mRNA_Ecto-sp13_S_contig12387.1977.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: D7FZG0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZG0_ECTSI) HSP 1 Score: 483 bits (1244), Expect = 6.550e-168 Identity = 242/263 (92.02%), Postives = 245/263 (93.16%), Query Frame = 1
Query: 1 QENSEAERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENLKGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGVASGDAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
QE+SEAERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTG S A + I NLKGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGND DDK+TRQLINELVS EQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFG SGD VFEAG EDGSMALKQEFMHKFHNISRIMDCVGCEKCKV
Sbjct: 177 QEHSEAERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGLSHHQGAWMLERI--NNLKGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDEDDKMTRQLINELVSAEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGDVSGDVVFEAGHEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 437
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A835YS22_9STRA (Putative endoplasmic oxidoreductin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS22_9STRA) HSP 1 Score: 251 bits (642), Expect = 8.470e-77 Identity = 139/278 (50.00%), Postives = 181/278 (65.11%), Query Frame = 1
Query: 19 ERDFGKVDHSQSSPADDSFNPWSEAADAA-VWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWEN-LKGYQD--NACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEA-----GMVSVDNDMRRDD-----SVP--MCLKGFDEKGLFGVASG-----DAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
E++ G++D S S P D FNPW E A + VW+ Q+E + YVNL+LNPE+FTGYSGASA RVW +IY EN +G++ + C EKR+ FRL+SGL SSI TQIANDYRFD+G +GPN + F AVG HPDRLTNMYF Y+F+LRA+ KA P L Y+Y TGN +D T QL+ LV + E G V++ N + P +C+ GF+E G+F V + DAV+ E+ L+++F+ KFHNISRIMDCVGCEKCK+
Sbjct: 165 EKELGRIDRSHSDPKADYFNPWEEMAHPSNVWTEQEEREDAMAYVNLELNPERFTGYSGASAWRVWKAIYLENCFEGFEGGKSVCREKRVFFRLISGLQSSITTQIANDYRFDNGRYGPNVEFFTRAVGAHPDRLTNMYFAYLFLLRALAKAAPVLKHYDYATGNAREDAHTMQLLQALVDHQSEPSLPQLANGAVTLFNGXXXXXXXXXXAAPHTLCMGGFNETGMFEVEAAQRSPLDAVYARELEE-KRELREQFVAKFHNISRIMDCVGCEKCKM 441
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: W7U2W8_9STRA (Endoplasmic oxidoreductin-2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2W8_9STRA) HSP 1 Score: 203 bits (516), Expect = 1.930e-58 Identity = 113/267 (42.32%), Postives = 155/267 (58.05%), Query Frame = 1
Query: 19 ERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIY---WENLKGYQDNA--CMEKRILFRLLSGLHSSIMTQIANDYRFDDGT--WGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLF---GVASGDAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
E G VD ++ D+F W E +A VW Q+E +G Y+NL NPE+FTGY+G SA R W ++Y +E G + C+EKR+ +RL++GL SSI T +A +Y +D W PNT +FV VG HP+R+ N+YFTY+F+LRAI KA P L+ Y+YDTGN DD+ R + LV T + C + FDE G+F G+ G A A +E L+Q+F +FHNISR+MDCVGCEKC++
Sbjct: 150 EMHLGAVDRKEAMVGVDAFAGWEEGDNARVWIEQEEEDQGMTYINLLRNPERFTGYAGPSARRAWNAVYENCFELSPGELEAGGHCLEKRVFYRLIAGLQSSISTHLALEY-YDKAQDCWFPNTALFVEKVGKHPERIHNLYFTYLFLLRAINKAGPELLLYDYDTGNSEDDECVRSAVQNLVRTSSNTS--------------TADQCHRAFDESGMFQPRGLTDG-AEAAAEEERELHKLRQDFFVRFHNISRVMDCVGCEKCRL 400
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A8K1C292_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C292_PYTOL) HSP 1 Score: 195 bits (496), Expect = 1.560e-55 Identity = 111/270 (41.11%), Postives = 160/270 (59.26%), Query Frame = 1
Query: 19 ERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL---KGYQDNA----CMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPM----CLKGFDEKGLFGVASGDAVFE--AGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
E + +VD + ++ A ++FN W+E + VWS Q+E + Y+NL NPE++TGYSG A R+W +IY EN QD C+E+R+ +RL+SGL +SI T IA Y+ D WGPN +FV+ VG HP+RL N+YF Y+FV+RAIG+ R L++Y++ TGND DD+ R+++ LV D +R S P L GFDE+ LF V G ++ ++ L+ +F KF N+SRIMDCV CEKC++
Sbjct: 169 ESELSRVDRTNAA-AGENFNEWTEGSSPEVWSNQEEA-DNMMYINLLENPERYTGYSGYQAERIWKAIYQENCFTPAHAQDKELTGMCLEERVYYRLISGLQASINTHIALRYKHGDW-WGPNPSLFVHRVGKHPERLQNLYFVYLFVMRAIGRYRDELLSYDFTTGNDADDQRLREILKLLVV--------------DDKRHSSCPSEQKSVLSGFDERALFRVQRGGMSYDQYVDAKEQKRELELQFREKFQNVSRIMDCVTCEKCRL 421
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A7S1CNX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNX9_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.600e-55 Identity = 106/247 (42.91%), Postives = 139/247 (56.28%), Query Frame = 1
Query: 106 VWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWEN-LKGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGVASGDAVFEA-----GQED-------------GSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
W++QDE G YVN+ +NPE+ T Y+GA+ RVWGS+Y EN G D C E+R+ R++SG+ SI + IA Y DGT+GPN +++ +G HPDRL N+YFTY+FV+RAI KA+P L +TG DD+ TR+L+ L S E VP L+GFDE +F V + + V E G ED LK F KFHNISRIMDCVGCEKC++
Sbjct: 152 AWTVQDEDSPGMTYVNVAMNPERDTKYTGANTRRVWGSVYKENCFDGPFDGLCFEERVFQRIISGIQGSISSHIAAQYSQGDGTFGPNLDLYLRMIGRHPDRLKNLYFTYLFVMRAIAKAKPILEGLLVNTGVPDDDQRTRELLASLTSQE-------------------VPAVLRGFDESSMFKVKAEELVAECPPVLHGLEDLHDLQHRYVDEAAKKAKLKDSFRAKFHNISRIMDCVGCEKCRL 379
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A3R7IKS5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IKS5_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.380e-55 Identity = 113/252 (44.84%), Postives = 153/252 (60.71%), Query Frame = 1
Query: 61 ADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL-----KGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGV-ASG---DAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
A +SFN W E ++A VW+ Q E E Y+NL NPE++TGYSG A R+W +IY EN + D+ C+E+R+ +RL+SGL +SI T IA YRF + WG N +FV VG H +RL N+YFTY+FV+RAI K R L AY+Y+TGN DD+ +++ +L+ E +A V + S L GFDE LF V A G D + +A QE L+ +F KF N+SRIMDCV CEKC++
Sbjct: 146 AGESFNEWEEVSNANVWATQGESEEAMAYINLLENPERYTGYSGVQAERIWRAIYDENCFTPPEESAVDSMCLEERVYYRLISGLQASINTHIALTYRFGE-QWGVNPSLFVFRVGKHRERLQNLYFTYLFVMRAISKYRHELFAYDYNTGNVADDQRVNEILRQLL-LEGSDDARSTGVSCPAHAECSS--VLSGFDESALFRVQADGLSLDQLAQAKQEKEQ--LEVQFREKFQNVSRIMDCVTCEKCRL 391
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: G4YPK6_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YPK6_PHYSP) HSP 1 Score: 194 bits (493), Expect = 4.300e-55 Identity = 113/252 (44.84%), Postives = 154/252 (61.11%), Query Frame = 1
Query: 61 ADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL-----KGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGV-ASG---DAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
A +SFN W E ++A VW+ Q E E Y+NL NPE++TGYSG A R+W SIY EN + D C+E+R+ +RL+SGL +SI T IA Y+F + +WG N +FVN VG H +RL N+YF Y+FV+RAI K R L+AY+Y+TGN DD R+++ +L+ E +A V + S L GFDE LF V A G D + +A QE L+ +F KF N+SRIM+CV CEKC++
Sbjct: 176 AGESFNEWEEVSNANVWATQGEAEETMTYINLLENPERYTGYSGVQAERIWKSIYEENCFTPPEESKLDGMCLEERVYYRLISGLQASINTHIALTYKFGN-SWGMNPSLFVNRVGKHRERLQNLYFAYLFVMRAISKYRHELLAYDYNTGNAADDLRVREILRQLL-LEGSDDARASGVSCPAYAECSS--VLSGFDESALFRVQADGLSIDQLVQAKQEKEQ--LEVQFREKFQNVSRIMNCVTCEKCRL 421
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: W2IL98_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2IL98_PHYPR) HSP 1 Score: 194 bits (492), Expect = 5.350e-55 Identity = 116/266 (43.61%), Postives = 159/266 (59.77%), Query Frame = 1
Query: 19 ERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL-----KGYQDNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGV-ASG---DAVFEAGQEDGSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
E KVD +++ A ++F W E + A VW+ Q E E Y+NL NPE++TGYSG A R+W +IY EN + DN C+E+R+ +RL+SGL +SI T IA Y+F D WG N +FV+ VG H +RL N+YF Y+FV+RAI K R L+AY+Y+TGN DD R+++ +L+ E +A V + S L GFDE LF V A G D + +A QE L+ +F KF N+SRIMDCV CEKC++
Sbjct: 158 ESTLSKVDR-KNAAAGETFKEWEEVSSANVWATQGEAEEMMTYINLLENPERYTGYSGIQAERIWQAIYKENCFTPSEESVLDNLCLEERVYYRLISGLQASINTHIALTYKFGD-KWGVNPSLFVSRVGKHRERLQNLYFAYLFVMRAISKYRHELLAYDYNTGNAADDLRVREILRQLL-LEGSDDARASGVSCPAYAECSS--VLSGFDESALFRVQADGLTLDQLAQAQQEKEQ--LEVQFREKFQNVSRIMDCVTCEKCRL 416
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A5D6YAX0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAX0_9STRA) HSP 1 Score: 194 bits (492), Expect = 8.380e-55 Identity = 110/264 (41.67%), Postives = 156/264 (59.09%), Query Frame = 1
Query: 28 FGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL----KGYQ---DNACMEKRILFRLLSGLHSSIMTQIANDYRFDDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGVASGDAVFEAGQEDGSM---ALKQEFMHKFHNISRIMDCVGCEKCKV 789
KVD + + A + F W E +WS Q E GE Y+NL NPE++TGYSG A RVW +IY EN G++ + C+E+R+ +RL+SGL +SI T IA Y++ D TW N +FVN VG H +RL N+YFTY+FV+RA+G+ R L+ Y+Y TGN DD+ R+++ ++V + E + + S L GFDE+ LF V G + A ED + AL+ +F +F N+SRIMDCV CEKC++
Sbjct: 181 LSKVDRTNA-VAGEGFRGWQEQQSPEIWSNQGEAGETMAYINLLENPERYTGYSGYQAERVWHAIYQENCFTPALGHEQSLEGMCLEERVYYRLISGLQASINTHIALRYKYGD-TWDTNPSLFVNRVGKHRERLENLYFTYLFVMRALGRYREQLLQYDYSTGNTADDQRVREVLRQVVFEDAEATSCPTA---------SRSAVLAGFDEQALFRVPRGQLSY-AEYEDATAQKRALEVQFRARFQNVSRIMDCVTCEKCRL 432
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Match: A0A7S2DCT6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCT6_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.870e-54 Identity = 110/252 (43.65%), Postives = 150/252 (59.52%), Query Frame = 1
Query: 82 WSEAADAAVWSLQDEGGEGFEYVNLDLNPEKFTGYSGASAARVWGSIYWENL--KGYQDNA-CMEKRILFRLLSGLHSSIMTQIANDYRF-----DDGTWGPNTKMFVNAVGMHPDRLTNMYFTYVFVLRAIGKARPFLMAYEYDTGNDGDDKLTRQLINELVSTEQEKEAGMVSVDNDMRRDDSVPMCLKGFDEKGLFGVASGDAVFEAGQED--------GSMALKQEFMHKFHNISRIMDCVGCEKCKV 789
WSE + + VW QDE G YV+L NPE++TGYSG A RVW +I+ EN + D C+EKRI FRL+SGL +SI T IA +Y F + G WGPNT++FV+ VG H DRL N+YFTY+F+LRA+ KA P L A +DTG+ +D +R L+ LV + + + +C +GFDE LF + D+ E G + ++ L++EF +F NISRIMDCVGCEKC++
Sbjct: 174 WSEGSSSDVWIDQDEA-SGMVYVDLLENPERYTGYSGPHARRVWQAIHEENCFESDFGDRGQCLEKRIFFRLISGLQASINTHIATNYLFGGAYGEGGHWGPNTQLFVDRVGRHSDRLHNLYFTYLFLLRALAKAAPALEASHFDTGHAEEDSRSRALVRALVRPDHPL----------LDASQAAQVCQRGFDESRLFQM---DSELEEGMTEFEQYMAMRRTLELRKEFQERFRNISRIMDCVGCEKCRL 411 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12387.1977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12387.1977.1 >prot_Ecto-sp13_S_contig12387.1977.1 ID=prot_Ecto-sp13_S_contig12387.1977.1|Name=mRNA_Ecto-sp13_S_contig12387.1977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=263bp QENSEAERDFGKVDHSQSSPADDSFNPWSEAADAAVWSLQDEGGEGFEYVback to top mRNA from alignment at Ecto-sp13_S_contig12387:27..3460+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12387.1977.1 ID=mRNA_Ecto-sp13_S_contig12387.1977.1|Name=mRNA_Ecto-sp13_S_contig12387.1977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3434bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12387:27..3460+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12387:27..3460+ >mRNA_Ecto-sp13_S_contig12387.1977.1 ID=mRNA_Ecto-sp13_S_contig12387.1977.1|Name=mRNA_Ecto-sp13_S_contig12387.1977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=789bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12387:27..3460+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |