mRNA_Ecto-sp13_S_contig8249.19598.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8249.19598.1
Unique NamemRNA_Ecto-sp13_S_contig8249.19598.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: D7FWI2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWI2_ECTSI)

HSP 1 Score: 664 bits (1713), Expect = 7.790e-233
Identity = 486/563 (86.32%), Postives = 495/563 (87.92%), Query Frame = 1 
Query:    1 MAKTTRRDRHKKAIVSGAAQARGVSKVMEKERTVSTSSSGGSNHKRPAAAGLVGKGGKELAKRPAAREQRGGRNDSQSASTGRDADGRKXXXXXXXXXXXXXXXXXEGGRQSVEDELVATIQEHDEFFSRMLDMIPEHLVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKAVEDGGDADAGSNKDNDDXXDESDGGLQAAAEQDGLQSEVLRGKSMDVASMDALKKRIEERIKVFQEKRTAAEGSRRAKTAXXXXXXXXXXXXXXRKGAKXXXXXXXXXXXXXXXXXXXXXXXKGSAEAXXXXXXXXXXXAKVEANGSHAPVAKPQLPPLPTVEDVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAAGGDAASGQDAKRQRRAGFEGKKQDFINKERPSKAGERGGGGGRGGARGGRGRGG 1689
            M K+TRRDR KKAI SGAAQARGVSKVM KERT STS              LVGKGGKEL K                           XXXXXXXXXXXXXXXXX GGR+SVEDELVATIQEHDEFFSRMLDMIPE+LVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKA EDGGDADAGS+KD   XX    GGLQAAAEQDGLQSEVLRGKSMDVASMDALKKRIEERIKVFQEKRTAAEGSRRAKTAXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXX  SAEAXXXXXXXXXX AKVEANGSHAPVAKPQLPPLPTVEDVGDIEFSGLRGV+GDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTE GKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWD+RLSGQR XXXXXXXXXEENLNRRKKGGPAVG+TDKAA+GGDAASGQ  KRQRRAGFEGKKQDFINKERPSKAGE+GGGGGRGGARGGRGRGG
Sbjct:    1 MTKSTRRDRRKKAIASGAAQARGVSKVMTKERTASTSXXXXXXXXXXXXXXLVGKGGKELVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRESVEDELVATIQEHDEFFSRMLDMIPENLVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKAGEDGGDADAGSDKDXXXXXXXXXGGLQAAAEQDGLQSEVLRGKSMDVASMDALKKRIEERIKVFQEKRTAAEGSRRAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEAXXXXXXXXXXGAKVEANGSHAPVAKPQLPPLPTVEDVGDIEFSGLRGVLGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTETGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDERLSGQRKXXXXXXXXXEENLNRRKKGGPAVGETDKAASGGDAASGQGGKRQRRAGFEGKKQDFINKERPSKAGEQGGGGGRGGARGGRGRGG 563
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A1E7FHH0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHH0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.240e-15
Identity = 70/186 (37.63%), Postives = 95/186 (51.08%), Query Frame = 1 
Query: 1084 DVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT--EEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAA--------GGDAASGQDAKRQRRAGFEGKKQDFINK 1611
