prot_Ecto-sp13_S_contig8191.19542.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8191.19542.1
Unique Nameprot_Ecto-sp13_S_contig8191.19542.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length122
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8191.19542.1 vs. uniprot
Match: D7FM14_ECTSI (DNA polymerase I (POL I) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM14_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 7.600e-75
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 0 
Query:    1 MMSTGEIVAIVEDRCLNDPVHRHTDPDSDVGNGPAAARAPEDPAVDAGSMASLWRESGHSYSSWEAESTRQVLVRLGGRYGRVYSYPADKVFRVQANFFSDAKAEAMKEGGLGARCPWFANE 122
            MMSTGEIVAIVED+CLNDPVHRHTDPD DVGNGP AARAPEDPAV AGSMASLWRESGHSYSSWEAESTRQVLVRLGGR+GRVYSYPADKVFRVQANFFSDA AEAMK+GGLGARCPWFA E
Sbjct:   89 MMSTGEIVAIVEDKCLNDPVHRHTDPDDDVGNGPPAARAPEDPAVGAGSMASLWRESGHSYSSWEAESTRQVLVRLGGRHGRVYSYPADKVFRVQANFFSDANAEAMKDGGLGARCPWFAKE 210
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BLAST of mRNA_Ecto-sp13_S_contig8191.19542.1 vs. uniprot
Match: A0A6H5L306_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L306_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 5.880e-71
Identity = 115/122 (94.26%), Postives = 117/122 (95.90%), Query Frame = 0 
Query:    1 MMSTGEIVAIVEDRCLNDPVHRHTDPDSDVGNGPAAARAPEDPAVDAGSMASLWRESGHSYSSWEAESTRQVLVRLGGRYGRVYSYPADKVFRVQANFFSDAKAEAMKEGGLGARCPWFANE 122
            MMSTGEIVA+VED+CLNDPVHRHTDPD DVGNGP AARAPEDPAV AGSMASLWRESGHSYSSWEAESTRQVLVRLGGR GRVYSYPADKVFRVQANFFSDAKAEAMKEGGLGARCPWFA E
Sbjct: 1889 MMSTGEIVAVVEDKCLNDPVHRHTDPDGDVGNGPPAARAPEDPAVGAGSMASLWRESGHSYSSWEAESTRQVLVRLGGRRGRVYSYPADKVFRVQANFFSDAKAEAMKEGGLGARCPWFAKE 2010
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8191.19542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM14_ECTSI7.600e-7593.44DNA polymerase I (POL I) n=1 Tax=Ectocarpus silicu... [more]
A0A6H5L306_9PHAE5.880e-7194.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8191contigEcto-sp13_S_contig8191:3169..4358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8191.19542.1mRNA_Ecto-sp13_S_contig8191.19542.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8191 3139..4358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8191.19542.1 ID=prot_Ecto-sp13_S_contig8191.19542.1|Name=mRNA_Ecto-sp13_S_contig8191.19542.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp
MMSTGEIVAIVEDRCLNDPVHRHTDPDSDVGNGPAAARAPEDPAVDAGSM
ASLWRESGHSYSSWEAESTRQVLVRLGGRYGRVYSYPADKVFRVQANFFS
DAKAEAMKEGGLGARCPWFANE
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