prot_Ecto-sp13_S_contig8205.19561.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8205.19561.1
Unique Nameprot_Ecto-sp13_S_contig8205.19561.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length334
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8205.19561.1 vs. uniprot
Match: A0A6H5KX93_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX93_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 1.380e-91
Identity = 204/234 (87.18%), Postives = 211/234 (90.17%), Query Frame = 0 
Query:  104 EAGSRGAGSGGISYGTLAVGAAGGRGSLAVDRDWQREREVERERVSSRRDPR---KTGSRESGVNYGKEADTRERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLQELAGDSDENPPKSSGPKEKTGIFSYIKKTAAAINGSNPVASSSGRDDTTADGRAAGADGRAKAAAARAARPNSAALVNILRSDRRTNIRMDREQFDGAQTRLRKLAPEGNDVCDNF 334
            EAG+RG GSGGISYG LAVGAAGGRGSLA+D+DWQREREVERER SSRRDPR     GSR+SGVNYGKEADTRE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLQELA DSDE+PPKSSGPKEKTGIFSYIKKTAAAING+NP+A SSGRD TTADGRAAG         ARAARPNSAALVNILRSDRRTNIRMDREQFDGAQTRLRKLAPEGNDVCDNF
Sbjct:  106 EAGARGGGSGGISYGNLAVGAAGGRGSLAIDKDWQREREVERERASSRRDPRGGAAAGSRDSGVNYGKEADTREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLLQELAVDSDEDPPKSSGPKEKTGIFSYIKKTAAAINGNNPIAGSSGRDATTADGRAAGXXXXXXXXXARAARPNSAALVNILRSDRRTNIRMDREQFDGAQTRLRKLAPEGNDVCDNF 339
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8205.19561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KX93_9PHAE1.380e-9187.18C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 183..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8205contigEcto-sp13_S_contig8205:5416..6417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8205.19561.1mRNA_Ecto-sp13_S_contig8205.19561.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8205 5416..6417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8205.19561.1 ID=prot_Ecto-sp13_S_contig8205.19561.1|Name=mRNA_Ecto-sp13_S_contig8205.19561.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=334bp
MKKQYRRRRADSESAGSDEEEDEEEGEEGEVVLEHKPSRKRERTSTRRQS
PERSHRSGGGSGRRSSSGGRTSGSRRRDGDDSSRKRRDRERDRDDEDSRH
RRREAGSRGAGSGGISYGTLAVGAAGGRGSLAVDRDWQREREVERERVSS
RRDPRKTGSRESGVNYGKEADTRERDRARDREKERERERVRERDRERERA
KERERDREKDRERDRLLQELAGDSDENPPKSSGPKEKTGIFSYIKKTAAA
INGSNPVASSSGRDDTTADGRAAGADGRAKAAAARAARPNSAALVNILRS
DRRTNIRMDREQFDGAQTRLRKLAPEGNDVCDNF
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