prot_Ecto-sp13_S_contig8333.19697.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8333.19697.1
Unique Nameprot_Ecto-sp13_S_contig8333.19697.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8333.19697.1 vs. uniprot
Match: A0A6H5JBT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT9_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.270e-50
Identity = 82/86 (95.35%), Postives = 82/86 (95.35%), Query Frame = 0 
Query:    1 MGEEGNGDDVDMPDYPECPCCVMDEYDRSADRCVGATQSPALGTGTEGLETYSFEDKPLDMSGGEGFAVAALALFGLLTFLPLCTK 86
            MGEEGN DDVDMPDYPECPCCVMDEYDRSADRCVGAT SPA GTGTE LETYSFEDKPLDMSGGEGFAVAALALFGLLTFLPLCTK
Sbjct:  520 MGEEGNDDDVDMPDYPECPCCVMDEYDRSADRCVGATPSPAQGTGTEALETYSFEDKPLDMSGGEGFAVAALALFGLLTFLPLCTK 605
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BLAST of mRNA_Ecto-sp13_S_contig8333.19697.1 vs. uniprot
Match: D8LE42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE42_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 6.990e-15
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    1 MGEEGNGDDVDMPDYPECPCCVMDEYDRSADRCVG 35
            +GEEG+GDDVD+PDYPECPCCVMDEYDRS DRC G
Sbjct:  240 LGEEGDGDDVDVPDYPECPCCVMDEYDRSVDRCSG 274
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BLAST of mRNA_Ecto-sp13_S_contig8333.19697.1 vs. uniprot
Match: A0A6H5J9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X3_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 5.150e-14
Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 0 
Query:    9 DVDMPDYPECPCCVMDEYDRSA-----DRCVGATQSPALGTGTE---------GLETYSFEDKPLDMSGGEGFAVAALALFGLLTFLPLCTK 86
            D D+PDYP+CPCCV+D Y++ A      RCV A+ +P+    TE         G +  SF+D   +M+ GE  A++AL L   LTF P C+K
Sbjct:  477 DEDLPDYPDCPCCVLDIYEQDAFNLDGQRCVSASPAPSSPALTEIPVGEITPRGFDDLSFDDGGWEMNAGEVAALSALGLLAALTFFPFCSK 568
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8333.19697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JBT9_9PHAE1.270e-5095.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE42_ECTSI6.990e-1585.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9X3_9PHAE5.150e-1441.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..65
NoneNo IPR availableTMHMMTMhelixcoord: 62..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8333contigEcto-sp13_S_contig8333:840..2602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8333.19697.1mRNA_Ecto-sp13_S_contig8333.19697.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8333 461..2631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8333.19697.1 ID=prot_Ecto-sp13_S_contig8333.19697.1|Name=mRNA_Ecto-sp13_S_contig8333.19697.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
MGEEGNGDDVDMPDYPECPCCVMDEYDRSADRCVGATQSPALGTGTEGLE
TYSFEDKPLDMSGGEGFAVAALALFGLLTFLPLCTK*
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