prot_Ecto-sp13_S_contig839.19759.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig839.19759.1
Unique Nameprot_Ecto-sp13_S_contig839.19759.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length112
Homology
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: D8LJ56_ECTSI (INCENP_ARK-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ56_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 8.020e-65
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0
Query:    1 MSDHDGDTSESESDEEEMRERSRRSGKKIPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAKVQKH 111
            MSDHDGDTSE       MRERSRRSGKKIPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAKVQKH
Sbjct:  167 MSDHDGDTSEXXXXXXXMRERSRRSGKKIPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAKVQKH 277          
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: A0A6H5KX29_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX29_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 8.250e-58
Identity = 102/111 (91.89%), Postives = 102/111 (91.89%), Query Frame = 0
Query:    1 MSDHDGDTSESESDEEEMRERSRRSGKKIPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAKVQKH 111
            MSDHDGDTS        MRERSRRSGKKIPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPV KSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAKVQKH
Sbjct: 1413 MSDHDGDTSXXXXXXXXMRERSRRSGKKIPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVTKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAKVQKH 1523          
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: A0A7S2M2L9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M2L9_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 8.120e-22
Identity = 48/82 (58.54%), Postives = 56/82 (68.29%), Query Frame = 0
Query:   27 KKIPAWAKGSALSEALTRQYATG-QKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAK 107
            KK+P WA+   L  AL RQ+A G  ++DPDKIF EV TC+LE IF   KSRY RR SS NWT D VT  E LTYKR++G  K
Sbjct:  228 KKVPEWAQRHNLHRALERQFADGPNRLDPDKIFGEVLTCNLEEIFDKKKSRYQRRTSSGNWTKDHVTIAEKLTYKRTMGYQK 309          
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: A0A4D9CUD1_9STRA (INCENP_ARK-bind domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUD1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.150e-20
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0
Query:   15 EEEMRERSRRSGKKIPAWAKGSALSEALTRQYATGQK--VDPDKIFPEVF-TCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAK 107
            +EE  +R RRS KKIP WA+G+AL+ AL RQ+ T     VDPD IFPEV  TC+LE IF V K RY++R SS  W  D VTP E +TY+R++   +
Sbjct:  322 DEEAWDRRRRSAKKIPNWARGTALATALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGVTPVERMTYRRAMAYER 417          
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: A0A7S2S9K2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9K2_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.240e-20
Identity = 44/82 (53.66%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   27 KKIPAWAKGSALSEALTRQYATG-QKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAK 107
            KK+P WA  S L +AL RQ+  G  ++DPD++FP+V TCDLEAIF   K RY  R SSANW  D V+  E L YKR++G  K
Sbjct:  167 KKVPEWAMRSNLLKALERQFLDGPDRIDPDQLFPQVTTCDLEAIFDQKKKRYATRTSSANWAKDSVSAAETLVYKRTMGFDK 248          
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: B7FZQ8_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZQ8_PHATC)

HSP 1 Score: 94.7 bits (234), Expect = 2.310e-20
Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   20 ERSRRSGKKIPAWAKGSALSEALTRQYATGQ-KVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAK 107
            E SR+  K++P WA+ S L  AL +QY      +DPD+IF EV TCDLEAIF   K+RY RR SS NW+ DR T  E LTYKR++G A+
Sbjct:  508 EESRKPRKRVPMWAEKSNLIPALEKQYTVNTGTLDPDEIFGEVQTCDLEAIFDQRKTRYQRRTSSGNWSKDRATTYEKLTYKRTMGYAQ 596          
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: A0A7S3Q8T4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8T4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 8.320e-20
Identity = 55/108 (50.93%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 MSDHDGDTSESESDEEEMRERSRRSGKKIPAWAKGSALSEALTRQYATG-QKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAK 107
            MSD +GD+ E ESD  +  E  +   KK+P WA+   L  AL RQ+     +VDPD IF EV TCDLEAIF   K RY +R S+ NWT DRVT  E L YKR +G  K
Sbjct:  651 MSDREGDSDE-ESDASDYYEE-KGPKKKVPKWAQKDRLLPALERQFLDNPDRVDPDTIFHEVSTCDLEAIFGQRKKRYAKRASTGNWTKDRVTASEKLVYKRKMGFQK 756          
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: A0A1E7FGC0_9STRA (INCENP_ARK-bind domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGC0_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.650e-19
Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 0
Query:   27 KKIPAWAKGSALSEALTRQY---ATGQKVDPDKIFPEVFTCDLEAIFPVNKSR-YHRRGSSANWTPDRVTPQEVLTYKRSVGIA 106
            KKIP WA  + L  AL +QY      +KVDPD+IFPEV +CDLEAIF   K++ Y  R SS NW  D+VT  E L YKR +G A
Sbjct:   31 KKIPTWALRANLYPALEKQYNGHIGSRKVDPDEIFPEVQSCDLEAIFGTKKAKAYRSRASSGNWAQDKVTVAEKLVYKREMGFA 114          
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: A0A448ZSM0_9STRA (INCENP_ARK-bind domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSM0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.530e-19
Identity = 48/87 (55.17%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   24 RSGKKIPAWAKGSALSEALTRQY---ATGQKVDPDKIFPEVFTCDLEAIFPVNKSR-YHRRGSSANWTPDRVTPQEVLTYKRSVGIA 106
            R  KKIP WA+ S L  AL  QY     G+K+DPD+IFPEV +CDLEAIF   KS+ Y  R SS NW  D+VT  E L YKR +G A
Sbjct:  421 RMNKKIPTWAQRSNLYSALEEQYNGRIGGKKIDPDEIFPEVHSCDLEAIFGRRKSKNYRSRASSGNWANDQVTAAEKLVYKRQMGFA 507          
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Match: A0A7S4ACS3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ACS3_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 9.890e-19
Identity = 48/84 (57.14%), Postives = 54/84 (64.29%), Query Frame = 0
Query:   27 KKIPAWAKGSALSEALTRQY---ATGQKVDPDKIFPEVFTCDLEAIFPVNKSR-YHRRGSSANWTPDRVTPQEVLTYKRSVGIA 106
            KKIP WA+ S L  AL  QY     G+KVDPD+IFPEV +CDLEAIF   KS+ Y  R SS NW  D VT  E L YKR +G A
Sbjct:  579 KKIPTWAQRSNLYSALEEQYNGRIGGKKVDPDEIFPEVHSCDLEAIFGRRKSKNYRSRASSGNWANDEVTVAEKLVYKRGMGFA 662          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig839.19759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ56_ECTSI8.020e-6593.69INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
A0A6H5KX29_9PHAE8.250e-5891.89SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2M2L9_9STRA8.120e-2258.54Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A4D9CUD1_9STRA1.150e-2053.13INCENP_ARK-bind domain-containing protein n=3 Tax=... [more]
A0A7S2S9K2_9STRA1.240e-2053.66Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B7FZQ8_PHATC2.310e-2053.93Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S3Q8T4_9STRA8.320e-2050.93Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1E7FGC0_9STRA1.650e-1953.57INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
A0A448ZSM0_9STRA3.530e-1955.17INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
A0A7S4ACS3_9STRA9.890e-1957.14Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005635Inner centromere protein, ARK-binding domainPFAMPF03941INCENP_ARK-bindcoord: 6..70
e-value: 1.6E-18
score: 66.4
IPR039130Inner centromere proteinPANTHERPTHR13142INNER CENTROMERE PROTEINcoord: 27..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig839contigEcto-sp13_S_contig839:5556..7114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig839.19759.1mRNA_Ecto-sp13_S_contig839.19759.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig839 4792..7292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig839.19759.1 ID=prot_Ecto-sp13_S_contig839.19759.1|Name=mRNA_Ecto-sp13_S_contig839.19759.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp
MSDHDGDTSESESDEEEMRERSRRSGKKIPAWAKGSALSEALTRQYATGQ
KVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYK
RSVGIAKVQKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005635Inner_centromere_prot_ARK-bd
IPR039130INCENP