prot_Ecto-sp13_S_contig8329.19691.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8329.19691.1
Unique Nameprot_Ecto-sp13_S_contig8329.19691.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length746
Homology
BLAST of mRNA_Ecto-sp13_S_contig8329.19691.1 vs. uniprot
Match: A0A6H5JRA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA7_9PHAE)

HSP 1 Score: 745 bits (1924), Expect = 3.290e-255
Identity = 572/787 (72.68%), Postives = 586/787 (74.46%), Query Frame = 0
Query:    1 MLALDTLKWSTLEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKNWNTQ-----VLTFQFRKNLWSMAVCDMGEPPPDELNANQSSTSRGKRSSASPLRVTILDNPVIGRTEPSRGGSDEPKAAPAPPSSNNTNDERPQNEPLGEPGQQPKMKDPAPSSSLAGSLAPGGLKGNANNKNSNAAXXXX----AATEHSATAMVAMMPHQRHGHTCFVWDPRQAALACNGGXXXXXXXXXXXXXXXXXARASPVSPMRGGQNRGNRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNNNTTALPLSRKGVGGXXXXXXXXXXXXXXXXXXXXXXSSPTDESLPNPCIVTFGGSALRTGGGYARAALHVLEAPAPEDGGRGNDDNDSDKDGGGRKCSSPSTGILASLELAADAPKQTFNKFQSCTNSVLLKVHSLRQLGNEQLTFGDSYNPEDLSYIDLKVQSVVLGVGDRNLQVGGRRGHTKGTTGW---------------C---LYSSNSCRSSDNVEDEQPHSTH----GGLLVGFPQVKAFLADARPANARIRPVSAPAHLVEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTHAASDSS---------RLARPNSRIATASGGRHLHXXXXXXXXXXXXXXXXXXXXXXVGDNNHASTGEGSASFGGTTDGGLGGSLTLGERDGDTPTLFYHRSVPGGAXXXXXXXXX---GNLGRVPMLGRRPLLVPKATMAAHNGRLLMEHEWADAGFF 744
            MLALDTL+WS LEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKNWNTQ     VLT QFRKNLWSMAVCDMGEPPPDELNANQSSTS+GKRSSASPLRVTILDNPVIG+T+PSRGGSDEP AAPA PS NNT+DERPQNEP  EPGQQPK+K+P PSSSLAG LA GGLK           XXXX    AATEHSA AMVAMMPHQRHGHTCFVWDPRQAALACNGG       XXXXXXXXXX                   XXXXXX                      +N     LP SRK         XXXXXXX          SSPTDESLP+PCIVTFGGSALRTGGGYARAALHVLE PAPEDGGRGNDDNDSDKDGGGRK SSPSTGILASLE AA APKQTFNKFQS TNSVLLKVHSLRQLGNEQL+FGDSYNP+DLSYIDLKVQSVVLGVG R L+  G       TT                 C   L S  S  S       QP   +    GG   GFPQVKAF+ADARP NARIRPVSAPAHLVEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  RLARPNSRIATA       XXXXXXXXXXXXXXXXXXXXXXVGDNNHASTGEGSAS GGTT  GLGGSLTLG   G TPTLFYHRSVPGGAXXXXXXXXX   GNLGRVPMLG RPLLVPK TMAAHNGRLLMEHEWADA FF
Sbjct:  296 MLALDTLQWSILEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKNWNTQGGNGKVLTCQFRKNLWSMAVCDMGEPPPDELNANQSSTSKGKRSSASPLRVTILDNPVIGKTQPSRGGSDEPIAAPATPSPNNTDDERPQNEPRREPGQQPKVKNPPPSSSLAGILASGGLKXXXXXXXXXXXXXXXXXXKAATEHSAAAMVAMMPHQRHGHTCFVWDPRQAALACNGGGAEAGDGXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXRSNCGAGGGASRKSSPKRPRGGENXXXXPLPSSRKXX-------XXXXXXXRSRNRRTPMPSSPTDESLPHPCIVTFGGSALRTGGGYARAALHVLETPAPEDGGRGNDDNDSDKDGGGRKGSSPSTGILASLESAAGAPKQTFNKFQSFTNSVLLKVHSLRQLGNEQLSFGDSYNPDDLSYIDLKVQSVVLGVGGRTLEADGSDEDRNSTTAEGSRAIKRANVKPPHPCAGRLGSYQSIFSDSKTRVTQPSVCNTTRAGGFWSGFPQVKAFIADARPPNARIRPVSAPAHLVEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLARPNSRIATAX---XXXXXXXXXXXXXXXXXXXXXXXXXVGDNNHASTGEGSASLGGTTARGLGGSLTLGGWGGGTPTLFYHRSVPGGAXXXXXXXXXXXAGNLGRVPMLGSRPLLVPKPTMAAHNGRLLMEHEWADAVFF 1067          
BLAST of mRNA_Ecto-sp13_S_contig8329.19691.1 vs. uniprot
Match: D7FK98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK98_ECTSI)

HSP 1 Score: 645 bits (1665), Expect = 6.840e-218
Identity = 506/753 (67.20%), Postives = 523/753 (69.46%), Query Frame = 0
Query:    1 MLALDTLKWSTLEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKNWNTQVLTFQFRKNLWSMAVCDMGEPPPDELNANQSSTSRGKRSSASPLRVTILDNPVIGRTEPSRGGSDEPKAAPAPPSSNNTNDERPQNEPLGEPGQQPKMKDPAPSSSLAGSLAPGGLKGNANNKNSNAAXXXXAATEHSATAMVAMMPHQRHGHTCFVWDPRQAALACNGGXXXXXXXXXXXXXXXXXARASPVSPMRGGQNRGNRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNNNTTALPLSRKGVGGXXXXXXXXXXXXXXXXXXXXXXSSPTDESLPNPCIVTFGGSALRTGGGYARAALHVLEAPAPEDGGRGNDDNDSDKDGGGRKCSSPSTGILASLELAADAPKQTFNKFQSCTNSVLLKVHSLRQLGNEQLTFGDSYNPEDLSYIDLKVQSVVLGVGDRNLQVGGRRGHTKGTTGWCLYSSNSCRSSDNVEDEQPHSTHGGLLVGFP------QVKAFLADARPANARIRPVSAPAHLVEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTHAASDSSRLARPNSRIATASGGRHLHXXXXXXXXXXXXXXXXXXXXXXVGDNNHASTGEGSASFGGTTDGGLGGSLTLGERDGDTPTLFYHRSVPGGAXXXXXXXXX--GNLGRVPMLGRRPLLVPKATMAAHNGRLLMEHEWADAGFFY 745
            MLALDTL+WSTLEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGK+WNTQVLTFQFRKNLWSMAVCDM EPPPDELNANQ+S +RGKRSSASPLRVTILDNPVIGRTEPSRGGSDEPKAAPAPPS NNT+DERPQ+EPLGEPGQQ K                                                    RHGHTCFVWDPRQAALACN G   XXXXXXXXXXXX  AR  PVSP RG QNRG+     XXXXXXXXXXXXXXXXXXXXXXXXX                  XXXXXXXXXXX          SSPTDESLP+PCIVTFGGSALRTGGGYARAALHVLE PAPED       NDSD DGGGRK SSPSTGILASLELAADAPKQTFNKFQS TNSVLLKVHSLRQLGNEQLTFGDSYNPEDLSYIDLKVQSVVLGVG R L+  G        T     ++   ++    + + PH    G L  FP      +VKAFLADARPANARIRPVSAPAHLVEPG                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         RLARPNSR+AT        XXXXXXXXXXXXXXXXXXXXXX                                    TPTLFYHRSVPGGA    XXXXX  GNLGRVPMLG RPLLVPK TMAAHNGRLLMEHEWADAGFFY
Sbjct:  256 MLALDTLQWSTLEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKSWNTQVLTFQFRKNLWSMAVCDMAEPPPDELNANQTSAARGKRSSASPLRVTILDNPVIGRTEPSRGGSDEPKAAPAPPSPNNTDDERPQHEPLGEPGQQAK----------------------------------------------------RHGHTCFVWDPRQAALACNDGGGGXXXXXXXXXXXXDGARGLPVSPKRGSQNRGSGRSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXRSRNRRTPTPSSPTDESLPHPCIVTFGGSALRTGGGYARAALHVLETPAPED-------NDSDNDGGGRKASSPSTGILASLELAADAPKQTFNKFQSFTNSVLLKVHSLRQLGNEQLTFGDSYNPEDLSYIDLKVQSVVLGVGGRTLEADGSDEDRNSKTSPAATTAGGSKAKTRADVKPPHPG-AGRLGSFPTGYEQARVKAFLADARPANARIRPVSAPAHLVEPGGGSGGILDKGRKAAGGRRWNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLARPNSRVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPTLFYHRSVPGGAPGGRXXXXXXAGNLGRVPMLGSRPLLVPKPTMAAHNGRLLMEHEWADAGFFY 945          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8329.19691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRA7_9PHAE3.290e-25572.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK98_ECTSI6.840e-21867.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 5..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8329contigEcto-sp13_S_contig8329:189..5971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8329.19691.1mRNA_Ecto-sp13_S_contig8329.19691.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8329 183..5971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8329.19691.1 ID=prot_Ecto-sp13_S_contig8329.19691.1|Name=mRNA_Ecto-sp13_S_contig8329.19691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=746bp
MLALDTLKWSTLEPHPLGFSAPAIHGHTAVEDPAHAGRLIIFGGRGGKNW
NTQVLTFQFRKNLWSMAVCDMGEPPPDELNANQSSTSRGKRSSASPLRVT
ILDNPVIGRTEPSRGGSDEPKAAPAPPSSNNTNDERPQNEPLGEPGQQPK
MKDPAPSSSLAGSLAPGGLKGNANNKNSNAAEAAKAATEHSATAMVAMMP
HQRHGHTCFVWDPRQAALACNGGGGGGGGAGAGGGGDGDGARASPVSPMR
GGQNRGNRDGSGSSGRSNGGVGGGAGRKSSPTRPLGGDNNNTTALPLSRK
GVGGGGSRSGGGGGGGRSRNRRTPTPSSPTDESLPNPCIVTFGGSALRTG
GGYARAALHVLEAPAPEDGGRGNDDNDSDKDGGGRKCSSPSTGILASLEL
AADAPKQTFNKFQSCTNSVLLKVHSLRQLGNEQLTFGDSYNPEDLSYIDL
KVQSVVLGVGDRNLQVGGRRGHTKGTTGWCLYSSNSCRSSDNVEDEQPHS
THGGLLVGFPQVKAFLADARPANARIRPVSAPAHLVEPGGGGGGGVLDKG
RKAAGGRRWNEHESRRRPGTAGAAIGSGARRGDHHERSSLPPMMPSTHAA
SDSSRLARPNSRIATASGGRHLHHQRVDGGGGDGGSSNSSTAGGGVGDNN
HASTGEGSASFGGTTDGGLGGSLTLGERDGDTPTLFYHRSVPGGAPGGRA
GGGAGNLGRVPMLGRRPLLVPKATMAAHNGRLLMEHEWADAGFFY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller