mRNA_Ecto-sp13_S_contig8362.19730.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: A0A6H5JHK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK0_9PHAE) HSP 1 Score: 182 bits (463), Expect = 3.980e-50 Identity = 104/179 (58.10%), Postives = 121/179 (67.60%), Query Frame = 3
Query: 18 NIDQLLELEAELTNEAPSL----GRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDCDGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEFQDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGVTRCLQ 542
+I +LL LEAEL N RDAK+NLLK+LQIR V ++E AYD L YEL+K GLE LR I PAR ++LLQPKVLE QDC+ D A QL FYLADA+LAK LDELV + + CE EVKS ST+RKASK GGDVRKV DMARVSV+CD PE L+R Y + Q
Sbjct: 4 DIAELLRLEAELENSCEDCRNPYDRDAKLNLLKFLQIRAVLQYEEAYDRLYYELNKHGGLECLREIAPARLKDLLQPKVLELQDCNEDVRFAAQLEFYLADAELAKNRLDELVADIAKHTGECEVHCAEVKSRASTQRKASKSYGGDVRKVADMARVSVICDNPEALKRAYLAIVESFQ 182
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: A0A6H5K147_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K147_9PHAE) HSP 1 Score: 183 bits (465), Expect = 2.220e-46 Identity = 114/231 (49.35%), Postives = 143/231 (61.90%), Query Frame = 3
Query: 18 NIDQLLELEAELTNEAPS----LGRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDCDGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEF--QDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGVTRCLQVSKISRLPKSPNYRTDAV*KYRWCPAVRSTLFKYIGSIEFPKGSNHFCVV 692
+I++L +LEA+L S RDAKVN+LKYLQI+ V RF+ AYDDL YEL+K+ GLE LR+IVP R +E+LQPKVLE QDCD D L K+L FYLADA+L K LDELV K+ D C+F Q V+VKS TR KA K CGGDVRKV DMARV+VVC PE L+ VY +T + + R+ + +D W P+ Y P +NH C +
Sbjct: 101 DIEELCDLEAKLKTSRGSDTSPASRDAKVNILKYLQIKAVTRFQEAYDDLYYELNKKGGLECLRSIVPIRWKEVLQPKVLELQDCDEDEELEKKLDFYLADAELTKPHLDELVSKIAHD--SCKFVVQYVDVKSRDRTREKARKSCGGDVRKVADMARVTVVCATPEALKEVYSAITGLPKPHHVLRVKNG--FNSD------WMPSG------YRDVKVNPVVNNHLCEI 315
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI) HSP 1 Score: 180 bits (457), Expect = 1.020e-45 Identity = 100/174 (57.47%), Postives = 121/174 (69.54%), Query Frame = 3
Query: 18 NIDQLLELEAELTN----EAPSLGRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDCDGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEFQDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGV 527
+I+ LL LEAEL E S DAKVNLLKYLQ++TV +F++AYDDL YELSK GL+ LR I P S + QPKV +PQDC D L QL+FYLADA+LAK LDELV V D+ E Q V+VKS +STRRKAS+FC GDVRKV D+ARV+V+C PE L+ Y +
Sbjct: 5 DINDLLRLEAELKTSRERETSSTSLDAKVNLLKYLQVQTVLQFQAAYDDLYYELSKTGGLDCLRTIAPVPSTGVFQPKVFDPQDCGEDEQLENQLQFYLADAELAKAHLDELVMNVAHDMSKYEVQFVDVKSRESTRRKASRFCDGDVRKVADIARVTVICTTPEALKEAYLAI 178
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: A0A6H5KHN5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN5_9PHAE) HSP 1 Score: 181 bits (460), Expect = 1.330e-45 Identity = 103/179 (57.54%), Postives = 121/179 (67.60%), Query Frame = 3
Query: 18 NIDQLLELEAELTNEAPSL----GRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDCDGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEFQDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGVTRCLQ 542
+I +L LEAEL N + RDAK+NLLK+LQI+ V +FE AYD L YEL+K GL+ LR I PAR ++LLQPKVLE QDC D A QL FYLADAKLAK LDELV + +D GC+ EVKS ST+RKA K GDVRKVTDMARVSV+CD PE L+R Y + Q
Sbjct: 1431 DIAELRRLEAELENSCETCQNPYDRDAKLNLLKFLQIKAVLQFERAYDHLYYELNKHGGLKCLREITPARPKDLLQPKVLELQDCHEDVRFAAQLEFYLADAKLAKNRLDELVVDIAKDTGGCQVHCAEVKSRASTQRKARKSYDGDVRKVTDMARVSVICDTPEALKRAYLAIVESFQ 1609
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE) HSP 1 Score: 174 bits (440), Expect = 1.460e-45 Identity = 97/174 (55.75%), Postives = 122/174 (70.11%), Query Frame = 3
Query: 18 NIDQLLELEAELT----NEAPSLGRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDCDGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEFQDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGV 527
+I++LL LE EL E DAK+N+LK LQ++TV +F+ AYDDL YEL+KE GLE LR+I PARS ++QPKVL+PQ+CD L QL+FYLADA+LAK LDEL+ KV D + Q +VKS +STRRKAS CGGDVRKV DMARV+V+C PE L+ Y +
Sbjct: 4 DIEELLRLENELKASCERETSPATPDAKMNILKCLQVQTVVQFQLAYDDLYYELNKEGGLECLRSIAPARSTGIVQPKVLDPQNCDEGGQLENQLQFYLADAELAKPHLDELITKVAHDSSKYKVQCADVKSWESTRRKASNSCGGDVRKVADMARVAVICATPEALKEAYLAI 177
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: A0A6H5KZG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG4_9PHAE) HSP 1 Score: 178 bits (451), Expect = 1.530e-45 Identity = 103/185 (55.68%), Postives = 128/185 (69.19%), Query Frame = 3
Query: 18 NIDQLLELEAELTNEA----PSLGRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDC-DGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEFQDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGVTRCLQVSKIS 557
+I L+ LEAEL P + RDAKVNLLKYLQI+TV +FE+AYD+L YEL KE GLE LR+I P RS++ QPKVLE C D D LA QL FYLA A+LAK+ LDE++ + +D E Q VEVKS +ST+RK +F GGDVRKV DMARVSV+C PEDL+ VY + L V +++
Sbjct: 4 DIKDLIGLEAELKKSCDSATPPVVRDAKVNLLKYLQIQTVLQFEAAYDNLYYELGKEGGLECLRDIAPFRSKDFSQPKVLELHGCGDEDVRLANQLEFYLAGAELAKRRLDEIITNLADDWGRYEVQHVEVKSRESTQRKVRRFYGGDVRKVADMARVSVICLTPEDLQHVYSDIMGSLDVRRVT 188
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: D7FGT0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT0_ECTSI) HSP 1 Score: 178 bits (452), Expect = 9.870e-45 Identity = 101/179 (56.42%), Postives = 119/179 (66.48%), Query Frame = 3
Query: 18 NIDQLLELEAELTNEAPSL----GRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDCDGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEFQDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGVTRCLQ 542
+I +L LEAEL N RDAK+NLLK+LQI+ V +FE AYD L YEL+K+ GL+ LR I PAR ++LLQPKVLE QDC D A QL FYLADAKLAK LDELV + + GC+ Q EVKS ST+RKA K G DVRKV DMARVSV+CD PE +R Y + Q
Sbjct: 4 DIAELRRLEAELENSCEECQNPYDRDAKLNLLKFLQIKAVLQFERAYDQLYYELNKDGGLKCLREITPARPKDLLQPKVLELQDCHEDVRFAAQLDFYLADAKLAKNHLDELVADITKGTGGCQVQCAEVKSRASTQRKARKSYGADVRKVADMARVSVICDTPETFKRAYLAIVESFQ 182
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: D7FXH0_ECTSI (Tetratricopeptide repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH0_ECTSI) HSP 1 Score: 178 bits (451), Expect = 1.610e-44 Identity = 101/179 (56.42%), Postives = 118/179 (65.92%), Query Frame = 3
Query: 18 NIDQLLELEAELTNEAPSL----GRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDCDGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEFQDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGVTRCLQ 542
+I +LL LEAEL N RDAK+NLLK+LQIR V +FE AYD L YEL+K GLE LR I PAR ++LLQPKVLE QDC+ A QL FYLADA+LAK LDELV + E CE EVKS T+RKA K GGDVRKV DMAR+SV+CD P+ L+R Y + Q
Sbjct: 4 DIAELLRLEAELENSCEDCQNPYDRDAKLNLLKFLQIRAVLQFEEAYDQLYYELNKHGGLECLREIAPARPKDLLQPKVLELQDCNEGVRFAAQLEFYLADAELAKNRLDELVADIAEHTGECEVHCAEVKSRAITQRKARKSYGGDVRKVADMARISVICDNPQALKRAYLAIVESFQ 182
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: D7FH93_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH93_ECTSI) HSP 1 Score: 172 bits (437), Expect = 4.780e-44 Identity = 109/229 (47.60%), Postives = 134/229 (58.52%), Query Frame = 3
Query: 18 NIDQLLELEAELT----NEAPSLGRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDCDGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEFQDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGVTRCLQVSKISRLPKSPNYRTDAV*KYRWCPAVRSTLFKYIGSIEFPKGSNHFCVV 692
+I++L+ LEAEL +E + DAKVN+LKYLQ++TV RF+ YD L YEL+K GLE LR I RS ELLQPKVL QDC D L KQL+FYLADA+LAK +LDELV KV D E Q EVKS +STRRKAS+ GDVRKV DMARV+++C PE L+ Y S I +P+ R W P+ Y P + H C +
Sbjct: 4 DINELIRLEAELKTSCESETSPVSLDAKVNILKYLQVQTVLRFQGQYDGLYYELNKTGGLECLRGIAAVRSTELLQPKVLGLQDCSEDEQLEKQLQFYLADAELAKPNLDELVTKVAHDSSKYEVQRAEVKSRESTRRKASREHDGDVRKVADMARVTLICANPEALKEAY---------SSIMEMPEQHVLRIKNGFNSDWMPSG------YRDVKLNPVVNEHLCEI 217
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Match: D8LQL3_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL3_ECTSI) HSP 1 Score: 174 bits (440), Expect = 4.790e-44 Identity = 108/229 (47.16%), Postives = 140/229 (61.14%), Query Frame = 3
Query: 18 NIDQLLELEAELTNEA----PSLGRDAKVNLLKYLQIRTVKRFESAYDDLQYELSKEEGLERLRNIVPARSEELLQPKVLEPQDC-DGDTLLAKQLRFYLADAKLAKQSLDELVKKVIEDLEGCEFQDVEVKSLKSTRRKASKFCGGDVRKVTDMARVSVVCDKPEDLERVYWGVTRCLQVSKISRLPKSPNYRTDAV*KYRWCPAVRSTLFK---YIGSIEFPKGSNH 680
+I L+ LEAEL P + R AKVNLLKYLQI+TV FE+AYD L YEL KE GLE LR+I P RS++ QPK LE C D D LAKQL FYLADA+LAKQ LDE++ + +D E Q VEVKS +ST+RK + GDVRKVTDMARV+V+C PEDL++VY + + V +++ K+ ++ + P V L + ++G K H
Sbjct: 4 DIKDLIRLEAELKKSCDSVTPPVVRGAKVNLLKYLQIQTVLLFEAAYDTLYYELDKEGGLECLRDIAPFRSKDFSQPKALELYGCVDEDVRLAKQLEFYLADAELAKQRLDEIITNLADDWGRYEVQYVEVKSWESTQRKVRRLYDGDVRKVTDMARVTVICLTPEDLQQVYSDIMGSMDVRRVTNGFKN-DWMPSGYRDVKVNPVVNEHLCEIQLHLGDFSVLKSDQH 231 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8362.19730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8362.19730.1 >prot_Ecto-sp13_S_contig8362.19730.1 ID=prot_Ecto-sp13_S_contig8362.19730.1|Name=mRNA_Ecto-sp13_S_contig8362.19730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp MTDECNIDQLLELEAELTNEAPSLGRDAKVNLLKYLQIRTVKRFESAYDDback to top mRNA from alignment at Ecto-sp13_S_contig8362:5331..6783+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8362.19730.1 ID=mRNA_Ecto-sp13_S_contig8362.19730.1|Name=mRNA_Ecto-sp13_S_contig8362.19730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1453bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8362:5331..6783+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8362:5331..6783+ >mRNA_Ecto-sp13_S_contig8362.19730.1 ID=mRNA_Ecto-sp13_S_contig8362.19730.1|Name=mRNA_Ecto-sp13_S_contig8362.19730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=597bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8362:5331..6783+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |