mRNA_Ecto-sp13_S_contig81550.19498.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: D7FRQ6_ECTSI (Putative methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ6_ECTSI) HSP 1 Score: 351 bits (900), Expect = 1.010e-118 Identity = 188/201 (93.53%), Postives = 193/201 (96.02%), Query Frame = 1
Query: 1 LWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAAQTTQGEGDSAADEGGVGDLESKTTSSGGKDGAGEVSGTDAAVASAAVSTTLSATEINDSAEATGGDVSFGIGRALTGDESRAEVPATVAAAVASYAASAIAGPLTFVPAVPAATNFEAKYVAVGETV 603
LW+LASR+NAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAAQTT+GEGDSAADEGG+GDLESK TSSGGKDGAGEVSGTDAAVASAAVST LSATE +DSAE TGGDVSFGIGRAL GDESRAEVPATVAAA SYAASA AGPLTFVPAVPAATNFEAKYVAVGETV
Sbjct: 181 LWILASRENAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAAQTTEGEGDSAADEGGLGDLESKRTSSGGKDGAGEVSGTDAAVASAAVSTKLSATESDDSAETTGGDVSFGIGRALIGDESRAEVPATVAAAAVSYAASARAGPLTFVPAVPAATNFEAKYVAVGETV 381
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: A0A0P7Y7X8_9GAMM (Putative S-adenosylmethionine-dependent methyltransferase n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A0P7Y7X8_9GAMM) HSP 1 Score: 95.1 bits (235), Expect = 1.140e-20 Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 4 WVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAING 216
W LA W + HY+LYPNPYPK S L+ RWHGH VFP LL+LGG++ +RSNWR Y+DE AV + G
Sbjct: 113 WRLAH-GAGWTPERHYLLYPNPYPKASHLKMRWHGHPVFPTLLALGGLVEVRSNWRLYIDEFALAVAQVTG 182
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: A0A5B8SSD4_9GAMM (Methyltransferase domain-containing protein n=1 Tax=Pistricoccus aurantiacus TaxID=1883414 RepID=A0A5B8SSD4_9GAMM) HSP 1 Score: 95.1 bits (235), Expect = 1.290e-20 Identity = 42/77 (54.55%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 4 WVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAAQTTQ 234
W LA D W + HY+LYPNPYPK S L+ RWHGH VFP LL+LGG + LRSNWR YL+E A G Q
Sbjct: 113 WRLAL-DAGWRPRRHYLLYPNPYPKASHLKQRWHGHPVFPTLLALGGRLELRSNWRLYLEEFALAAARAGGGTAEVQ 188
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: A0A4V2L0H3_9ALTE (SAM-dependent methlyltransferase n=1 Tax=Bowmanella sp. JS7-9 TaxID=1605368 RepID=A0A4V2L0H3_9ALTE) HSP 1 Score: 94.4 bits (233), Expect = 2.230e-20 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 4 WVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAI 210
W LA + N W+I +HY+LYPNPYPK+SQL+ RWHGH F L++LGG +T+RSNW+TY+ E A+ +
Sbjct: 117 WRLAKQAN-WQISQHYLLYPNPYPKKSQLQKRWHGHPAFVDLVALGGHLTVRSNWQTYIQEFANALQCL 184
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: UPI00100A59A6 (SAM-dependent methyltransferase n=2 Tax=Halomonadaceae TaxID=28256 RepID=UPI00100A59A6) HSP 1 Score: 93.6 bits (231), Expect = 5.080e-20 Identity = 42/73 (57.53%), Postives = 49/73 (67.12%), Query Frame = 1
Query: 4 WVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAA 222
W LA + W HY+LYPNPYPK SQL+ RWHGHSVFP LL+LGG + LRSNWR Y++E A AA
Sbjct: 113 WRLALAE-GWRPSHHYLLYPNPYPKASQLKLRWHGHSVFPTLLALGGRLELRSNWRVYVEEFALATAEAGLAA 184
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: A0A369KSM0_9GAMM (SAM-dependent methyltransferase n=1 Tax=Halomonas sp. DQ26W TaxID=2282311 RepID=A0A369KSM0_9GAMM) HSP 1 Score: 93.2 bits (230), Expect = 8.210e-20 Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 4 WVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGA 219
W LA + W+ HY+LYPNPYPK + L++RWHGH++FPV+L+LGG + LRSNWR Y++E A+ + GA
Sbjct: 115 WRLALQA-GWQPVRHYLLYPNPYPKSAHLKTRWHGHAIFPVILALGGRLELRSNWRLYVEEFALALEQVTGA 185
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: A0A1H0EKN1_9GAMM (tRNA G46 methylase TrmB n=1 Tax=Halomonas arcis TaxID=416873 RepID=A0A1H0EKN1_9GAMM) HSP 1 Score: 92.8 bits (229), Expect = 8.630e-20 Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 4 WVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAING 216
W LA W + HY+LYPNPYPK S L+ RWHGH VFP LL+LGG+I LRSNW+ Y++E AV + G
Sbjct: 113 WRLAHLA-GWAPERHYLLYPNPYPKASHLKMRWHGHPVFPTLLALGGLIELRSNWQLYVEEFALAVAQVTG 182
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: A0A3D9DW02_9GAMM (tRNA G46 methylase TrmB n=1 Tax=Kushneria indalinina DSM 14324 TaxID=1122140 RepID=A0A3D9DW02_9GAMM) HSP 1 Score: 92.4 bits (228), Expect = 1.520e-19 Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 4 WVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAING 216
W LA W+ H++LYPNPYPK SQL+ RWH H VFPV+++LGGV+TLRSNW+ Y+DE A+ G
Sbjct: 117 WRLAY-SAGWQPVRHFLLYPNPYPKASQLKRRWHAHPVFPVVMALGGVLTLRSNWQVYVDEFACAINLATG 186
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: A0A7S2FM74_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM74_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.320e-19 Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 10 LASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAAQTTQG 237
L + W +K HYILYPNP PKR L+SRWHGH FP++L LGG I +RSNWRT+L E +AV+ + A + + G
Sbjct: 105 LQALSAGWNLKAHYILYPNPNPKR--LKSRWHGHPAFPLILMLGGDIIVRSNWRTFLSEFSEAVVIAHEACEVSSG 178
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Match: A0A4T0URY1_9NEIS (SAM-dependent methyltransferase n=1 Tax=Crenobacter intestini TaxID=2563443 RepID=A0A4T0URY1_9NEIS) HSP 1 Score: 91.7 bits (226), Expect = 2.380e-19 Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 1 LWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAA 222
LW L + D + +H++LYPNP+PK L+ RWHGH VFP+LL LGGV+ LRSNW+ Y DE A+ A+ GAA
Sbjct: 112 LWRLMAGDGV-RLAQHWMLYPNPWPKPQHLQRRWHGHPVFPLLLRLGGVLELRSNWQVYADEHAYALQALTGAA 184 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig81550.19498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig81550.19498.1 >prot_Ecto-sp13_S_contig81550.19498.1 ID=prot_Ecto-sp13_S_contig81550.19498.1|Name=mRNA_Ecto-sp13_S_contig81550.19498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp LWVLASRDNAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVIback to top mRNA from alignment at Ecto-sp13_S_contig81550:3..605- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig81550.19498.1 ID=mRNA_Ecto-sp13_S_contig81550.19498.1|Name=mRNA_Ecto-sp13_S_contig81550.19498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=603bp|location=Sequence derived from alignment at Ecto-sp13_S_contig81550:3..605- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig81550:3..605- >mRNA_Ecto-sp13_S_contig81550.19498.1 ID=mRNA_Ecto-sp13_S_contig81550.19498.1|Name=mRNA_Ecto-sp13_S_contig81550.19498.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=603bp|location=Sequence derived from alignment at Ecto-sp13_S_contig81550:3..605- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |