prot_Ecto-sp13_S_contig8294.19643.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8294.19643.1
Unique Nameprot_Ecto-sp13_S_contig8294.19643.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length117
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8294.19643.1 vs. uniprot
Match: D7FSQ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 2.170e-67
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0 
Query:    1 MVILETKNMGFIDGTLPVFDYSYWFPRGDDGDDDGSGDSDEDVPTRFEFHMPRPEDYIQFRVPPSTVTAVKLRFPSDRQFVFRVSYDEVETDEEVVEEFTSAGGPDTMETFTLSAPA 117
            MVILETK MGFI+GTLPVFDYSYWFPRGD GDDD SGDSDEDVPTRFEFHMPRPEDY QFRVPPSTVTAVKLRFPSDRQFVFRVSYDE+ETDEE+VEEFTSAGGPDTMETFTLSAPA
Sbjct:  494 MVILETKEMGFINGTLPVFDYSYWFPRGDGGDDDSSGDSDEDVPTRFEFHMPRPEDYFQFRVPPSTVTAVKLRFPSDRQFVFRVSYDEIETDEEIVEEFTSAGGPDTMETFTLSAPA 610
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BLAST of mRNA_Ecto-sp13_S_contig8294.19643.1 vs. uniprot
Match: A0A6H5JDS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS6_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 3.900e-27
Identity = 62/117 (52.99%), Postives = 77/117 (65.81%), Query Frame = 0 
Query:    1 MVILETKNMGFIDGTLPVFDYSYWFPRGDDGDDDGSGDSDEDVPTRFEFHMPRPEDYIQFRVPPSTVTAVKLRFPSDRQFVFRVSYDEVETDEEVVEEFTSAGGPDTMETFTLSAPA 117
            +V LE +   FI+GT+PVF         DD ++DG+   D D+PTRFEF +    +YI   VPPSTVTA+++RFP+DR FVF V YD +      VEEFTSAGGP T ETFTLS PA
Sbjct:  505 LVFLEKRKKDFIEGTIPVFSTRIRSTSNDDEEEDGA---DVDIPTRFEFDLQIEGNYIDMNVPPSTVTALRMRFPADRSFVFMVEYDGI------VEEFTSAGGPKTWETFTLSTPA 612
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BLAST of mRNA_Ecto-sp13_S_contig8294.19643.1 vs. uniprot
Match: D8LG22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG22_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 3.760e-22
Identity = 53/94 (56.38%), Postives = 65/94 (69.15%), Query Frame = 0 
Query:   24 WFPRGDDGDDDGSGDSDEDVPTRFEFHMPRPEDYIQFRVPPSTVTAVKLRFPSDRQFVFRVSYDEVETDEEVVEEFTSAGGPDTMETFTLSAPA 117
            W    DD +++G+   D D+PTRFEF +P   DYI   VPPSTVTA+++RFP+DR FVF V Y +V      VEEFTSAGGP T ETFTL+ PA
Sbjct:   28 WQSNSDDDEEEGA---DVDIPTRFEFDLPIEGDYIDMDVPPSTVTALRMRFPADRSFVFMVEYGDV------VEEFTSAGGPKTWETFTLATPA 112
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8294.19643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FSQ6_ECTSI2.170e-6794.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JDS6_9PHAE3.900e-2752.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG22_ECTSI3.760e-2256.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8294contigEcto-sp13_S_contig8294:1387..3345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8294.19643.1mRNA_Ecto-sp13_S_contig8294.19643.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8294 1087..3345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8294.19643.1 ID=prot_Ecto-sp13_S_contig8294.19643.1|Name=mRNA_Ecto-sp13_S_contig8294.19643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=117bp
MVILETKNMGFIDGTLPVFDYSYWFPRGDDGDDDGSGDSDEDVPTRFEFH
MPRPEDYIQFRVPPSTVTAVKLRFPSDRQFVFRVSYDEVETDEEVVEEFT
SAGGPDTMETFTLSAPA
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