prot_Ecto-sp13_S_contig84192.19794.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig84192.19794.1
Unique Nameprot_Ecto-sp13_S_contig84192.19794.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length127
Homology
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: A0A6H5JZG8_9PHAE (Hflx-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZG8_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 2.830e-65
Identity = 123/157 (78.34%), Postives = 126/157 (80.25%), Query Frame = 0
Query:    1 MLKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRH-----------RKG--------------------MVQARNRVFDTLDPTVRSLTLPSRVR 126
            MLKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQR+LLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRH           R+G                    MVQARNRVFDTLDPTVRS+TLPSRVR
Sbjct:  137 MLKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRQLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHNTRGVGGGGGNREGKGSERGRRFDGAXXXXXXXXMVQARNRVFDTLDPTVRSVTLPSRVR 293          
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: A0A1V5MDB5_9FIRM (GTPase HflX n=1 Tax=Firmicutes bacterium ADurb.Bin419 TaxID=1852892 RepID=A0A1V5MDB5_9FIRM)

HSP 1 Score: 99.0 bits (245), Expect = 2.310e-22
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0
Query:    2 LKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKGMVQARNRVFDTLDPTVRSLTLPS 123
            LKY+ + L+ G G+   R GGGIGT G  GEK ++  RR +R R   +  +L +VE+RRGF R SRD+     +ALVGYTN GKS+LMN L      K  V A +++F TLDPT RSL LPS
Sbjct:   34 LKYRISRLI-GLGNQLSRLGGGIGTRG-PGEKKLEVDRRHIRRRINYLEAELSEVEKRRGFMRKSRDKNFLPVIALVGYTNAGKSTLMNTLC-----KSDVFAEDKLFATLDPTARSLKLPS 148          
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: W4VCL7_9FIRM (GTPase HflX n=1 Tax=Acetivibrio thermocellus JCM 21531 TaxID=1294263 RepID=W4VCL7_9FIRM)

HSP 1 Score: 96.3 bits (238), Expect = 1.500e-21
Identity = 60/121 (49.59%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    2 LKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKGMVQARNRVFDTLDPTVRSLTLP 122
            LKY+ + LV G G+   R GGGIGT G  GEK ++  RR ++ R + +  QLKDVE+RR   R SR R    ++ALVGYTN GKS+LMN+L      +  V A N++F TLDPT RS +LP
Sbjct:  151 LKYRVSRLV-GLGTQLSRLGGGIGTRG-PGEKKLEVDRRHIKKRISFLESQLKDVEKRRNSLRESRTRNAIPTIALVGYTNAGKSTLMNRLC-----ESDVLAENKLFATLDPTTRSFSLP 264          
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: A0A7X8JZ49_9CLOT (GTPase HflX n=1 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7X8JZ49_9CLOT)

HSP 1 Score: 98.6 bits (244), Expect = 1.740e-21
Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    2 LKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKGMVQARNRVFDTLDPTVRSLTLPS 123
            LKY+ + L+ G G+   R GGGIGT G  GEK ++  RR +R R   +  +L +VE+RRGF+R SRD+     +ALVGYTN GKS+LMN L      K  V A +++F TLDPT RSL LP+
Sbjct:  290 LKYRISRLI-GLGNQLSRLGGGIGTRG-PGEKKLEVDRRHIRRRINHLEEELSEVEKRRGFKRKSRDKNSLPVIALVGYTNAGKSTLMNALC-----KADVFAEDKLFATLDPTARSLMLPN 404          
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: UPI0001E2D92D (GTPase HflX n=1 Tax=Acetivibrio cellulolyticus TaxID=35830 RepID=UPI0001E2D92D)

HSP 1 Score: 98.6 bits (244), Expect = 1.800e-21
Identity = 61/122 (50.00%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    2 LKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKGMVQARNRVFDTLDPTVRSLTLPS 123
            LKY+ + L+ G G+   R GGGIGT G  GEK ++  RR +R R + +  +L +VE+RRGF R SRDR     VALVGYTN GKS+LMN L      K  V A +++F TLDPT R+L LP+
Sbjct:  332 LKYRVSRLI-GLGNQLSRLGGGIGTRG-PGEKKLEVDRRHIRRRISYLESELSEVEKRRGFMRKSRDRDSLPVVALVGYTNAGKSTLMNTLC-----KSDVLAEDKLFATLDPTARNLKLPN 446          
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: A0A2S6R5J5_9PROT (GTPase HflX (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin1 TaxID=2013103 RepID=A0A2S6R5J5_9PROT)

HSP 1 Score: 96.7 bits (239), Expect = 2.910e-21
Identity = 60/125 (48.00%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    2 LKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKGMVQARNRVFDTLDPTVRSLTLPSRVR 126
            L Y+ + LV+ S +  +RQ GG+G +GG GE  I+  RR +R R A + R LK+V R RG  R++R R     VALVGYTN GKS+L N+L         V  +++VF TLDPT+R LTLPSR R
Sbjct:   91 LNYQRSRLVR-SWTHLERQRGGVGFLGGPGETQIEADRRQIRERIARLKRDLKNVVRTRGLHRAARQRVPYPVVALVGYTNAGKSTLFNRLT-----GADVDVKDQVFATLDPTMRGLTLPSRRR 209          
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: A0A6G7ZJQ7_9SPHN (GTPase HflX n=1 Tax=Sphingomonas sp. HDW15A TaxID=2714942 RepID=A0A6G7ZJQ7_9SPHN)

HSP 1 Score: 95.9 bits (237), Expect = 9.760e-21
Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    2 LKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKGMVQARNRVFDTLDPTVRSLTLP 122
            L Y+A  LV+ S +  +RQ GG G +GG GE  I+  RRL+RNR A++ R+L+DV R RG  R  R R     +ALVGYTN GKS+L N++      +  V A + +F TLDPT+R + LP
Sbjct:  140 LDYQAGRLVR-SWTHLERQRGGFGFLGGPGETQIEADRRLIRNRMAKIRRELEDVRRTRGLHRERRQRAPWPVIALVGYTNAGKSTLFNRMT-----RANVMAEDLLFATLDPTMREIRLP 254          
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: A0A2S6R5U1_9PROT (GTPase HflX n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin2 TaxID=2013104 RepID=A0A2S6R5U1_9PROT)

HSP 1 Score: 95.9 bits (237), Expect = 1.000e-20
Identity = 60/123 (48.78%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    2 LKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKGMVQARNRVFDTLDPTVRSLTLPSR 124
            L Y+ + LV+ S +  +RQ GG G +GG GE  I+  RR LR+R A + R+L DV R R   R++R R     VALVGYTN GKS+L N+L         V AR++VF TLDPT+R+L LPSR
Sbjct:  133 LSYQRSRLVR-SWTHLERQRGGFGFLGGPGETQIEADRRQLRDRIARLKRELNDVARTRSLHRAARQRVPYPVVALVGYTNAGKSTLFNRLTGAE-----VDARDQVFATLDPTMRTLKLPSR 249          
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: A0A373AC07_9FIRM (GTPase HflX n=3 Tax=Eubacteriales TaxID=186802 RepID=A0A373AC07_9FIRM)

HSP 1 Score: 95.5 bits (236), Expect = 1.300e-20
Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    2 LKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKGMVQARNRVFDTLDPTVRSLTLPS 123
            LKY+ A LV G GS   R GGGIGT G  GEK ++  RRL+++R A+++R+L +V+R R   RS R R+  A +A+VGYTN GKS+L+N L         V   +++F TLDPT R L LPS
Sbjct:  133 LKYRQARLV-GLGSSLSRLGGGIGTRG-PGEKKLEMDRRLIKSRIAQLNRELDEVKRHREVTRSRRSRKSTAVIAIVGYTNAGKSTLLNTLT-----GAQVLEEDKLFATLDPTTRILELPS 247          
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Match: A0A535WLS3_9CHLR (GTPase HflX n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535WLS3_9CHLR)

HSP 1 Score: 95.1 bits (235), Expect = 1.570e-20
Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 0
Query:   17 FDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKGMVQARNRVFDTLDPTVRSLTLPS 123
            + RQGGGIGT GG GE+ I+ +RR +R R  ++ +++ DV+R+R  QR+ R R    +VA+VGYTN GKS+L+N L         V+A NR+F TLDPT R L LPS
Sbjct:  125 YHRQGGGIGTRGGPGEQQIEVERRRIRRRLKDLEKEIADVQRQRQQQRAGRHRSELQTVAIVGYTNAGKSTLLNGLT-----NAGVRAENRLFATLDPTTRRLRLPS 226          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig84192.19794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZG8_9PHAE2.830e-6578.34Hflx-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A1V5MDB5_9FIRM2.310e-2250.00GTPase HflX n=1 Tax=Firmicutes bacterium ADurb.Bin... [more]
W4VCL7_9FIRM1.500e-2149.59GTPase HflX n=1 Tax=Acetivibrio thermocellus JCM 2... [more]
A0A7X8JZ49_9CLOT1.740e-2149.18GTPase HflX n=1 Tax=Clostridiaceae bacterium TaxID... [more]
UPI0001E2D92D1.800e-2150.00GTPase HflX n=1 Tax=Acetivibrio cellulolyticus Tax... [more]
A0A2S6R5J5_9PROT2.910e-2148.00GTPase HflX (Fragment) n=1 Tax=Alphaproteobacteria... [more]
A0A6G7ZJQ7_9SPHN9.760e-2146.28GTPase HflX n=1 Tax=Sphingomonas sp. HDW15A TaxID=... [more]
A0A2S6R5U1_9PROT1.000e-2048.78GTPase HflX n=1 Tax=Alphaproteobacteria bacterium ... [more]
A0A373AC07_9FIRM1.300e-2048.36GTPase HflX n=3 Tax=Eubacteriales TaxID=186802 Rep... [more]
A0A535WLS3_9CHLR1.570e-2049.53GTPase HflX n=1 Tax=Chloroflexi bacterium TaxID=20... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availableGENE3D3.40.50.300coord: 51..126
e-value: 6.5E-11
score: 44.2
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 75..120
e-value: 4.2E-8
score: 33.3
IPR032305GTP-binding protein, middle domainPFAMPF16360GTP-bdg_Mcoord: 2..67
e-value: 1.5E-14
score: 54.3
IPR016496GTPase HflXPANTHERPTHR10229GTP-BINDING PROTEIN HFLXcoord: 2..124
IPR030394HflX-type guanine nucleotide-binding (G) domainPROSITEPS51705G_HFLXcoord: 73..126
score: 18.886
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 69..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig84192contigEcto-sp13_S_contig84192:46..522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig84192.19794.1mRNA_Ecto-sp13_S_contig84192.19794.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig84192 46..537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig84192.19794.1 ID=prot_Ecto-sp13_S_contig84192.19794.1|Name=mRNA_Ecto-sp13_S_contig84192.19794.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=127bp
MLKYKAAHLVKGSGSGFDRQGGGIGTMGGSGEKAIDTQRRLLRNRTAEVH
RQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHRKG
MVQARNRVFDTLDPTVRSLTLPSRVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR032305GTP-bd_M
IPR016496GTPase_HflX
IPR030394G_HFLX_dom
IPR027417P-loop_NTPase