prot_Ecto-sp13_S_contig8361.19729.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8361.19729.1
Unique Name	prot_Ecto-sp13_S_contig8361.19729.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	188

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: D7FLG8_ECTSI (Transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG8_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 3.350e-114
Identity = 178/185 (96.22%), Postives = 181/185 (97.84%), Query Frame = 0

Query:    1 MMGSMGRFGTLGAGLAAFVLGNGVIAFSPSYIPGHSGPGPTARPPLSSRRCGSRSSAKTRPSASTARVDFGGMDHDHRPEGRKRRIQLRAASAAVPPEAAPSETAGDGAEADKSVMGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDK 185
            M+GSMGRFGTLGAGLAAFVLGNGVIAFSPSYIPGHSGPGPTAR PLSSRRCGSRSSAKTRPSASTARVDFGG+DHDHRPEGRKRR QLRAASAAVPPEAAPS  AGDGAEADKSV+GAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDK
Sbjct:    1 MLGSMGRFGTLGAGLAAFVLGNGVIAFSPSYIPGHSGPGPTARSPLSSRRCGSRSSAKTRPSASTARVDFGGVDHDHRPEGRKRRFQLRAASAAVPPEAAPSGAAGDGAEADKSVIGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDK 185

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: A0A6H5JNV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV9_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 2.870e-107
Identity = 173/187 (92.51%), Postives = 178/187 (95.19%), Query Frame = 0

Query:    1 MMGSMGRFGTLGAGLAAFVLGNGVIAFSPSYIPGHSGPGPTARPPLSSRRCGSRSSAKTRPSASTARVDFGGMDHDHRPEGRKRRIQLRAASAAVPPEAAPSETAGDGAEADKSVMGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDKAS 187
            MMGSMGRFGTLGAGLAAFVL NGVIAFSPSYIPG+SGPGPTAR PLSSR CGSRSS KTRPSASTARVDFGG+DHDHR EG KRR QL AASAAVPPEAAPS TAGDGAEADKSV+GAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYD+DIDKA+
Sbjct:    1 MMGSMGRFGTLGAGLAAFVLVNGVIAFSPSYIPGYSGPGPTARSPLSSRGCGSRSSEKTRPSASTARVDFGGVDHDHRSEGSKRRFQLHAASAAVPPEAAPSGTAGDGAEADKSVIGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDIDIDKAN 187

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: A0A7R9UKU9_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UKU9_DIALT)

HSP 1 Score: 112 bits (280), Expect = 8.870e-27
Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 0

Query:  115 VMGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDK 185
            V+G++Y+FTRPHTI+GTILAS  GVARALIE P+AISL LVP+A+ GLL+LLLGNAFIVGINQIYDV++DK
Sbjct:    2 VLGSLYKFTRPHTIRGTILASFAGVARALIEHPSAISLQLVPQALRGLLALLLGNAFIVGINQIYDVEVDK 72

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: A0A835YU62_9STRA (Tocopherol polyprenyltransferase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU62_9STRA)

HSP 1 Score: 110 bits (275), Expect = 6.930e-26
Identity = 50/80 (62.50%), Postives = 70/80 (87.50%), Query Frame = 0

Query:  106 GDGAEADKSVMGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDK 185
            G+  +  ++   ++Y+FTRPHTI+GTILAS+TGVARALIE+P A+ L L+P+A++G+L+LLLGNA+IVGINQIYDVD+D+
Sbjct:   15 GEPGKGVRATAKSIYKFTRPHTIRGTILASLTGVARALIETPTAVELRLIPRAIMGMLALLLGNAYIVGINQIYDVDVDR 94

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: A0A7S3XLT2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLT2_HETAK)

HSP 1 Score: 110 bits (274), Expect = 8.710e-26
Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = 0

Query:  116 MGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDKAS 187
            + A+Y+FTRPHTI+GTILASVTGVARALIE P  I+L LVP+A LG+ +LL+GNA+IVGINQIYDVDIDK +
Sbjct:   17 LRALYKFTRPHTIRGTILASVTGVARALIEDPQTIALSLVPRAALGMAALLMGNAYIVGINQIYDVDIDKVN 88

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: A0A7S2UTD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTD4_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.010e-25
Identity = 52/74 (70.27%), Postives = 68/74 (91.89%), Query Frame = 0

Query:  114 SVMGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDKAS 187
            +++ ++Y+FTRPHTI+GTILAS TGVARALIE P  ISL+LVP+AVLGL++LL+GNA+IVGINQI+DVD+DK +
Sbjct:   91 NILRSMYKFTRPHTIRGTILASCTGVARALIEHPTQISLNLVPRAVLGLVALLMGNAYIVGINQIFDVDVDKVN 164

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: A0A8J5XDN9_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDN9_DIALT)

HSP 1 Score: 110 bits (274), Expect = 2.590e-25
Identity = 55/71 (77.46%), Postives = 64/71 (90.14%), Query Frame = 0

Query:  115 VMGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDK 185
            V  A+Y+FTRPHTI+GTILAS  GVARALIE P+AISL LVP+A+ GLL+LLLGNAFIVGINQIYDV++DK
Sbjct:   86 VANALYKFTRPHTIRGTILASFAGVARALIEHPSAISLQLVPQALRGLLALLLGNAFIVGINQIYDVEVDK 156

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: H6WB95_VAULI (Tocopherol polyprenyltransferase-like protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB95_VAULI)

HSP 1 Score: 110 bits (275), Expect = 2.630e-25
Identity = 51/72 (70.83%), Postives = 67/72 (93.06%), Query Frame = 0

Query:  114 SVMGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDK 185
            S + ++Y+FTRPHTI+GTILAS+TGV RALIE+P +I+++L+PKA LG+++LLLGNA+IVGINQIYDVDIDK
Sbjct:  115 STLKSIYKFTRPHTIRGTILASLTGVLRALIENPTSINVNLIPKAALGMIALLLGNAYIVGINQIYDVDIDK 186

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: A0A0G4FQG2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FQG2_9ALVE)

HSP 1 Score: 110 bits (276), Expect = 4.300e-25
Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 0

Query:  106 GDGAEADK-----SVMGAVYRFTRPHTIKGTILASVTGVARALIESPNAISLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDKAS 187
            GDG EA       + + AVY+FTRPHTI+GTILASV GVARAL+E+P  + L LVP+A+ GLL LLLGNA+IVG+NQIYDVDID+ +
Sbjct:  176 GDGVEASTISWLPAPLAAVYKFTRPHTIRGTILASVVGVARALVENPECVDLALVPRALFGLLGLLLGNAWIVGVNQIYDVDIDRVN 262

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BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Match: A0A7S2FU36_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FU36_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.000e-23
Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 0

Query:  113 KSVMGAVYRFTRPHTIKGTILASVTGVARALIESPNAI-SLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDKAS 187
            K  + AVY+F RPHTI+GT+LASVTGVARAL E P +I +  L+P AV G+L+LLLGNA IVGINQIYDVDIDK +
Sbjct:   91 KGAVRAVYKFLRPHTIRGTVLASVTGVARALTEVPTSIITWSLLPNAVFGMLALLLGNALIVGINQIYDVDIDKVN 166

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8361.19729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FLG8_ECTSI	3.350e-114	96.22	Transferase n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A6H5JNV9_9PHAE	2.870e-107	92.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7R9UKU9_DIALT	8.870e-27	77.46	Hypothetical protein n=1 Tax=Diacronema lutheri Ta...	[more]
A0A835YU62_9STRA	6.930e-26	62.50	Tocopherol polyprenyltransferase-like protein n=1 ...	[more]
A0A7S3XLT2_HETAK	8.710e-26	73.61	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2UTD4_9STRA	2.010e-25	70.27	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A8J5XDN9_DIALT	2.590e-25	77.46	Uncharacterized protein n=2 Tax=Diacronema lutheri...	[more]
H6WB95_VAULI	2.630e-25	70.83	Tocopherol polyprenyltransferase-like protein n=1 ...	[more]
A0A0G4FQG2_9ALVE	4.300e-25	64.37	Uncharacterized protein n=1 Tax=Chromera velia CCM...	[more]
A0A7S2FU36_9STRA	2.000e-23	68.42	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43009	FAMILY NOT NAMED	coord: 73..185
None	No IPR available	PANTHER	PTHR43009:SF7	HOMOGENTISATE PRENYLTRANSFERASE-RELATED	coord: 73..185
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 22..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..187
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8361	contig	Ecto-sp13_S_contig8361:1275..5696 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8361.19729.1	mRNA_Ecto-sp13_S_contig8361.19729.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8361 607..5754 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8361.19729.1 ID=prot_Ecto-sp13_S_contig8361.19729.1|Name=mRNA_Ecto-sp13_S_contig8361.19729.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bp
MMGSMGRFGTLGAGLAAFVLGNGVIAFSPSYIPGHSGPGPTARPPLSSRR
CGSRSSAKTRPSASTARVDFGGMDHDHRPEGRKRRIQLRAASAAVPPEAA
PSETAGDGAEADKSVMGAVYRFTRPHTIKGTILASVTGVARALIESPNAI
SLDLVPKAVLGLLSLLLGNAFIVGINQIYDVDIDKAS*