGTGTGGGAAGCGTCCTCCTT
CTAATTTTTTGTTTTATTTTGTTTTATTTTGATCGGTTTCCTAGGTCTCT
TTTCTCGACCGGACGGTGCGGTAGCTGTTATTTTCTTTCTATCATTTTGT
TTTCTTTTTCCGAGTGGTTTGTGCCCTATTTTTGTTTTGTTTCCCCGCGG
CGTCGTATGTGCCGGGTTTTGAGACCACGGGCTCTCCATTTTTATGGACT
ATTAAGAGCTAATGTGAGAAACAACAACAAATAAAATAAAAACCCGGCAC
CCCTCAACAACACTATTAACCTCGCATTTTTGCAGCTGGCTACCCTGGCG
GGGCCCCTGGCCGGGGAAGAGCTGCACGGGCTCTGCTTCCTGCTGGAGAA
GGTAGAAATCACGGCGGACTGCCTCGCGAGCGGCAGCAGCGGTAGGAGCC
CCTCAACAGCCACCGCCGTCGTACCGCCGCCACCGCCTCCTGGAGACCCT
GGAAACCCCGAGGATGGCCGCGATTCGTCATCCCCAGTGACGCCCCTCGA
GGACGGTAGTGGGACCGGGGAGGGCGCGGGGACAAGCGGGGAGGGCAGCG
ACGATGACGGCGCAAGCGTCGGCAAAGGGAGCGTGAGGAGCGGTGTCGCG
GGGGAAAGACGGGGACTGCAGCCGGTGGGTGGCTTGGTGTGGAGGAATAT
GCGTGGGTGCGCGCTGTCGTCGTTTCTGATATGTTTCTGTCGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTTACCACTGTCGCGT
GGTTTGGGGTCTCTCAGCGCATTGTTGTTTGGGAGCACGTGTCGACGGTG
CCGTCTGCCCACCTTCAAAGACAAAGTTTTGTGTGTCGCCCGTATCCTGC
ACCCCGCGTGTGCTGCTTTCGGCACCGTGTGCACGTGATACCCTCCTTGC
CAACATCCACACCCTGCCTTGCCGACGCATGACCGTGGGTCACTTCTTGC
TTGGTGTTCTCACATGCGGTGCCCCCCGATACGGGCACCCCTGACGTCAC
ACTGATCGCTATTTCATGCCCCCCCCCCCGGCATCACAATGCCCCCGGAT
GTCGCGCCCCCCCCCCCCGCTGCAGCAGGACCAACGGAGACGGTACGGGC
CGTTGACGGGGCAGATAATTTCCGTCGTGCGCATGGGGTGCAGGGCTTCT
ATGCTTTGCTGCCCGGTGCGACTAGTCGAGGCGTTCTACCGCTGCAGGTG
ACCAGTGATGAACATTGTCGAAGGAGGGTACGAATGTCTATCTACATGGG
TGTGGAGTGCCACCTATCTATCCGGCTTTTGAAAAAAGTCGCAAATGCGT
GATTCGTACCTCGCATGTCTTTGTTGAACGAGTTGTTCCGACGATACCTG
TGGCCCATCGTGCTGAGGGCACCGCGCTCATGTTCAAAAATATACCCCAC
GGTGCATGTAGGCCCTTCGCGTTCGTTGGTATCTAATCATGTCGCTCGTG
ATAAGGCGGAGGGCAGAGGGGGGGGGGACTAATGCCGAACAGGATAAGGC
CCACTCCAACGGTTCCTGTAAACCGAAAAGGTTAGTTTGTGTACCTGAGA
GATATTTACACACAAACAGAAGTTCACCTTGGCGTACATTGAGGACGATT
CCAACACTCGGGAATATTTTTCCGGGGCGGCTTGCCGTGCGTGCTGTTGT
TCCGAACTAACCGGCAGTCTCCAGTGTGATCAGCTGCAGCTGGGCAACAT
GTACGCGGTACTCTCGAAGAGGCGGGGGAGAGTGGTGGACGAAGACCTTG
TGGAAGGCACACAGGTAGTTTCGTTGTTTTTTCATTTGTTGGTGTTGCCG
TTATTGGATATTGGTTGTTGTTGTTGTTTTTCTTGTTGTTGATGTGTGTG
TTGTTCTTGTTGTTGCTGTTGGTGGGTGTTGTGTTTTCGTCCAACAGTAC
AAACGCCTCGGTAGTGCAGCGTTGCTGCTCAATAGTACGAGCTGCGACTC
CTGTACCCACGCTCCCTTCTTGCTAAGAAACTGGTTGTTGATGCTCTCTT
GTTCCTAAAAACTGGTTGTTGCTGTCGCCATCGGTCGCTGTTGTTTTTGC
TTTAAAGCTGTTCGCCTAAACGCTACGGTATGCGGCAGGCTTGTCACTCC
TGCTACAGGCCATTCCACGATTTTTTTTTCTCGCTCACCGGATTTCTCTC
GGCGGCGTGTCTCTCTCTGGTATTTTCTCCCTCTCCCTCTCAGTTGTTTT
TGTTGACCGCGCTGCTGCCAGTGGCGGAATCGTTCGGGTTCGCCGACGAG
CTGCTCAAGAAGACATCGGGAGCAGGCACTACTCCTCAGCTGGCCTTCTC
TCATTGGGAGGTAACGACGTTAGCCATACCGTGCCAGACCACGGCATCTC
TCTATCCATTGCTCGAACGATATGAAGCAGTGGTGAAAAAACAAACGGAG
GCGGCTCTACGCCAGAGCTCGGCCATCTCTACGTTTCGTAGACTCTTTGC
ATCCTCTGGCCGGGAGTGTAGCCGCCGGGGCTTGATTGCTCTCGCAACAC
GCGCGTGTGGTGGGAGGTGCCCCCATTCTTGTCGAAACGCTTTTGGCCAA
ACCAAACGTACGTGTGTCTTAGTAGTGATTCGATTAAGCACTTGATGGCG
TGGCACGTGAATCTAGGCCCGGCCCTCGTTTGTGTTTCAGTGTCTAACGT
CTAGGCGCATCTTTCGGCGCGGTGATCGCCATAATCCAAGTTGTCCGTCG
ATAAGACGGTGCTTGGACAGTACTGTTGAGGCGAAGAGACTCAGCACCCC
CAGTCCCCTCGATTTTGCGTCCCCCCGCCCGCGCTTCGCGGTTGGTGATG
TGCTGAACTGGTTCGGTGAAAACCCGGCGTGCTCCGTCCTGTAGGGATGC
GAGGACAATGATCTAACGATTACGGCATGCGCTGCTATGAGTGCCCCCGC
CCCCGGCCGGTCTGACTTTTTGCCGAGTATGCCAAACGTCAAAATGTATC
CCGAAACGTTTTTCGTGCAATGCCTCTGCCGCAACCGCAGGTTATGGAGC
TGGACCCTTTCTGGCGGCCTCAGACGGAAGAGGAGAGAGAGGACGAGGGG
GAAGAGGGCCACCTGAGCGTGGCCAACATAGCCAGGCAGTACCTCGATGG
AGTTAGAAAACGGAAGGGGCTTGCCACGAACGACAAGATTGTGGTCGCCG
CGGAGAAGCAGCGGACACTGACGAGAAACAAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8499:569..6503-

>mRNA_Ecto-sp13_S_contig8499.19890.1 ID=mRNA_Ecto-sp13_S_contig8499.19890.1|Name=mRNA_Ecto-sp13_S_contig8499.19890.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8499:569..6503- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTGCGTGTGCTTTCGGAAGAGCTCGGAGCCGCCAGGATATCTCCGGC
CGGCGAAGGCGTTGACCCTTTGGCGACAGGGGGACAAGCGGACCCGGCCG
TTCACAACGTCTCCAGTACTCGGCCGTCCTCCTTCCGGCAAGATCTCCTC
CGGGCGCTCAGGGAGGCGTCGCCCGACAGCGGGGGTACTACCGGCGGCAG
TAGCGCAGTAGGTGGCGGGGGTGCCGGGTGGAACGAAGCGGGGGGGGAGG
GCTTCCTTGCAAGGGCGTTGGCTTTCGGTCCGCGAGGCGTGGGGACCAAC
CTGTTGGCCAGATGCGCTGGGCGGGTGGAGGTCAGGGTAGCCAAGGCCGG
CGACAGCATCGAGGAAACCCCCACAAGTAAGGCCAACAACAAGAGCGCTG
GGGAGGCTGGCAGGATCGGTGCTACTGCTACCGCTTCGGAGGACACGGCC
ACGGCGGCAAGCGAGGTTCGACACGCAAGCGAAGAAGAAGCGTCCGAGGC
TCTAAGGCTCATCGAGAACAGCGTCATCACAGGATTTCAGCTGGCTACCC
TGGCGGGGCCCCTGGCCGGGGAAGAGCTGCACGGGCTCTGCTTCCTGCTG
GAGAAGGTAGAAATCACGGCGGACTGCCTCGCGAGCGGCAGCAGCGGTAG
GAGCCCCTCAACAGCCACCGCCGTCGTACCGCCGCCACCGCCTCCTGGAG
ACCCTGGAAACCCCGAGGATGGCCGCGATTCGTCATCCCCAGTGACGCCC
CTCGAGGACGGTAGTGGGACCGGGGAGGGCGCGGGGACAAGCGGGGAGGG
CAGCGACGATGACGGCGCAAGCGTCGGCAAAGGGAGCGTGAGGAGCGGTG
TCGCGGGGGAAAGACGGGGACTGCAGCCGCAGGACCAACGGAGACGGTAC
GGGCCGTTGACGGGGCAGATAATTTCCGTCGTGCGCATGGGGTGCAGGGC
TTCTATGCTTTGCTGCCCGGTGCGACTAGTCGAGGCGTTCTACCGCTGCA
GTCTCCAGTGTGATCAGCTGCAGCTGGGCAACATGTACGCGGTACTCTCG
AAGAGGCGGGGGAGAGTGGTGGACGAAGACCTTGTGGAAGGCACACAGTT
GTTTTTGTTGACCGCGCTGCTGCCAGTGGCGGAATCGTTCGGGTTCGCCG
ACGAGCTGCTCAAGAAGACATCGGGAGCAGGCACTACTCCTCAGCTGGCC
TTCTCTCATTGGGAGGTTATGGAGCTGGACCCTTTCTGGCGGCCTCAGAC
GGAAGAGGAGAGAGAGGACGAGGGGGAAGAGGGCCACCTGAGCGTGGCCA
ACATAGCCAGGCAGTACCTCGATGGAGTTAGAAAACGGAAGGGGCTTGCC
ACGAACGACAAGATTGTGGTCGCCGCGGAGAAGCAGCGGACACTGACGAG
AAACAAGTGA
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