prot_Ecto-sp13_S_contig8139.19480.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8139.19480.1
Unique Nameprot_Ecto-sp13_S_contig8139.19480.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length574
Homology
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 728 bits (1879), Expect = 1.180e-258
Identity = 431/527 (81.78%), Postives = 438/527 (83.11%), Query Frame = 0
Query:    1 MSGRAMPFQFHTRRPSAVVRQSGPGRSTLHVDLAAAGGATTAXXXXXXXXXXXXXXXGDAGRGRGAGGWRGRRGWWGSSRRLPDFLEFWGLVAAVPEDERLRRERERRERSHHLRGPVGSCLRSPEFSIVVLGLAALLAFIVFICDMIAGRRLRPISVLVFVAAGTYCLALIKQRRDLAASEQALVIEIMDGSATSSSRRVMSKEDRRKLFDYFTFRPSSSTYKGVWTAVTATQTDTDVEVSAMEQGTAAPTXXXXXXXXXXDDDGRVSGVGDGSDRGDKYGSPRSWSLPSPLGLSAPTHGPGGAGSDTAAPPSPAQPLATPPVSPSALALAGTLQGEGAAVAVGGVADDGTAEVLAGVEVVEESGKDEREGVMMLAQSSGAAAGLSPFFSVASGRDEGESAIRGSCCGAGVADSDESG----GGRSAVAGPEKRPPPEGEEFDDKEVPERGMTGGLSELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNSSDNGE 523
            MSGR MPFQFHTRRPSAVVRQSGPGRSTLHVDLAA       XXXXXXXXXXXXXXX                  WGSSRRLPDFLEFWG  AAVPEDERLRRERE     H  RG  GSC+RSPEFSI VLGLAALLAFIVFICDMI GRRLRP SVLVFVAAGTYCLALIKQ+RDLAASEQALVIEIMDGSATSSSRRV+SKEDRR LFDYFTFR SSST KGVWTA TATQTD D EVSAMEQGTAAPT XXXXXXXXX       G GD SDR D+ GSPR  SLPSPLGLSAPT GP GAGSDTAAPPSP QPLATPPVSPSALALAGTLQGEGAA AVGGVAD         VEVV  SGK+E  GVMMLA SSGAAAGLSP FSVA GRDEGESAIRGSCCG GVADSDESG    G + +VAGPEKRPPPEGEEFDDKEVPERGMTGGLSELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRN SDN E
Sbjct:    1 MSGRTMPFQFHTRRPSAVVRQSGPGRSTLHVDLAAGXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXWGSSRRLPDFLEFWGFAAAVPEDERLRREREXXXXXHRRRGLAGSCVRSPEFSIFVLGLAALLAFIVFICDMITGRRLRPTSVLVFVAAGTYCLALIKQQRDLAASEQALVIEIMDGSATSSSRRVISKEDRRNLFDYFTFRRSSSTNKGVWTAATATQTDKDAEVSAMEQGTAAPTAXXXXXXXXXXXXXXXXGGGDTSDREDEAGSPRPCSLPSPLGLSAPTRGPRGAGSDTAAPPSPEQPLATPPVSPSALALAGTLQGEGAAAAVGGVADXXXXXXXXXVEVVGVSGKEEGGGVMMLAPSSGAAAGLSPLFSVALGRDEGESAIRGSCCGGGVADSDESGEGGSGSKPSVAGPEKRPPPEGEEFDDKEVPERGMTGGLSELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNGSDNDE 518          
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: A0A6H5KVF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF8_9PHAE)

HSP 1 Score: 486 bits (1251), Expect = 2.310e-165
Identity = 301/394 (76.40%), Postives = 316/394 (80.20%), Query Frame = 0
Query:    1 MSGRAMPFQFHTRRPSAVVRQSGPGRSTLHVDLAAAGGATTAXXXXXXXXXXXXXXXGDAGRGRGAGGWRGRRGWWGSSRRLPDFLEFWGLVAAVPEDERLRRERERRERSHHLRGPVGSCLRSPEFSIVVLGLAALLAFIVFICDMIAGRRLRPISVLVFVAAGTYCLALIKQRRDLAASEQA--LVIEIMDGSATSSSRRVMSKEDRRKLFDYFTFRPSSSTYKGVWTAVTATQTDTDVEVSAMEQGTAAPTXXXXXXXXXXDDDGRVSGVGDGSDRGDKYGSPRSWSLPSPLGLSAPTHGPGGAGSDTAAPPSPAQPLATPPVSPSALALAGTLQGEGAAVAVGGVADDGTAEVLAGVEVVEESGKDEREGVMMLAQSSGAAAGLSPFFSV 392
            MSGR M FQFHTR PSAVVRQSGP RSTLHVDLAAA G TTA      XXXXXXXXX          GWRGRRGWWGSSRRLP+FLEFWGL AAVPE ERLRRERERRERSH+ RGPVGSC+RSPEFSI VLGLAALLAF+VF CDMIAGRRLRP SVLVFVAAGTYCLAL+KQ+RDLAA E+A  LV+E+MDGSATSSSRRV+SKEDRR LFDYFTFR SSS  KG WTA   TQTD  ++VS ME+GTAA      XXXXXX   G VS VGD SDR DK  SPRS+ LPSPLGL APT G G    DTAAPPSP Q LA  PVSPS LALAGTLQGEGAA AVGGVADDGT EVL GVEVVE SGKD+  GVMMLA SSGAAAGLSP FSV
Sbjct:   26 MSGRTMSFQFHTRGPSAVVRQSGPERSTLHVDLAAADGETTAATGAAAXXXXXXXXXXXX-------GWRGRRGWWGSSRRLPNFLEFWGLAAAVPEGERLRRERERRERSHNRRGPVGSCVRSPEFSIFVLGLAALLAFMVFFCDMIAGRRLRPTSVLVFVAAGTYCLALLKQQRDLAALERAPALVVEVMDGSATSSSRRVISKEDRRNLFDYFTFRRSSSANKGAWTA---TQTDIGIDVSTMEKGTAALAAAPMXXXXXXXXXGGVSVVGDRSDREDKSVSPRSFPLPSPLGLPAPTRGSGXXXXDTAAPPSPEQQLAASPVSPSTLALAGTLQGEGAAAAVGGVADDGTTEVLGGVEVVEVSGKDDGGGVMMLAPSSGAAAGLSPLFSV 409          
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 2.560e-71
Identity = 117/136 (86.03%), Postives = 121/136 (88.97%), Query Frame = 0
Query:  393 ASGRDEGESAIRGSCCGAGVADSDESGGGRS----AVAGPEKRPPPEGEEFDDKEVPERGMTGGLSELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNSSDNGET 524
            ASGRDEGESAIRGSCCG GVA+SDE GGG S    +VAGPEKRPP EG EFDDK+V ERGMTG LSELWS  ESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLD PGHSWCPLCKSSLL PSEPRNSS+NGET
Sbjct:    4 ASGRDEGESAIRGSCCGGGVANSDECGGGGSGSKPSVAGPEKRPPLEGGEFDDKDVRERGMTGRLSELWSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLLLPSEPRNSSENGET 139          
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 4.190e-17
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0
Query:  458 SSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPS---EPRNSSDN 521
            S+G SCI+CFG+Y  G+ LCRL C H YHA+CID WLDG  H WCPLCK+ ++  S   +P  SS+N
Sbjct:  247 STGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSNN 313          
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.900e-15
Identity = 41/83 (49.40%), Postives = 50/83 (60.24%), Query Frame = 0
Query:  447 RGMTGGLSELWSSGE-----SCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPS---EPRNSSDN 521
            R   GG+    + GE     SCI+CFG+Y  G+ LCRL C H YHA+CID WLDG  H WCPLCK+ ++  S    P  SS N
Sbjct:  238 RTDAGGVLGEEAKGEGSTRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIISTSGYLNPAGSSIN 320          
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.970e-15
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  457 WSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSL---LPPSEPRNS 518
            WS+G++CI+CFG+Y  GD L RLPCRH YHA+CID WLD      CPLCK+ L    PP +P  S
Sbjct:  253 WSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRS 317          
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.820e-14
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  457 WSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNSS 519
            WS+G++CI+CF +Y  GD L RLPCRH YHA+CID WLD      CPLCK+ L   + P + S
Sbjct:  153 WSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDRS 215          
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.080e-13
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  457 WSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEPRNSS 519
            WS+G++CI+CFG+Y  GD L  LPCRH YHA+CID WLD      CPLCK+ L   + P + S
Sbjct:  346 WSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDLRHATPPDDRS 408          
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: A0A383WLA2_TETOB (RING-type domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WLA2_TETOB)

HSP 1 Score: 71.2 bits (173), Expect = 2.550e-10
Identity = 34/59 (57.63%), Postives = 38/59 (64.41%), Query Frame = 0
Query:  458 SSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWL----DGPGHSWCPLCKSSLLPP 512
            SSG SC IC  +YA GDV+  LPC+H YH ECID WL    D      CPLC +SLLPP
