prot_Ecto-sp13_S_contig825.19599.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig825.19599.1
Unique Nameprot_Ecto-sp13_S_contig825.19599.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length717
Homology
BLAST of mRNA_Ecto-sp13_S_contig825.19599.1 vs. uniprot
Match: D7FRG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG7_ECTSI)

HSP 1 Score: 685 bits (1768), Expect = 3.100e-238
Identity = 547/640 (85.47%), Postives = 554/640 (86.56%), Query Frame = 0
Query:   69 MDEDLTNRVVPGASKGQVAFQARGLDLNSTKVSTRAKPRGRRKAXXXXXXXXXLRAVKEGEEEAWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAERXXXXXXXXXXRVNAMAERESLQRDEEKQLMEVIKASLVEGPPAPPPP-TLDHRAEATPRALAGRQPASSQQTILHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQLAGWAVRGSTTCGAPGGADVMSPAPPVKKAAWGAAGQASDGLSAEERELKAVLEASRIAEETRQREDAESKIAMDMALKMSMMETSAAPSGGERYRHGRGNYYQQPAATTGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDPNARYSPVAAXXXXXXXPSVAPMAVSPRAPGAYSAASGPLTPRQQGGPSQVVPTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELAWVLEQSRLEVEVQKSLMAIAEEGEEEMXXXXXXXXXXXQEKRNAEQLEFQRVSPA 707
            MDEDLTNRVVPGASKGQVAFQARGL+LNS K S RAKPRGRRKAXXXXXXX  LR VKE +EEAWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAERXXXXXXXXXX   AMAERESLQRDEEKQLMEVIKASLVEGPPAP    TLDHR EATP AL GRQPASSQQ ILHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQLAGWAVRGS TCGAPGG  V+ PAPPV+KAAWGAAGQASDGLSAEERELKAVLEASRIAEETRQREDAESKIAMDMALKMSMMET AAPS GERY HGRGNYYQQPAATTGYPA                            RP PNA YSP+A        P VA  AVSPRAPGAYSAA  PL+PRQQG PSQVVPTRP        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DELAWVLEQSRLE E+QKS MAIAEEGEEE XXXXXXXXXXX EKRNAEQLEFQR   A
Sbjct:    1 MDEDLTNRVVPGASKGQVAFQARGLELNSNKASARAKPRGRRKAXXXXXXX--LRTVKEEKEEAWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAERXXXXXXXXXXXXXAMAERESLQRDEEKQLMEVIKASLVEGPPAPXXXXTLDHRTEATPGALTGRQPASSQQAILHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQLAGWAVRGSATCGAPGGGGVLPPAPPVQKAAWGAAGQASDGLSAEERELKAVLEASRIAEETRQREDAESKIAMDMALKMSMMETPAAPSSGERYGHGRGNYYQQPAATTGYPAQPPPLSTSATANGFRPKGGGWQGQQQPPRPAPNAGYSPMATAAAAAPPP-VASTAVSPRAPGAYSAAGRPLSPRQQGAPSQVVPTRPPPADGSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-DELAWVLEQSRLEAEIQKSRMAIAEEGEEEXXXXXXXXXXXXXEKRNAEQLEFQRAMQA 636          
BLAST of mRNA_Ecto-sp13_S_contig825.19599.1 vs. uniprot
Match: A0A6H5J997_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J997_9PHAE)

HSP 1 Score: 612 bits (1578), Expect = 3.470e-196
Identity = 465/971 (47.89%), Postives = 476/971 (49.02%), Query Frame = 0
Query:   20 GRG---VCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTWKTTPKNKEMDEDLTNRVVPGASKGQVAFQARGLDLNSTKVSTRAKPRGRRKAXXXXXXXXXLRAVKEGEEEAWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAERXXXXXXXXXXRVNAMAERESLQRDEEKQLMEVIKASLVEG--------------------------------------------------------------PP---------------------------------------------------------------------------------------------------------APP-------------------------------------------------------------------------------PP---------------------------------TLDHRAEATPRALAGRQPASSQQTIL-HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQLAGWAVRGSTTCGAPGGADVMSPAPPVKKAAWGAAGQASDGLSAEERELKAVLEASRIAEETRQREDAESKIAMDMALKMSMMETSAAPSGGERYRHGRGNYYQQPAATTGYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDPNARYSPVAAXXXXXXXPSVAPMAVSPRAPGAYSAASGPLTPRQQGGPSQVVPTRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELAWVLEQSRLEVEVQKSLMAIAEEGEEEMXXXXXXXXXXXQEKRNAEQLEFQRVSPA 707
            GRG   VCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTWKTTPKNKE+DEDLT RVVPGAS+GQVAFQARGLDLNS K S  AKPRGRR  XXXXXXXXX           WEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAER          RV AMAE ESLQRDEEKQLMEVIKASLVE                                                               PP                                                                                                          PP                                                                               PP                                 TLDHRAEATP ALAGRQPASSQQTIL H                             XXXXXXXXXXXXXXXXXX AQLAGWAVRGS TCGAPGG  V+ PAPPV+KAAWGAAGQASDGLSAEEREL+AVLEASRI EETR+RE+AESKIAMDMALKMSMME SAAPSGGERY H RGNYYQQPAATTGYP                          XXX P PNA YSP+AA       P VAPMAV                 RQQG PSQV+PTRP                                                                    DELAWVLEQSRLE E+Q S M IAE+GEEEM           QEKRNAEQLEFQR   A
Sbjct:  851 GRGGVSVCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTWKTTPKNKEVDEDLTKRVVPGASRGQVAFQARGLDLNSNKASALAKPRGRRHGXXXXXXXXXXXXXXXX---XWEAASRKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAEREKRREAHAKARVKAMAECESLQRDEEKQLMEVIKASLVESLGAGEKDDRDVIAALEASKRDSEYNAREEGEDADVLKVMVESRRQHEAMQELRRVHGDMSSVPPHSQSAAETATTAVSYAGDQTNHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVPMAPDWLVSELPVAAPAGAAGFMQAPRQGYQGQAYSAGMNQGHTATPPTXXXXXXXXXXXXXXXXXXXAVYAPHATGDCGGVHMETTHPGLEPTNSQHAYSVQEQQXXXXXQPMRIPARFDDGNLAMPPXXXATAPVGVPTSPSVQGPXXXXXXXXXXXXXXTLDHRAEATPCALAGRQPASSQQTILCHGTTPLLTAQQQPWPQGSGAELSGYMMMNGXXXXXXXXXXXXXXXXXXXAQLAGWAVRGSATCGAPGGGGVLPPAPPVRKAAWGAAGQASDGLSAEERELEAVLEASRIEEETRRREEAESKIAMDMALKMSMMEASAAPSGGERYGHDRGNYYQQPAATTGYPTQPPPLSVLAAANGFRPNEGGRQRQQXXXHPAPNASYSPMAASASAAAPPPVAPMAVXXXXXXXXXXXXXXXXXRQQGAPSQVLPTRPPPANGSVGDGGGESAEGDREEDEAARELRIALEEEEQYYEAKDAAGRTGGPSPPSKAGASTGRGGQQEDELAWVLEQSRLEAEIQVSRMVIAEKGEEEMMDKVLEESRLEQEKRNAEQLEFQRAMQA 1818          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig825.19599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRG7_ECTSI3.100e-23885.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J997_9PHAE3.470e-19647.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 682..702
NoneNo IPR availableCOILSCoilCoilcoord: 253..273
IPR003903Ubiquitin interacting motifSMARTSM00726uimcoord: 279..298
e-value: 470.0
score: 3.7
coord: 646..665
e-value: 110.0
score: 8.6
coord: 225..244
e-value: 270.0
score: 5.6
coord: 675..694
e-value: 20.0
score: 14.1
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 675..694
score: 9.689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig825contigEcto-sp13_S_contig825:6389..13742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig825.19599.1mRNA_Ecto-sp13_S_contig825.19599.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig825 6389..13742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig825.19599.1 ID=prot_Ecto-sp13_S_contig825.19599.1|Name=mRNA_Ecto-sp13_S_contig825.19599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=717bp
GDEGGWDGQGRIEEAQIVSGRGVCRKLGQGEVGYVATTHTMSGVYRKWDC
QRRNPVDTTWKTTPKNKEMDEDLTNRVVPGASKGQVAFQARGLDLNSTKV
STRAKPRGRRKAGGGGGGGGGLRAVKEGEEEAWEAASRKRRGQKETRVAP
HSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLE
PSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYG
TEAERERRREAQAKARVNAMAERESLQRDEEKQLMEVIKASLVEGPPAPP
PPTLDHRAEATPRALAGRQPASSQQTILHHGTPPLTAQQQPWPQGGGAEL
AGHTMMNGAPPPPDDNKRDGLAAAGGAAQLAGWAVRGSTTCGAPGGADVM
SPAPPVKKAAWGAAGQASDGLSAEERELKAVLEASRIAEETRQREDAESK
IAMDMALKMSMMETSAAPSGGERYRHGRGNYYQQPAATTGYPAQPPPPSA
PAAANGFRPNGGGRHGQQPPPRPDPNARYSPVAAAAAAAAPPSVAPMAVS
PRAPGAYSAASGPLTPRQQGGPSQVVPTRPPPADGSVGGGGGESAEGDGE
EDEAARELRIALEEEEQYYGAKDSAGKTGGQSPPSKAGASTGGGGQQEDE
LAWVLEQSRLEVEVQKSLMAIAEEGEEEMMAKVLEESRLEQEKRNAEQLE
FQRVSPAGGVAYRSSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003903UIM_dom