prot_Ecto-sp13_S_contig817.19517.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig817.19517.1
Unique Nameprot_Ecto-sp13_S_contig817.19517.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length599
Homology
BLAST of mRNA_Ecto-sp13_S_contig817.19517.1 vs. uniprot
Match: D8LN86_ECTSI (Similar to DNA (Cytosine-5-)-methyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN86_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.040e-114
Identity = 380/591 (64.30%), Postives = 384/591 (64.97%), Query Frame = 0
Query:    4 EEERGPRPAGDDSSSAATGAPAERAPGGSSLGGVPPSDLETASSPASLTKAVAAAGGVEEYVLLDDAVSGATVSGGGDEGSAPADEVGTETATAVDGVPPSSPCPSSPAATADGTGASPGAASALPIAATAVTTSPTLAXXTPPPRAVAAKLGGAAGAEAAXXT-------EPMEMETSGXXXXXXXXXXXXXXLRTGVVLAGAGTKAAGGLSKGTAAVAAXXXXXXXXXXXXX-TGGKAAAQALFPRGRGGAXXRAXXXXXXXXXXMAKETKGRRRRGGRLSARCLTKTLRNAGESATGTSAIRWRHTASSSPVFAGSTRKHGSTGGGGXXXXXXXXXRSAGAVXXXXXXXXXXXXXXXXXXXXXXXXXVNRGGRXXXXXXXXKDGVDXXXXXXXXXXXXXXXXGGTAALPRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEFDRKAKTVITQLSSEXXXXXXXXXXXXT----PWRSSASPRGRGRRGGSVAATSGXXXXXIGSGDVYEDRGAGXXGRKRSLSSPSSA 582
            EE   PRP GDDS  AATGAPAERAPGGSSLGG P SDLET SSPASLT A                    TVSGGGDEG  PADEVG E ATA                                             XX                    XX        EPMEMETSG                         TK AGGLSKGTA    XXXXXXXXXXX   T G          GR   XX  XXXXXXXXXX      G     GRLSARCLTKTLRNAGESATGTSA RWRHTASSSPVF GSTRKHG + G GXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXX     XXXXXXXXXXXXXXXX      PRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEFDRKAKTVITQLSSE XXXXXXXXXXX     P RSSASPRGRGRRGGS+AATS XXXXXIGSGD+YEDRGA XX  KR+ SSPSSA
Sbjct:   59 EERDDPRPTGDDSRVAATGAPAERAPGGSSLGGGPSSDLETTSSPASLTNAXXXXXXXXXXXXXXXXXXX-TVSGGGDEGPTPADEVGAEMATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPMEMETSGAQS----------------------TKPAGGLSKGTAXXXXXXXXXXXXXXXAGSTDGHETTTKHRDEGRXXXXXXXXXXXXXXXXXXXXXXXG-----GRLSARCLTKTLRNAGESATGTSASRWRHTASSSPVFVGSTRKHGGSIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XPPRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEFDRKAKTVITQLSSEQXXXXXXXXXXXXXXXXPGRSSASPRGRGRRGGSLAATSXXXXXXIGSGDLYEDRGAXXXXXKRNFSSPSSA 617          
BLAST of mRNA_Ecto-sp13_S_contig817.19517.1 vs. uniprot
Match: A0A6H5JKB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB5_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.540e-32
Identity = 114/176 (64.77%), Postives = 117/176 (66.48%), Query Frame = 0
Query:    1 MEDEEERGPRPAGDDSSSAATGAPAERAPGGSSLGGVPPSDLETASSPASLTKAVAAAGGVEEYVLLDDAVSGATVSGGGDEGSAPADEVGTETATAVDGVPPSSPCPSSPAATADGTGASPGAASALPIAATAVTTSPTLAXXTPPPRAVAAKLGGAAGAEAAXXTEPMEMETSG 176
            M+DEEER PR AGDDSSS ATGA AERAPG SSLGG P SDLET+SSPASL KAVAAAGGVEE VL DD VSGA VSGGGD+GSAPADEVGTET TAVDGVPP           AD TG S                     XX     AVAAKLGGA      XXTEPMEMET G
Sbjct: 1156 MDDEEERDPRLAGDDSSSVATGASAERAPGDSSLGGDPSSDLETSSSPASLAKAVAAAGGVEEDVL-DDVVSGAAVSGGGDKGSAPADEVGTETTTAVDGVPPFXXXXXXXXXXADDTGVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAAKLGGAXXXXXXXXTEPMEMETYG 1330          
BLAST of mRNA_Ecto-sp13_S_contig817.19517.1 vs. uniprot
Match: A0A6H5JMT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT6_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 2.310e-23
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0
Query:  403 TAALPRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVR 455
            TA  PRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVR
Sbjct:  201 TAVPPRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVR 253          
BLAST of mRNA_Ecto-sp13_S_contig817.19517.1 vs. uniprot
Match: A0A7S2WD19_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WD19_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.940e-9
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  452 KKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVE 499
            ++  RCGECA CR+ +CG CR+C+DMP  GG G+ KQ CE R+C  V+
Sbjct:   78 RRSNRCGECAGCRAQNCGDCRFCLDMPIFGGPGNLKQGCERRQCMAVQ 125          
BLAST of mRNA_Ecto-sp13_S_contig817.19517.1 vs. uniprot
Match: K0RWQ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RWQ5_THAOC)

HSP 1 Score: 63.2 bits (152), Expect = 1.440e-6
Identity = 27/64 (42.19%), Postives = 43/64 (67.19%), Query Frame = 0
Query:  452 KKVRRCGECAPCR-SADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEFDRKA-KTVITQLSS 513
            K++ +CG+C  C+ + DCGQC++C+D PK GG+   +Q C  RKC ++ + + A  T IT L+S
Sbjct:  741 KRMFKCGDCTACKITFDCGQCQFCLDKPKFGGKNRLRQTCIKRKCPFMRYAKPAGSTPITTLTS 804          
BLAST of mRNA_Ecto-sp13_S_contig817.19517.1 vs. uniprot
Match: UPI00193D4D69 (jmjC domain-containing histone demethylation protein 1-like n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193D4D69)

HSP 1 Score: 59.3 bits (142), Expect = 1.760e-5
Identity = 33/83 (39.76%), Postives = 40/83 (48.19%), Query Frame = 0
Query:  417 TQPPRFGKQDKALLATHGAKQPKGKHPG-YIITLYGKKVRR---CGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKC 495
            T  P    + K +      K+ K K  G Y +   GK  RR   C  C  C+  DCG+C YC+DMPK GG G  KQ C  R C
Sbjct:  439 TSLPYVSPEKKVVRNQTKVKKRKYKKTGMYQLKKKGKAQRRRTRCRNCEACQHFDCGECIYCLDMPKFGGPGKAKQTCVKRNC 521          
BLAST of mRNA_Ecto-sp13_S_contig817.19517.1 vs. uniprot
Match: R1G1Q6_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G1Q6_EMIHU)

HSP 1 Score: 58.5 bits (140), Expect = 3.510e-5
Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 0
Query:  452 KKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKC 495
            KK  RCGEC  C + +C   R+C+DMPK GG G+ +QPC  R+C
Sbjct:  498 KKKMRCGECEACVAPNCXXXRFCLDMPKFGGVGTLRQPCLQRRC 541          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig817.19517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LN86_ECTSI1.040e-11464.30Similar to DNA (Cytosine-5-)-methyltransferase (Pa... [more]
A0A6H5JKB5_9PHAE1.540e-3264.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMT6_9PHAE2.310e-2396.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WD19_9STRA1.940e-954.17Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
K0RWQ5_THAOC1.440e-642.19Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
UPI00193D4D691.760e-539.76jmjC domain-containing histone demethylation prote... [more]
R1G1Q6_EMIHU3.510e-552.27Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002857Zinc finger, CXXC-typePFAMPF02008zf-CXXCcoord: 452..495
e-value: 3.5E-11
score: 42.9
IPR002857Zinc finger, CXXC-typePROSITEPS51058ZF_CXXCcoord: 449..496
score: 12.255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig817contigEcto-sp13_S_contig817:7100..17789 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig817.19517.1mRNA_Ecto-sp13_S_contig817.19517.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig817 2491..20673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig817.19517.1 ID=prot_Ecto-sp13_S_contig817.19517.1|Name=mRNA_Ecto-sp13_S_contig817.19517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=599bp
MEDEEERGPRPAGDDSSSAATGAPAERAPGGSSLGGVPPSDLETASSPAS
LTKAVAAAGGVEEYVLLDDAVSGATVSGGGDEGSAPADEVGTETATAVDG
VPPSSPCPSSPAATADGTGASPGAASALPIAATAVTTSPTLAAATPPPRA
VAAKLGGAAGAEAAAATEPMEMETSGTQEDENDEEEERERLRTGVVLAGA
GTKAAGGLSKGTAAVAASRGKGAGVATAASTGGKAAAQALFPRGRGGAAA
RAAAAGAAAAGGMAKETKGRRRRGGRLSARCLTKTLRNAGESATGTSAIR
WRHTASSSPVFAGSTRKHGSTGGGGGGDNGGASGRSAGAVGSSMSSGGVS
GGRGGGSGSGGGGGGVNRGGRGSGGGGGGKDGVDGGGVRAGPGAAAKGGG
GGTAALPRLPTYSTTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLY
GKKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEF
DRKAKTVITQLSSEQQQRSGGGGGGGTPWRSSASPRGRGRRGGSVAATSG
GRGGGIGSGDVYEDRGAGGGGRKRSLSSPSSACASRSGATRWVVRQRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002857Znf_CXXC