Sbjct:  166 SSGASCSICCEDYAGGDVVRVLPCKHRYHVECIDRWLLSSSDCSRLPACPLCNASLLPP 224          
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Match: A0A8K0G2N6_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0G2N6_9COLE)

HSP 1 Score: 70.9 bits (172), Expect = 3.060e-10
Identity = 29/53 (54.72%), Postives = 35/53 (66.04%), Query Frame = 0
Query:  459 SGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLP 511
            S E+C ICFGEY E  +LC+LPC H YH +CI  W D      CPLC+ S+LP
Sbjct:  169 SDENCAICFGEYVEQQLLCKLPCNHFYHYDCISKWFDE--KYICPLCRMSVLP 219          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8139.19480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQW5_ECTSI1.180e-25881.78RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KVF8_9PHAE2.310e-16576.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUH7_9PHAE2.560e-7186.03RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LSX3_ECTSI4.190e-1756.72RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE2.900e-1549.40RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI2.970e-1556.92RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE1.820e-1453.97RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI2.080e-1353.97RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A383WLA2_TETOB2.550e-1057.63RING-type domain-containing protein n=1 Tax=Tetrad... [more]
A0A8K0G2N6_9COLE3.060e-1054.72Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 463..505
e-value: 7.4E-6
score: 35.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 462..506
e-value: 2.6E-9
score: 37.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 463..506
score: 11.781
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 440..512
e-value: 1.5E-15
score: 58.6
NoneNo IPR availablePANTHERPTHR45969FAMILY NOT NAMEDcoord: 439..520
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..154
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 173..573
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..128
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 455..512
NoneNo IPR availableTMHMMTMhelixcoord: 128..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8139contigEcto-sp13_S_contig8139:2160..6799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8139.19480.1mRNA_Ecto-sp13_S_contig8139.19480.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8139 334..6799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8139.19480.1 ID=prot_Ecto-sp13_S_contig8139.19480.1|Name=mRNA_Ecto-sp13_S_contig8139.19480.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=574bp
MSGRAMPFQFHTRRPSAVVRQSGPGRSTLHVDLAAAGGATTAAAGAAAAR
AAARAAAGDAGRGRGAGGWRGRRGWWGSSRRLPDFLEFWGLVAAVPEDER
LRRERERRERSHHLRGPVGSCLRSPEFSIVVLGLAALLAFIVFICDMIAG
RRLRPISVLVFVAAGTYCLALIKQRRDLAASEQALVIEIMDGSATSSSRR
VMSKEDRRKLFDYFTFRPSSSTYKGVWTAVTATQTDTDVEVSAMEQGTAA
PTAAAAAAAAAADDDGRVSGVGDGSDRGDKYGSPRSWSLPSPLGLSAPTH
GPGGAGSDTAAPPSPAQPLATPPVSPSALALAGTLQGEGAAVAVGGVADD
GTAEVLAGVEVVEESGKDEREGVMMLAQSSGAAAGLSPFFSVASGRDEGE
SAIRGSCCGAGVADSDESGGGRSAVAGPEKRPPPEGEEFDDKEVPERGMT
GGLSELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHS
WCPLCKSSLLPPSEPRNSSDNGETGDGGGTNATTTSADSNTEQLGSPATA
AAAAAAAGAAPAAGAANVGDEAV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD