prot_Ecto-sp13_S_contig8277.19622.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8277.19622.1
Unique Nameprot_Ecto-sp13_S_contig8277.19622.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length168
Homology
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 1.250e-102
Identity = 158/168 (94.05%), Postives = 164/168 (97.62%), Query Frame = 0
Query:    1 QVSIAKLFSYADGKDKLYMFVGIIAAAIHSCMMPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGL 168
            QVSIAKLFSYADG+DKLYMFVG+IAAAIHSCMMPLFIANFGSTLDELGEPV + DEKTVLESVASFCILFG+IG VAGVVGFVLV LWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDI+LNGLSGIALLVTG+IINWELGL
Sbjct:   27 QVSIAKLFSYADGRDKLYMFVGVIAAAIHSCMMPLFIANFGSTLDELGEPVRDSDEKTVLESVASFCILFGIIGLVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIVLNGLSGIALLVTGLIINWELGL 194          
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 1.250e-89
Identity = 152/168 (90.48%), Postives = 155/168 (92.26%), Query Frame = 0
Query:    1 QVSIAKLFSYADGKDKLYMFVGIIAAAIHSCMMPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGL 168
            QVSIAKLFSYADG+DKLYMFVGIIAAAIH+C           TLDELGEPVEE DEKT+LESV SFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGL
Sbjct:   27 QVSIAKLFSYADGRDKLYMFVGIIAAAIHAC-----------TLDELGEPVEEDDEKTILESVTSFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGL 183          
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: A0A6H5J5U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5U8_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 6.460e-80
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0
Query:   32 MMPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGL 168
            MMPLFIANFGSTLDELGEPV EGDE+T+ ESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL+TGIIINWELGL
Sbjct:    1 MMPLFIANFGSTLDELGEPVGEGDEQTISESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLITGIIINWELGL 137          
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: A0A6H5JGF0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF0_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 3.250e-78
Identity = 130/137 (94.89%), Postives = 132/137 (96.35%), Query Frame = 0
Query:   32 MMPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGL 168
            MMPLFIANFGSTLDELGEPVE+ D KTVLESVASFCIL GVIG VAGVVGFVLV LWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALL+TGIIINWELGL
Sbjct:  157 MMPLFIANFGSTLDELGEPVEDSDGKTVLESVASFCILLGVIGAVAGVVGFVLVALWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLITGIIINWELGL 293          
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 4.520e-73
Identity = 117/168 (69.64%), Postives = 142/168 (84.52%), Query Frame = 0
Query:    1 QVSIAKLFSYADGKDKLYMFVGIIAAAIHSCMMPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGL 168
            QV  +KLF++AD +D L+MF+G IAA + +C MPLF+  FG TLD LG+P E+G+  +V E+V  F +LFGVIG ++GV GF +V+LWSI+GE QALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGD ILNGL GIALL+T +++NW+LGL
Sbjct:   61 QVPFSKLFTFADQRDMLFMFIGTIAACVQACTMPLFMTTFGDTLDGLGQPTEDGEVSSVAETVQKFVVLFGVIGVLSGVSGFAMVSLWSIAGECQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDSILNGLGGIALLITAMVVNWQLGL 228          
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: A0A6H5JRQ1_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ1_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.510e-61
Identity = 100/136 (73.53%), Postives = 117/136 (86.03%), Query Frame = 0
Query:   33 MPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIINWELGL 168
            MPLF+  FG TLD LG+P E+G+  +V E+V  F +LFGVIG ++GV GF +V+LWSI+GE QALRMRREYVKCILKQDIGWFD HPAGQLPTAVTANMAKVQDGLGRKIGD ILNGL GIALL+T +++NW+LGL
Sbjct:    1 MPLFMTTFGDTLDGLGQPTEDGEVASVAEAVQKFVVLFGVIGALSGVSGFAMVSLWSIAGECQALRMRREYVKCILKQDIGWFDAHPAGQLPTAVTANMAKVQDGLGRKIGDSILNGLGGIALLITAMVVNWQLGL 136          
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA)

HSP 1 Score: 147 bits (370), Expect = 9.690e-38
Identity = 74/145 (51.03%), Postives = 96/145 (66.21%), Query Frame = 0
Query:   19 MFVGIIAAAIHSCMMPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIIN 163
            M +G  AA      MP FI  FG TLD L +     D KTV++    FC++F V+G VA V GF+ V  W+I+GERQALR++  YVK IL+QD+GWFDEHPAGQLP+ VT+ M KVQDG+GRKI D ++NG   +  L+    +N
Sbjct:    1 MLIGTAAACTSGAAMPYFIVYFGKTLDGLNDST---DIKTVVQG---FCLVFLVVGIVASVCGFIFVLCWTIAGERQALRLKEAYVKAILRQDVGWFDEHPAGQLPSMVTSLMGKVQDGIGRKIADSMMNGAGSMGCLIAAFYLN 139          
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA)

HSP 1 Score: 142 bits (357), Expect = 5.430e-36
Identity = 74/145 (51.03%), Postives = 93/145 (64.14%), Query Frame = 0
Query:   19 MFVGIIAAAIHSCMMPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIIN 163
            M +G+ AA +    MP FI  FG TLD L       D   VL  V+ FC +F V+G V+   GF  V  W++SGERQALR++  YVK IL+QDIGWFDEHPAGQLP+ VT+ M KVQDG+GRK+ D I+N  S I  L+    +N
Sbjct:    1 MAIGVAAALVSGAGMPYFIVYFGKTLDGLN------DNADVLGVVSGFCTVFLVVGAVSFAGGFTFVLCWTMSGERQALRLKEAYVKAILRQDIGWFDEHPAGQLPSMVTSLMGKVQDGIGRKVADAIMNCASAIGQLIAAFYLN 139          
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: A0A836CNL1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL1_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.070e-33
Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 0
Query:    1 QVSIAKLFSYADGKDKLYMFVGIIAAAIHSCMMPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQ---------------DIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLV 157
            +VS+ +LFS AD  D+  ++VG +AAA+     P F+  FG TLD L      GD +++   VA+F I+F ++G VA + GFV V  W+I+G+RQA RM+++YVK IL+                D+GWFDEHPAGQLPT VT  +A + DG+G KI   I+NG S I L +
Sbjct:   56 RVSLGQLFSLADSVDQGLVWVGSVAAAVTGAARPFFMIYFGKTLDGLNST---GDLRSI---VANFAIIFVIVGAVASITGFVAVYSWTIAGDRQATRMKQQYVKGILRXXXXXXXXXXXXXXXXDMGWFDEHPAGQLPTLVTNRLATIADGIGSKIPIAIMNGFSCIGLFI 221          
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Match: A0A662Y0T4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0T4_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.300e-25
Identity = 64/171 (37.43%), Postives = 94/171 (54.97%), Query Frame = 0
Query:    2 VSIAKLFSYADGKDKLYMFVGIIAAAIHSCMMPLFIANFGSTLDELGEPVEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMRREYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGLSGIALLVTGIIIN----WELGL 168
            VS+  L SYADG DKL M  G++ AA      P+ I   G  L++L          ++  S+    +++  +G  A V GF+ VT WS +  RQA R+R  YV+ IL ++IGWFD +   QL + V     K+Q+G+GRK+GD    GL   ++ V+GI+I     W+L L
Sbjct:  343 VSLKDLLSYADGSDKLLMAGGVVGAAAAGIAQPIQIVLLGDVLNDLNP---SDASASITSSINDVALIYVFVGLAATVAGFLQVTCWSTTASRQAKRIRSAYVRAILTKEIGWFDVNKPMQLASRVAETTVKIQEGMGRKVGD----GLHYFSMAVSGIVIGLVKGWDLTL 506          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8277.19622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHL5_ECTSI1.250e-10294.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHL4_ECTSI1.250e-8990.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J5U8_9PHAE6.460e-8096.35ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5JGF0_9PHAE3.250e-7894.89ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FHL1_ECTSI4.520e-7369.64ATP-binding cassette, sub-family B (MDR/TAP), memb... [more]
A0A6H5JRQ1_9PHAE1.510e-6173.53ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CGZ9_9STRA9.690e-3851.03ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A836CDG9_9STRA5.430e-3651.03ATP-binding cassette, sub-family B, member 1A n=1 ... [more]
A0A836CNL1_9STRA1.070e-3344.19P-loop containing nucleoside triphosphate hydrolas... [more]
A0A662Y0T4_9STRA2.300e-2537.43Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 19..168
e-value: 1.1E-26
score: 94.1
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 20..168
score: 20.164
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..168
e-value: 1.3E-43
score: 151.1
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 7..168
NoneNo IPR availablePANTHERPTHR24222FAMILY NOT NAMEDcoord: 3..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..16
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 68..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8277contigEcto-sp13_S_contig8277:3924..6303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8277.19622.1mRNA_Ecto-sp13_S_contig8277.19622.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8277 3924..6305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8277.19622.1 ID=prot_Ecto-sp13_S_contig8277.19622.1|Name=mRNA_Ecto-sp13_S_contig8277.19622.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp
QVSIAKLFSYADGKDKLYMFVGIIAAAIHSCMMPLFIANFGSTLDELGEP
VEEGDEKTVLESVASFCILFGVIGFVAGVVGFVLVTLWSISGERQALRMR
REYVKCILKQDIGWFDEHPAGQLPTAVTANMAKVQDGLGRKIGDIILNGL
SGIALLVTGIIINWELGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
IPR036640ABC1_TM_sf