prot_Ecto-sp13_S_contig8387.19755.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8387.19755.1
Unique Nameprot_Ecto-sp13_S_contig8387.19755.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length109
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8387.19755.1 vs. uniprot
Match: D7FKV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV9_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 5.710e-25
Identity = 43/48 (89.58%), Postives = 47/48 (97.92%), Query Frame = 0 
Query:   57 PYIPLGHPPNRARRHKGHYGWTLRTMLWALEEFYVIGTFVPIAPEVSV 104
            PYIPLGHPP+RARRHKG+YGWTLR MLWALEEFYVIGTFVPIAPE++V
Sbjct:   57 PYIPLGHPPDRARRHKGNYGWTLRKMLWALEEFYVIGTFVPIAPEIAV 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8387.19755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKV9_ECTSI5.710e-2589.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8387contigEcto-sp13_S_contig8387:4823..5932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8387.19755.1mRNA_Ecto-sp13_S_contig8387.19755.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8387 4823..5932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8387.19755.1 ID=prot_Ecto-sp13_S_contig8387.19755.1|Name=mRNA_Ecto-sp13_S_contig8387.19755.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=109bp
WPRHQGPQLEDGTRGWRTSPSSARSRSASWGGSTASIERTRRRPCGLLTA
VLATIPPYIPLGHPPNRARRHKGHYGWTLRTMLWALEEFYVIGTFVPIAP
EVSVQVGL*
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