prot_Ecto-sp13_S_contig8231.19588.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8231.19588.1
Unique Nameprot_Ecto-sp13_S_contig8231.19588.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length411
Homology
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: D7G0X2_ECTSI (HDAC_interact domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X2_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 4.170e-174
Identity = 359/406 (88.42%), Postives = 362/406 (89.16%), Query Frame = 0
Query:    1 SQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIRFDCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRTALLAKEEEPKPLDRAALADAADAAAKEAAKXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKAXXXEESKDESNQDGTNDASXXXXXXXXXXKVKAETQNGGGKAGEEGARQAAVDKMVADHEAQVKAAKQAKAERYR 406
            SQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFK           CEDERFELDMVIEAGSSAI+LLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQR TYYKSLDRRSID+KNEDKKAHSARVLVADITHRRTALLAKEEEPK LDRAALADAADAAAKEAAK    XXXXXXXXXX  K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXX                XXXXXXXXXX VKAE QNGGGKA EEGARQAAVDKMVADH+AQVKAAKQAKAER R
Sbjct:  308 SQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFK-----------CEDERFELDMVIEAGSSAISLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRRTALLAKEEEPKSLDRAALADAADAAAKEAAKACSSXXXXXXXXXXV-KGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKAEMQNGGGKAREEGARQAAVDKMVADHDAQVKAAKQAKAERER 701          
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: A0A6H5KFU2_9PHAE (Sin3a_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU2_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 1.040e-115
Identity = 260/298 (87.25%), Postives = 261/298 (87.58%), Query Frame = 0
Query:  112 MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRTALLAKEEEPKPLDRAALADAADAAAKEAAKXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKAXXXEESKDESNQDGTNDASXXXXXXXXXXKVKAETQNGGGKAGEEG---ARQAAVDKMVADHEAQVKAAKQAKAERYR 406
            MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQR TYYKSLDRRSIDLKNEDKKAHSARVLVADITHRR ALLAKEEEPKPLDRAALADAADAAAKEAAK   XX      XXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXEE KDESNQ+GTNDAS          KVKAE QNG GKAGEEG   ARQAAVDKMVADHEAQV AAKQAKAER R
Sbjct:    1 MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRAALLAKEEEPKPLDRAALADAADAAAKEAAKASNXXSCGGDEXXXVTGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXEEIKDESNQEGTNDASSSSSPVKQQQKVKAEIQNGDGKAGEEGEEGARQAAVDKMVADHEAQVMAAKQAKAERER 297          
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: A0A7S3XWL9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWL9_HETAK)

HSP 1 Score: 231 bits (590), Expect = 5.690e-69
Identity = 126/252 (50.00%), Postives = 163/252 (64.68%), Query Frame = 0
Query:    1 SQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIRFDCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGAR-----YQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRR 247
            S +G  +++  ++W + PL+E+D     K  PSYR LPK++    CSER+ LE  VLND WVSVPVGSE    + +FKHMRKNQ+E+ LF+           CEDERFE+DMVI++ ++A   LEP+  E++ +    G R      Q+KLD+R LS V L AI RIYGDHGAEILELL+KNP   +PVIL RL+QKD EWR +R+ LNK W  VQ   ++KSLD RS   K  DKK  S R LV ++  RR
Sbjct:   53 SLKGTADQLGGDLWYSMPLSEIDFGQCRKCTPSYRALPKDYLRPPCSERSLLEHRVLNDTWVSVPVGSE---DNYSFKHMRKNQYEEALFR-----------CEDERFEVDMVIDSNAAAAAALEPLAREVRALQAAEGTRGGERRLQYKLDKRALSVVHLNAIIRIYGDHGAEILELLKKNPAGAIPVILKRLKQKDAEWRKARQDLNKHWKEVQEKNWHKSLDHRSFYFKQADKKQCSQRALVQEVKERR 290          
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: A0A7S1UGB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGB0_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.890e-59
Identity = 114/252 (45.24%), Postives = 159/252 (63.10%), Query Frame = 0
Query:    4 GEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIRFDCEDERFELDMVIEAGSSAINLLEPMEEEIKCI-------DKTAGAR-----YQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVADI 243
            G+   +A++ W    ++++D T   +  PSYR LP+ FP   CS R++ +  VLND WVS+PVGSE    + +FKHMR+N +E+ LFK           CEDERFE+DMVI++ +S I +LEP+  EI+ +        +TAG       +Q+KLD R LS V + AI+RIYG+HGAEI ELLRKNP   VPV+L RL+QKD+EWR +R+ L + W  +    ++KSLD RS   + +DK+A S R L  DI
Sbjct:   89 GKAGGLAAQPWYGMAVSDVDFTQCRRCTPSYRALPQYFPRPPCSMRSTDDGKVLNDQWVSLPVGSE---ENYSFKHMRRNTYEETLFK-----------CEDERFEMDMVIDSNASTIRVLEPLAAEIEALRVAEGDGGETAGIAGAVPAFQYKLDPRTLSRVHINAISRIYGEHGAEIQELLRKNPAGAVPVVLNRLKQKDIEWRRARQELARQWKGLMEANFHKSLDHRSFYFRTQDKRAISIRGLTQDI 326          
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: A0A835ZD67_9STRA (HDAC_interact domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD67_9STRA)

HSP 1 Score: 217 bits (553), Expect = 9.590e-59
Identity = 130/288 (45.14%), Postives = 170/288 (59.03%), Query Frame = 0
Query:    9 IASEMWTNTPLNELDLTLSEKGGPSYRHLPK--------------------NFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIRFDCEDERFELDMVIEAGSSAINLLEPMEEEI-KCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQK--------------------DVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRTALLAKEE 255
            + +++W +TPL E+D +   K  PSYR LPK                    ++P  SCSER+ +E SVLND WVSVPVGSE   +   FKHMRKNQ+E+ LF+           CEDERFE+DMVI++ +S I LLEP+ EEI +     + A YQFKLD+R L  V L AITRIYGD GAE+LELLRKNP   VP+IL RL+QK                    D EWR +R  L++ W ++   TY+KSLDRRS   K+ D++A+  R L+A+I     A  A+E+
Sbjct:  632 LTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSN---FKHMRKNQYEEALFR-----------CEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAARAAEED 905          
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: A0A7S3HNY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNY2_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.880e-58
Identity = 129/291 (44.33%), Postives = 170/291 (58.42%), Query Frame = 0
Query:    5 EVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIRFDCEDERFELDMVIEAGSSAINLLEPMEEEI---KCID--------------KTAGA-------RYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRTALLAKEEEPKPLDRAALADAADA 271
            E  E  S++W   PL+E+D     K  PSYR LP+++P   C+ER+  E  VLND WVS+P+GSE      +FKHMRKNQ+E+ LFK           CEDERFE+DMVI++    I +LEP+ EEI   K I+              +T G        R+ F+L++R LS + L +I RIYGDHG EILELLR+NP  T+PV+L RL+QKD+EWR +R  LNK W  V    + +S D RS   +  DKK  S R LV +IT      LA   +  P   AA+A+AA+A
Sbjct:  184 EYEEHKSDVWYAVPLSEIDFAQCRKCTPSYRALPRDYPKAKCTERSEEEAKVLNDQWVSIPIGSE---ESYSFKHMRKNQYEEALFK-----------CEDERFEIDMVIDSNMCTIRVLEPLAEEIATLKSIETIPRGTLHGDAATGQTQGGASTSIAPRFSFQLEKRHLSTIHLNSIARIYGDHGEEILELLRRNPAGTIPVLLKRLKQKDLEWRKARTELNKHWREVVEKNHTRSFDHRSFYFRQHDKKYLSTRQLVTEIT-----TLANPAQATP---AAIAEAANA 452          
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: A0A7S3MGY4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGY4_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.090e-56
Identity = 129/291 (44.33%), Postives = 170/291 (58.42%), Query Frame = 0
Query:    5 EVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIRFDCEDERFELDMVIEAGSSAINLLEPMEEEI---KCID--------------KTAGA-------RYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRTALLAKEEEPKPLDRAALADAADA 271
            E  E  S++W   PL+E+D     K  PSYR LP+++P   C+ER+  E  VLND WVS+P+GSE      +FKHMRKNQ+E+ LFK           CEDERFE+DMVI++    I +LEP+ EEI   K I+              +T G        R+ F+L++R LS + L +I RIYGDHG EILELLR+NP  T+PV+L RL+QKD+EWR +R  LNK W  V    + +S D RS   +  DKK  S R LV +IT      LA   +  P   AA+A+AA+A
Sbjct:  285 EYEEHKSDVWYAVPLSEIDFAQCRKCTPSYRALPRDYPKAKCTERSEEEAKVLNDQWVSIPIGSE---ESYSFKHMRKNQYEEALFK-----------CEDERFEIDMVIDSNMCTIRVLEPLAEEIATLKSIETIPRGTLHGDAATGQTQGGASTSIAPRFSFQLEKRHLSTIHLNSIARIYGDHGEEILELLRRNPAGTIPVLLKRLKQKDLEWRKARTELNKHWREVVEKNHTRSFDHRSFYFRQHDKKYLSTRQLVTEIT-----TLANPAQATP---AAIAEAANA 553          
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: A0A067BV90_SAPPC (HDAC_interact domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BV90_SAPPC)

HSP 1 Score: 209 bits (532), Expect = 2.380e-56
Identity = 116/238 (48.74%), Postives = 154/238 (64.71%), Query Frame = 0
Query:    4 GEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIRFDCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVA 241
            GEV +   E+W   PL E DL+   +  PSYR LP ++P+   S R+ +E++V ND WVSVP GSE    D +FK+MRKNQ+E+ LFK           CEDERFE+DMVI+A +S I +L P+ +EI+ +  T+   +Q+ LD+  L    L AITRIYG+ G +ILELLRK+P   +PVIL RL QKD EWR +R+ LNK W +V    Y+KSLD  S   K +DKKA SA+ L+A
Sbjct:  261 GEVKD-QHEIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERAVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFK-----------CEDERFEIDMVIDANASTIAILTPLAKEIETLSATSPTGWQYVLDKGALRVTHLNAITRIYGEAGHQILELLRKHPAGAIPVILKRLLQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 482          
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: A0A1V9ZFI4_9STRA (Paired amphipathic helix protein Sin3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFI4_9STRA)

HSP 1 Score: 209 bits (533), Expect = 4.050e-56
Identity = 113/230 (49.13%), Postives = 149/230 (64.78%), Query Frame = 0
Query:   12 EMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIRFDCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVA 241
            E+W   PL E DL+   +  PSYR LP ++P+   S R+ +E+SV ND WVSVP GSE    D +FK+MRKNQ+E+ LFK           CEDERFE+DMVI+A +S I +L P+ +EI+ +  T+   +Q+ LD+  L    L AITRIYG+ G +ILELLRK+P   +PVIL RL+QKD EWR +R+ LNK W  V    Y+KSLD  S   K +DKKA S +V +A
Sbjct:  619 EIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERSVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFK-----------CEDERFEIDMVIDANASTIAILTPLAKEIETLQATSPTGWQYVLDKGALRVTHLNAITRIYGESGHQILELLRKHPAGAIPVILKRLQQKDEEWRRARQDLNKQWKEVNEKNYHKSLDHSSFYFKQKDKKATSTKVFLA 833          
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Match: T0RRZ2_SAPDV (HDAC_interact domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RRZ2_SAPDV)

HSP 1 Score: 208 bits (530), Expect = 1.030e-55
Identity = 116/238 (48.74%), Postives = 154/238 (64.71%), Query Frame = 0
Query:    4 GEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIRFDCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVA 241
            GEV +   E+W   PL E DL+   +  PSYR LP ++P+   S R+ +E++V ND WVSVP GSE    D +FK+MRKNQ+E+ LFK           CEDERFE+DMVI+A +S I +L P+ +EI+ +  T+   +Q+ LD+  L    L AITRIYG+ G +ILELLRK+P   +PVIL RL QKD EWR +R+ LNK W +V    Y+KSLD  S   K +DKKA SA+ L+A
Sbjct:  637 GEVKD-QHEIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERAVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFK-----------CEDERFEIDMVIDANASTIAILTPLAKEIETLAATSPTGWQYVLDKGALRVTHLNAITRIYGEAGHQILELLRKHPAGAIPVILKRLLQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 858          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8231.19588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0X2_ECTSI4.170e-17488.42HDAC_interact domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KFU2_9PHAE1.040e-11587.25Sin3a_C domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3XWL9_HETAK5.690e-6950.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1UGB0_9STRA1.890e-5945.24Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835ZD67_9STRA9.590e-5945.14HDAC_interact domain-containing protein n=1 Tax=Tr... [more]
A0A7S3HNY2_9STRA1.880e-5844.33Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3MGY4_9STRA2.090e-5644.33Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A067BV90_SAPPC2.380e-5648.74HDAC_interact domain-containing protein n=1 Tax=Sa... [more]
A0A1V9ZFI4_9STRA4.050e-5649.13Paired amphipathic helix protein Sin3 n=1 Tax=Thra... [more]
T0RRZ2_SAPDV1.030e-5548.74HDAC_interact domain-containing protein n=1 Tax=Sa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013194Histone deacetylase interacting domainSMARTSM00761hdac_interact2seq4bcoord: 26..141
e-value: 2.2E-35
score: 133.6
IPR013194Histone deacetylase interacting domainPFAMPF08295Sin3_corepresscoord: 30..132
e-value: 1.2E-26
score: 92.6
IPR039774Transcriptional regulatory protein Sin3-likePANTHERPTHR12346SIN3B-RELATEDcoord: 13..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8231contigEcto-sp13_S_contig8231:67..6367 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8231.19588.1mRNA_Ecto-sp13_S_contig8231.19588.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8231 67..6367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8231.19588.1 ID=prot_Ecto-sp13_S_contig8231.19588.1|Name=mRNA_Ecto-sp13_S_contig8231.19588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=411bp
SQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERT
SLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKASRFLESIR
FDCEDERFELDMVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRV
LSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSR
ERLNKLWSNVQRGTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRTAL
LAKEEEPKPLDRAALADAADAAAKEAAKASSSSSGGGGDEDDDVKGKGKG
KKDDDMETEDNEAGSKEGKGAAGGDGDKGKAAAAEESKDESNQDGTNDAS
SSSPPGKQQQKVKAETQNGGGKAGEEGARQAAVDKMVADHEAQVKAAKQA
KAERYRRPPSS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013194HDAC_interact_dom
IPR039774Sin3-like