            D+  ++F  L G+   G+GN  +  + K     SK K L  LLA AE KKQRL  L+++   E KEKA    W + I+ A G  +KD+PA +KK+++RK  +K KSA  W  R+   +            NLN+RK GG    +              GG      D +R  RAGFEGKKQDF+NK
Sbjct:  226 DLSQVDFGRLAGLNPIGNGNYTE--VNKALKNLSKSKNLEKLLADAESKKQRLEELKKSGKAEDKEKADNIVWGNVIKEATGERVKDDPAKIKKVLQRKAAKKKKSAKAWKNRMDTTKQNMDERQNIRNHNLNQRKAGGQTGANLSSKRIELEGDDKNGGPTKQKNDGRRLSRAGFEGKKQDFLNK 409
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A448ZTA8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTA8_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.040e-15
Identity = 70/186 (37.63%), Postives = 98/186 (52.69%), Query Frame = 1 
Query: 1084 DVGDIEFSGLRGV--VGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTE--EGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTD------KAAAGGDAASGQDAKRQRRAGFEGKKQDFINK 1611
            D+  ++F  L G+  VG+G+       L  +    SK K L  +LA AE KK+RL  L+Q++  E KEKA    W D +R A G  +KD+PA +KK +KR+  +K KS+  W  R+   +            NL +RK GG A  +        +A A G   +G+   R  RAGFEGKKQDF+NK
Sbjct:  172 DLAMVDFGRLSGLNPVGNGNYTEVNKALKNL----SKSKNLEKMLADAESKKKRLEELKQSDKQEDKEKAASIEWGDTLREATGERVKDDPAKIKKALKRRAAKKLKSSKAWKTRMESAQSKMDERQKIRNHNLTKRKLGGSAGANLSSKRIETEAEADGKKKTGR---RLSRAGFEGKKQDFLNK 350
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A1Z5JT82_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT82_FISSO)

HSP 1 Score: 85.9 bits (211), Expect = 2.170e-14
Identity = 76/191 (39.79%), Postives = 102/191 (53.40%), Query Frame = 1 
Query: 1081 EDVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPG--SKMKRLHGLLAAAEEKKQRLAGLRQ-TEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVG---DTDKAAAGGDAASGQDAKRQRRAGFEGKKQDFINKERPSKAGE 1635
            ED+  ++F  L G+    + N     L    A G  SK K L  +LA AE K+Q+L  L++ TEE K KA E  W+D ++ A G  +K +P+ +KK++KRK  +KAKS   W  RL   +            NL+ RKKGG A+G      K    GD  SG   KR  RAGFEGKK+DF+N   P K G+
Sbjct:  191 EDLAKLDFGRLAGLNTTETSNY----LAANKALGNLSKTKNLKKMLADAEAKQQKLEQLKKGTEEEKAKAMEMQWSDTLKEADGQRVKSDPSKIKKVLKRKAAKKAKSQKAWKTRLEQVKEKKDERQTIRNHNLDARKKGG-AIGANLSKKKIVKDGDQDSG---KRLSRAGFEGKKRDFLNS--PKKKGQ 371
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A7S4ATI7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATI7_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.200e-13
Identity = 67/186 (36.02%), Postives = 97/186 (52.15%), Query Frame = 1 
Query: 1084 DVGDIEFSGLRGV--VGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTEE--GKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAA-----GGDAASGQDAKRQRRAGFEGKKQDFINKE 1614
            D+  ++F  L G+  VG+G+       L  +    SK K L  +LA AE KK+RL  L+++++   KEKA    W  A++ A G  +KD+PA +KK +KRK  +K KS+  W  R+   +            NL++RK GG A  +           G D   G   +R  RAGFEGKKQDF+NK+
Sbjct:  264 DLAQVDFGRLAGLNPVGNGNYTEVNKALKNL----SKSKNLEKMLADAESKKKRLEELKKSDKQTDKEKAANIEWGHALKEATGERVKDDPAKIKKALKRKAAKKLKSSKAWKTRIESTQSKMDERQKIRNHNLSKRKVGGSAGANLSSKRIEVEKEGDDKKKG--GRRLSRAGFEGKKQDFLNKK 443
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A7S4UJP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UJP3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.600e-13
Identity = 73/200 (36.50%), Postives = 99/200 (49.50%), Query Frame = 1 
Query: 1066 PLPTVEDVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPA---------VGDTDKAAAGGDAASGQDAKRQRR---------AGFEGKKQDFIN 1608
            P    +D+  I+F G+ G+         K  L  V    +K K L  LL  AE+K+QRL  L+Q  EE K KA +  W  A++ A G +++++PA +KK +KRK K+K KSA  W  R    R            N+N+RK+GG A         V D DK          +D K++RR         AGFEGKKQDFIN
Sbjct:  245 PATVKDDMDGIDFGGISGLATKKHYEDNKS-LSNV----NKKKSLERLLEEAEKKQQRLKALKQGDEEDKAKAAKIEWGIALKEASGEKVRNDPAMIKKAMKRKAKKKVKSAEAWKARTDQLRDKIDERQKIRTHNINQRKQGGMAGANLSKKRIVEDEDKKT--------EDGKKKRRLGPHAEKSRAGFEGKKQDFIN 431
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: B5Y420_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y420_PHATC)

HSP 1 Score: 80.9 bits (198), Expect = 1.290e-12
Identity = 65/185 (35.14%), Postives = 98/185 (52.97%), Query Frame = 1 
Query: 1084 DVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLR--QTEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAAGGDAASGQDA-KRQRRAGFEGKKQDFINKERPSKA 1629
            D+ +++F  L G+      +  K    K  A  SK K L  +LA AE K++R+  L+  + E  + +A++  W D ++ A G  +KD+P  LKK +KRKE +KAKS   W  R+              + NL+ RK GG +  +  K      A +G+D  +R  RAGFEG+KQDF+NK   +KA
Sbjct:  218 DLANLDFGRLAGLNSHTKEHYSKSN--KALANLSKTKNLERMLADAEAKRERIEALKACKDESAQAEARQILWKDTLQEADGQRVKDDPMKLKKALKRKEVKKAKSKKAWKSRMENVSDAAQSRQKIRQHNLSARKAGGQSGANLSKKKI---ADAGEDGGRRLSRAGFEGRKQDFLNKGPAAKA 397
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: K8YSR8_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSR8_NANGC)

HSP 1 Score: 80.1 bits (196), Expect = 3.490e-12
Identity = 62/143 (43.36%), Postives = 76/143 (53.15%), Query Frame = 1 
Query: 1192 KRLHGLLAAAEEKKQRLAGLRQTEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAAGGDAASGQDAK---RQRRAGFEGKKQDFINK 1611
            K L GLL  AEEK++RL  L+ TE GKE+A    W DA++ A G +I DNP  LKK IK+KEK    S  KW  R +             E NL +RK GG      +   AG  A      K   RQ RAGFEGK+ +F+NK
Sbjct:  328 KNLVGLLKKAEEKEKRLKELQATEGGKEEASALLWKDALKSAHGEKILDNPKLLKKAIKKKEKAXXXSKEKWGDRTAKIEAAEREKQGRREANLKKRKLGG-----VEGCLAGSKAEKDNKEKSGGRQGRAGFEGKRAEFLNK 465
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A7S3KW68_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW68_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.620e-12
Identity = 64/182 (35.16%), Postives = 94/182 (51.65%), Query Frame = 1 
Query: 1084 DVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGDTDKAAAGGDAASGQDAKRQRRAGFEGKKQDFINKERPSK 1626
            D+  ++F  L G+ G  S  +      K     SK K LH +LA AE K+ +L  L+Q  EE   KA++  W+D  + A G  IKD+P+ LKK++KRK  +K KS   W  R +             + NL  RK+GG A  +  K     D   G+   R  RAGFEG+K++F+N ++ +K
Sbjct:  192 DLAQVDFGRLAGLNGS-SLQKNYEQSNKALQNLSKSKNLHKMLADAEAKRAKLEELKQGDEEAVAKAQKLLWSDTFKEADGQRIKDDPSKLKKVLKRKAAKKVKSQKAWQSRTAQVDKKAQDRQKIRQHNLQARKQGGAAGANLSKKEIRKDEDPGR---RLSRAGFEGRKREFLNGDKKTK 369
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BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Match: A0A7S2VZU1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZU1_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.420e-11
Identity = 59/148 (39.86%), Postives = 81/148 (54.73%), Query Frame = 1 
Query: 1207 LLAAAEEKKQRLAGLRQ-TEEGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDKRLSGQRXXXXXXXXXXEENLNRRKKGGPAVGD--TDKAAAGGDA---ASGQDAKRQR--------RAGFEGKKQDFIN 1608
            LLA A++KK RL  L+  T+E KEKAK   W D ++ A G +   +P+ LKK IKR+ K+K KS   W  R+   +            N+++RK GG A+G   ++K     +A   A+G   KR R        RAGFEGKKQ+FIN
Sbjct:    3 LLALAQKKKDRLKELKAGTDEDKEKAKRIDWGDTLKAATGEKTNSDPSLLKKAIKRRAKQKTKSGEAWKVRIDSVKDKMDERQKIRSHNIDKRKLGG-AIGANLSNKRIEESEAEKEAAGDGKKRARLGPHSTKGRAGFEGKKQEFIN 149
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8249.19598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FWI2_ECTSI7.790e-23386.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1E7FHH0_9STRA1.240e-1537.63Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A448ZTA8_9STRA4.040e-1537.63Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5JT82_FISSO2.170e-1439.79Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S4ATI7_9STRA1.200e-1336.02Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4UJP3_9STRA1.600e-1336.50Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
B5Y420_PHATC1.290e-1235.14Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
K8YSR8_NANGC3.490e-1243.36Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3KW68_9STRA5.620e-1235.16Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2VZU1_9STRA1.420e-1139.86Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8249contigEcto-sp13_S_contig8249:1308..6080 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score677.9
Seed ortholog evalue4.1e-192
Seed eggNOG ortholog2880.D7FWI2
Preferred nameSURF6
Model size1755
KEGG koko:K10848
KEGG Pathwayko03420,ko03460,map03420,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0001652,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044452,GO:0044464,GO:0065003,GO:0070013,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1990904
Exons7
EggNOG free text desc.ribosomal large subunit biogenesis
EggNOG OGsKOG2885@1,KOG2885@2759
Ec32 ortholog descriptionRibosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain
Ec32 orthologEc-26_006520.1
Cds size1755
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8249.19598.1prot_Ecto-sp13_S_contig8249.19598.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8249 1308..6080 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464094.8010921-CDS-Ecto-sp13_S_contig8249:1307..15021681464094.8010921-CDS-Ecto-sp13_S_contig8249:1307..1502Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8249 1308..1502 -
1681464094.8192136-CDS-Ecto-sp13_S_contig8249:1883..23421681464094.8192136-CDS-Ecto-sp13_S_contig8249:1883..2342Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8249 1884..2342 -
1681464094.8383079-CDS-Ecto-sp13_S_contig8249:2752..28771681464094.8383079-CDS-Ecto-sp13_S_contig8249:2752..2877Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8249 2753..2877 -
1681464094.8565266-CDS-Ecto-sp13_S_contig8249:3413..36211681464094.8565266-CDS-Ecto-sp13_S_contig8249:3413..3621Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8249 3414..3621 -
1681464094.8737566-CDS-Ecto-sp13_S_contig8249:4360..45491681464094.8737566-CDS-Ecto-sp13_S_contig8249:4360..4549Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8249 4361..4549 -
1681464094.8860943-CDS-Ecto-sp13_S_contig8249:5005..51131681464094.8860943-CDS-Ecto-sp13_S_contig8249:5005..5113Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8249 5006..5113 -
1681464094.8962471-CDS-Ecto-sp13_S_contig8249:5609..60801681464094.8962471-CDS-Ecto-sp13_S_contig8249:5609..6080Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8249 5610..6080 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8249.19598.1

>prot_Ecto-sp13_S_contig8249.19598.1 ID=prot_Ecto-sp13_S_contig8249.19598.1|Name=mRNA_Ecto-sp13_S_contig8249.19598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=585bp
MAKTTRRDRHKKAIVSGAAQARGVSKVMEKERTVSTSSSGGSNHKRPAAA
GLVGKGGKELAKRPAAREQRGGRNDSQSASTGRDADGRKKKRPRSQVEED
EEEEREEGGRQSVEDELVATIQEHDEFFSRMLDMIPEHLVLRAKEVAESS
YASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKAVE
DGGDADAGSNKDNDDDGDESDGGLQAAAEQDGLQSEVLRGKSMDVASMDA
LKKRIEERIKVFQEKRTAAEGSRRAKTAAKRSAKTATKRENKRKGAKARK
KGREGAIAAVAATGGAAGGAKGSAEAANGAGEGKAKGAKVEANGSHAPVA
KPQLPPLPTVEDVGDIEFSGLRGVVGDGSGNRGKHGLPKVGAPGSKMKRL
HGLLAAAEEKKQRLAGLRQTEEGKEKAKEEGWADAIRVAGGAEIKDNPAA
LKKMIKRKEKEKAKSAAKWDKRLSGQRKEQAKRQDKREENLNRRKKGGPA
VGDTDKAAAGGDAASGQDAKRQRRAGFEGKKQDFINKERPSKAGERGGGG
GRGGARGGRGRGGGGRDGGRGRGGGRGGGGRGRG*
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mRNA from alignment at Ecto-sp13_S_contig8249:1308..6080-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8249.19598.1 ID=mRNA_Ecto-sp13_S_contig8249.19598.1|Name=mRNA_Ecto-sp13_S_contig8249.19598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4773bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8249:1308..6080- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAAAAACTACCAGACGCGACCGCCACAAGAAGGCCATTGTCTCCGG
GGCTGCGCAGGCTCGAGGTGTGTCCAAGGTCATGGAAAAGGAACGAACGG
TCTCAACTTCATCATCCGGGGGTTCAAACCACAAGCGACCAGCAGCAGCA
GGGCTAGTTGGGAAGGGTGGCAAGGAGCTTGCCAAGCGTCCCGCTGCGCG
CGAGCAGCGGGGCGGCAGGAATGATAGCCAGAGCGCTTCTACTGGAAGGG
ATGCGGATGGGAGAAAAAAGAAGCGGCCACGAAGCCAGGTCGAAGAGGAT
GAAGAAGAGGAGAGAGAGGAGGGAGGTCGTCAATCCGTGGAGGACGAGCT
TGTGGCCACCATTCAGGAACATGACGAGTTTTTCTCGAGGATGCTGGACA
TGATTCCGGAGCACCTGGTGCTCCGCGCGAAGGAGGTCGCGGAGTCTTCA
TACGCCAGCAAGTACATGAAGGTGACTAGTGGGAAAATGCCCTTAACAAG
CATGGTCTAATACAATGACTAGTCCATGTGCTGTACGAGTCTAAAAATAT
ATGGTGCTTGACAGCTACCCTTGTCGCTTCCTTCGCTCCTGTGATATGCC
ACGACGTTCCCGGGATCACAGAATATCGGACGTACCCCGTGCGTCTCTTG
AAGCACCACCAACGCCGCGTACTTCGGCGTGTTTCGGTCCCCTCTCTTGG
TTTGTTCGTTGCCAGCGTTCGGCCGACTACACGTAATCGCCCCATAGCCA
CCTGCCGTGCCCAAGGCTACTGCGGTTTGATTTCTGTTCAGCTGGTACCT
TAGCTTGAGCCATTGCTGCTGCTGTAGGCGGCGTGACCGCCAACCCGCCC
TTCGCTGAACACGTCCTGTTTCTTGCGTGAGACACCCTTAGCAAAGGTCT
TCCTTGCTAATACGCGCGCCCTCGTACCTTAACCCCCTGTGTATGCATTC
AATCGATCGATCAACAGAACAAGAAGGGCGAGGCGCCGAAGCAATCGAAG
AAGGAGGAATCCAAGAAGAACAAACGGGCCCGCTACGCCGCCGACAACCA
GAAGACACTCCTGGAGAAGCAGCAGGTGCATATCATACGGAGAGCCTCTT
GTACTGCTGTACTTAAATATTGTGTCTTTATTTGTTGCAGCACTCGACCC
AGATAAGCCTGTGGTTTTGCTCAATTTGCTTACCTGGGCGTATGAAGTCA
CTCACGAATGTATTCACACGAAAATAGTAGAGGGTGTTGACGAAAATTGC
GTGTCGCCGATTTCCCCGTTGGACCGGGTTCGGTGTGTATTTCGAATGTT
TCTCTGAGTTGTGTCTCTTGGAACACGCCGTAGGCATCATTGCTGCACCA
GGCCCTTTCTTAGCTGCCATTGTTGCCCGTTTGCGGGCCCCGCTCTCTTG
TCACGTCCTCAAAGCCATGCTCCGTACACGATTGGCGGCTGTTCTTGTTA
CGCTGCCCACTTGCTTTTCACCACGAGACCGTGTCATTTTCTCCTTGTGC
TTTCCTTTTGTGTCCCGTCCATCCGCTAAAGGAGCGCGCCAAGGCCGTCG
AGGATGGGGGCGATGCTGACGCTGGTAGCAACAAAGACAACGATGATGAC
GGCGACGAGAGTGACGGGGGCCTACAGGCGGCCGCGGAGCAGGACGGGCT
CCAGAGCGAGGTGCTCAGGGGCAAGAGTATGGACGTGGCGTCCATGGATG
CCCTCAAGAAGCGGATAGAGGTGAGAGGGTGCAGCAGTAGAACATGTAGC
ACACTATCTACATGCTTAGGCAAAACACTGTGAAGGTTGCACTCCGTGTT
TGTACACCAACCTTGCCCGCAAACTTATCCAGTCATATCTATGAGCGAGC
ACCTTGTGCCTGGCGAAACGGGGGAATGATGCAGCTTGAACAACCCTCCC
CTCTCTGTTTGTGAGGTTGAAGGACGTATCCGGGCGTGTGTTTTGAGTGC
TGCGTTTTATACGACGGAAGGGTGTGCCCGGTGCCCTTCGCCGTCAAGAG
CGCTTGCCGGCCGCAGCTATGGATACATGTCTGACTGCCATACTACCCAC
GGCGTAGGTGGCGACGTGCCCCACCAATCAACGCACCCCTTCCTTCCTGT
GGTACCTAATTTATCGATTGTGGACGCAAGTGGAGTGATTCCTAGCTCGT
TCATTGCACACATTCTCGCACGGTCACGGGCGAGATAGAGGAGAGACAGA
GAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAAAGCCTGTGGTATAACC
TAGTCGAGCTAGCGCCTTTCGGTTCCCCAGACAACTTGACGATCTTTGTG
TCAAACAACCTCCGGAGCATGTAGAAAACCTGGTTGCAGGCTCAAGCACA
CGAGCCCACGTTCACCTCTAACCAACGGAAAACCGCTCGCCCGAATGAAC
ATCTCGTCTGTTGTCCCCCCCCCCCGCTTGATACTTGCTGTTGGTGGCAA
CGCTCACAGGAGCGCATCAAGGTCTTCCAGGAGAAGCGAACCGCCGCAGA
GGGAAGCCGTCGAGCGAAAACCGCCGCTAAGAGGAGCGCAAAGACGGCAA
CGAAGCGGGAGAACAAGCGCAAGGGCGCCAAGGCCAGGAAGAAGGGGAGG
GAAGGGGCGATTGCCGCGGTAGCGGCAACGGGGGGAGCGGCGGGTGGAGC
CAAGGGGTCCGCAGAAGGTGAGGAAGACTGACCAGCGGTGTGCACGTGTG
TTTTCATTAGGAAGGAGGCGAGAGAGACAAGGCGAAACCGAGCAAGAAAA
AACAATGGAGTGGAGAGGGCCGCGCAGTATTGCCCCCGTTTCTGGTTGCT
GCTGGATTGTGCTTGGGCTCCGTCTGCCATAAATCCGCTTTTTTTTCGGG
GTGACACTCTCTATGGTTAGTGGTTTCGTTTGTCACGGCGTGTACATGTC
TTTGGAGGCCGGTCGAGGCAAGAAACGGTCACGAAGAGGGGACTTTCCCA
AGTTTAAGTTTGTCATCCAACGTGACTGTCTTTCGTTTTGTGCAGTCAAC
GCATGATCGCATCAGAGTTCTGACGGCACACGCCTTTCCCACAACCAGAC
TCCGGGCTGGGCGACTCAAAACAAAAATGCCAGCAACAAACATGGACAAT
GAATTCATTCGCCGCATTCATTTGGTGAATGCTTTGTTGCTTCGCGAATG
CCATGCTAAGTATTATTCCTCTCTTTCATCGCCTCAAACGTACTACCTGA
CAGCCGCAAACGGGGCCGGTGAAGGGAAGGCCAAGGGGGCCAAGGTAGAA
GCCAATGGCTCGCATGCACCCGTTGCAAAGCCGCAGCTTCCCCCTCTGCC
GACCGTGGAAGATGTAGGAGACATCGAGGTAAGATCATCTGCATGTTGCG
GCCGCAGAACCCTGGGGGCGTTAATCAAGCGTGACTCAAATTTGAGGAGG
GATAGCCCAGATCATTTTGCCAGGGTACACTAGTAGTGCTCGCGGTCGCA
AACGGTGGCCTACCTACCGTTAATTAATCATGGCTCAAGCTTACTGTTCA
GGATCGTAGATCATTGTGCCGTCCAGGGTTGCCACCGAAGTAACACTCAC
AGTTGCAAAATGTGGCGGTCCTACTATACCTGCAGATTCAATTTTACGCT
GCCTGTCTCATTCCTTGTGCACAAATGGATCGTGCTCTCTCTTCCTCCCC
CCCCCGGAACCACGCACACATGCATTCTACCTTTTTTTTTCTGAAACGAA
ATGCATGAAACTGGAACGATGACGGGGGGCACGAGCAGTTCTCCGGGCTG
CGGGGAGTCGTTGGCGACGGCAGCGGCAACCGCGGAAAGCACGGTTTGCC
CAAGGTGGGCGCTCCGGGCAGCAAGATGAAGCGCCTGCACGGCCTGCTGG
CTGCCGCGGAGGAGAAGAAGCAGCGGCTTGCGGGACTCCGTCAAACGGAG
GAGGGCAAAGAGAAGGCTAAGGAGGAGGGGTGGGCGGACGCTATCCGCGT
GGCCGGAGGGGCCGAGATCAAGGACAACCCGGCTGCCCTGAAGAAGATGA
TCAAGCGCAAGGAGAAGGAGAAGGCGAAGAGCGCCGCCAAGTGGGACAAG
AGGTTGTCGGGGCAGAGGAAAGAGCAGGCCAAGAGGCAGGATAAGCGTGA
GGAGAACCTCAACAGGAGGAAGAAGGGAGGCCCCGCGGTGGGGGATACCG
ACAAGGCGGCAGCGGGGGGGGATGCCGCTTCGGGTCAAGACGCGAAGGTC
AGAAAGAGACGGTCGTAAGAGGCTGAATCGTTGGCTGGCACCTCCCGTGT
TGATTGGGCGTGCGATGTGTGATTTAGGCATAGTGAATGCAGCCCGTGCA
ACTGGAACAAGGTTGGCGCCTTATGTCCTCACCAACCAGACGAGCGGTTG
AAAGGGTTTGTATCGTACTGTTCATAGGAAGATAGACTCGATACCCTCGG
CGTTGTGGACAAGGATGGCTTCCAATGTTGTCCTCAGGGATGCGGCAAGG
GTATGTGCGCCGTTGTCTATCATATGGTATTCCGTGTTCCGCACCATATT
TTCGCGGTTAACACGAGCTCGATCGGTAACCCACGGCTCCCTCCACGTGT
GCGGCGACATCATTGTTGACTTACACAGCGCCAGAGGCGCGCTGGCTTTG
AGGGTAAGAAGCAGGACTTTATCAACAAAGAGAGGCCCAGCAAGGCCGGC
GAGCGAGGGGGAGGCGGAGGGCGCGGAGGCGCTAGGGGGGGGCGGGGACG
GGGTGGGGGCGGCAGGGATGGCGGCCGGGGGCGCGGCGGGGGTAGGGGCG
GTGGTGGCAGGGGGCGAGGGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8249:1308..6080-

>mRNA_Ecto-sp13_S_contig8249.19598.1 ID=mRNA_Ecto-sp13_S_contig8249.19598.1|Name=mRNA_Ecto-sp13_S_contig8249.19598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1755bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8249:1308..6080- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAAAAACTACCAGACGCGACCGCCACAAGAAGGCCATTGTCTCCGG
GGCTGCGCAGGCTCGAGGTGTGTCCAAGGTCATGGAAAAGGAACGAACGG
TCTCAACTTCATCATCCGGGGGTTCAAACCACAAGCGACCAGCAGCAGCA
GGGCTAGTTGGGAAGGGTGGCAAGGAGCTTGCCAAGCGTCCCGCTGCGCG
CGAGCAGCGGGGCGGCAGGAATGATAGCCAGAGCGCTTCTACTGGAAGGG
ATGCGGATGGGAGAAAAAAGAAGCGGCCACGAAGCCAGGTCGAAGAGGAT
GAAGAAGAGGAGAGAGAGGAGGGAGGTCGTCAATCCGTGGAGGACGAGCT
TGTGGCCACCATTCAGGAACATGACGAGTTTTTCTCGAGGATGCTGGACA
TGATTCCGGAGCACCTGGTGCTCCGCGCGAAGGAGGTCGCGGAGTCTTCA
TACGCCAGCAAGTACATGAAGAACAAGAAGGGCGAGGCGCCGAAGCAATC
GAAGAAGGAGGAATCCAAGAAGAACAAACGGGCCCGCTACGCCGCCGACA
ACCAGAAGACACTCCTGGAGAAGCAGCAGGAGCGCGCCAAGGCCGTCGAG
GATGGGGGCGATGCTGACGCTGGTAGCAACAAAGACAACGATGATGACGG
CGACGAGAGTGACGGGGGCCTACAGGCGGCCGCGGAGCAGGACGGGCTCC
AGAGCGAGGTGCTCAGGGGCAAGAGTATGGACGTGGCGTCCATGGATGCC
CTCAAGAAGCGGATAGAGGAGCGCATCAAGGTCTTCCAGGAGAAGCGAAC
CGCCGCAGAGGGAAGCCGTCGAGCGAAAACCGCCGCTAAGAGGAGCGCAA
AGACGGCAACGAAGCGGGAGAACAAGCGCAAGGGCGCCAAGGCCAGGAAG
AAGGGGAGGGAAGGGGCGATTGCCGCGGTAGCGGCAACGGGGGGAGCGGC
GGGTGGAGCCAAGGGGTCCGCAGAAGCCGCAAACGGGGCCGGTGAAGGGA
AGGCCAAGGGGGCCAAGGTAGAAGCCAATGGCTCGCATGCACCCGTTGCA
AAGCCGCAGCTTCCCCCTCTGCCGACCGTGGAAGATGTAGGAGACATCGA
GTTCTCCGGGCTGCGGGGAGTCGTTGGCGACGGCAGCGGCAACCGCGGAA
AGCACGGTTTGCCCAAGGTGGGCGCTCCGGGCAGCAAGATGAAGCGCCTG
CACGGCCTGCTGGCTGCCGCGGAGGAGAAGAAGCAGCGGCTTGCGGGACT
CCGTCAAACGGAGGAGGGCAAAGAGAAGGCTAAGGAGGAGGGGTGGGCGG
ACGCTATCCGCGTGGCCGGAGGGGCCGAGATCAAGGACAACCCGGCTGCC
CTGAAGAAGATGATCAAGCGCAAGGAGAAGGAGAAGGCGAAGAGCGCCGC
CAAGTGGGACAAGAGGTTGTCGGGGCAGAGGAAAGAGCAGGCCAAGAGGC
AGGATAAGCGTGAGGAGAACCTCAACAGGAGGAAGAAGGGAGGCCCCGCG
GTGGGGGATACCGACAAGGCGGCAGCGGGGGGGGATGCCGCTTCGGGTCA
AGACGCGAAGCGCCAGAGGCGCGCTGGCTTTGAGGGTAAGAAGCAGGACT
TTATCAACAAAGAGAGGCCCAGCAAGGCCGGCGAGCGAGGGGGAGGCGGA
GGGCGCGGAGGCGCTAGGGGGGGGCGGGGACGGGGTGGGGGCGGCAGGGA
TGGCGGCCGGGGGCGCGGCGGGGGTAGGGGCGGTGGTGGCAGGGGGCGAG
GGTAG
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