prot_Ecto-sp13_S_contig8114.19456.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8114.19456.1
Unique Nameprot_Ecto-sp13_S_contig8114.19456.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length394
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8114.19456.1 vs. uniprot
Match: A0A6H5KNX0_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX0_9PHAE)

HSP 1 Score: 501 bits (1290), Expect = 4.080e-165
Identity = 280/308 (90.91%), Postives = 285/308 (92.53%), Query Frame = 0 
Query:   53 MWSLMKLATPVKSPGLRAACGDNSAGGAAGNSAGGTEMTPVSLFNKSRQPGEMGGQLQSPFQSPFKNFQFSPSCLFSPPGAGTLDFPLAGGDTPGPASSSRSDIWQQMTPDRRSNQRGGGKAVRVGGAGDVQAGGGISEXXXXXXXXXXXXXXXXXXXXXXDVGSTTPGSCGKRKGKALFTDKRGPQDHHHSHALGGGGQGWCLGTPMRPVRESGVVHXXXXX--LGSVADIPATPERTTGADGSQVLPPTPQLLPPTTPSRASREATDAAXXXXGDDAAGILMGLRSPESLSFNGNIEHALFSGLDG 358
            MWSLMKLATPVKSPGLRAACGDNSAGGAAGNSAGGTE+TPVSLFNKSRQPGEMGGQLQSPFQSPFKNFQFSPSCLFSPPGAGTLDFPLAGGDTPGPASSSRSDIWQQMTPDRRSNQRGGGKAVR G AGDVQA GG+SE         XXXXXXXXXXXXXDVG+TTPGSCGKRKGKALFTDKRGPQDHHHSHALGGGGQ WCLGTPMRPVRESGVVHXXXXX  LG VADIP TP+RTTGADGSQ+LPPTPQLLP  TPSRASREATDA XXXX  DAAGILMGLRSPESLSFNGNIEHALFSG DG
Sbjct:    1 MWSLMKLATPVKSPGLRAACGDNSAGGAAGNSAGGTEITPVSLFNKSRQPGEMGGQLQSPFQSPFKNFQFSPSCLFSPPGAGTLDFPLAGGDTPGPASSSRSDIWQQMTPDRRSNQRGGGKAVRAGSAGDVQASGGVSEDGGVVAGVAXXXXXXXXXXXXXDVGNTTPGSCGKRKGKALFTDKRGPQDHHHSHALGGGGQAWCLGTPMRPVRESGVVHXXXXXXXLGGVADIPTTPDRTTGADGSQILPPTPQLLPXXTPSRASREATDAXXXXXXXDAAGILMGLRSPESLSFNGNIEHALFSGFDG 308
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BLAST of mRNA_Ecto-sp13_S_contig8114.19456.1 vs. uniprot
Match: D7FRF0_ECTSI (Tesmin-like, animal TCX proteins are associated with development of both male and female reproductiv n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF0_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 2.160e-100
Identity = 182/197 (92.39%), Postives = 185/197 (93.91%), Query Frame = 0 
Query:   34 MENPGTPTRKPSSGKEEDAMWSLMKLATPVKSPGLRAACGDNSAGGAAGNSAGGTEMTPVSLFNKSRQPGEMGGQLQSPFQSPFKNFQFSPSCLFSPPGAGTLDFPLAGGDTPGPASSSRSDIWQQMTPDRRSNQRGGGKAVRVGGAGDVQAGGGISEXXXXXXXXXXXXXXXXXXXXXXDVGSTTPGSCGKRKGKA 230
            MENPGTPTRKPSSGKEEDAMWSLMKLATPVKSPGLRAACGDNSAGGAAGNSAGGTEMTPVSLFN SRQPGEMGGQLQSPFQSPFKNFQFSPSCLFSPPGAGTLDFPLAGGDTPGPASSSRSDIWQ MTPDRR+NQRGGGKAVRVGGAGD+QAGGG+ E    XXXXXXXXXXXXXXX   DVGST PGSCGKRKG A
Sbjct:    1 MENPGTPTRKPSSGKEEDAMWSLMKLATPVKSPGLRAACGDNSAGGAAGNSAGGTEMTPVSLFNMSRQPGEMGGQLQSPFQSPFKNFQFSPSCLFSPPGAGTLDFPLAGGDTPGPASSSRSDIWQHMTPDRRANQRGGGKAVRVGGAGDIQAGGGVGEDGGVXXXXXXXXXXXXXXX---DVGSTAPGSCGKRKGAA 194
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8114.19456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNX0_9PHAE4.080e-16590.91CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FRF0_ECTSI2.160e-10092.39Tesmin-like, animal TCX proteins are associated wi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8114contigEcto-sp13_S_contig8114:1436..4253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8114.19456.1mRNA_Ecto-sp13_S_contig8114.19456.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8114 778..4253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8114.19456.1 ID=prot_Ecto-sp13_S_contig8114.19456.1|Name=mRNA_Ecto-sp13_S_contig8114.19456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=394bp
MPEEEGGHEDCGVISRCSSAAASAAAVFSSRGGMENPGTPTRKPSSGKEE
DAMWSLMKLATPVKSPGLRAACGDNSAGGAAGNSAGGTEMTPVSLFNKSR
QPGEMGGQLQSPFQSPFKNFQFSPSCLFSPPGAGTLDFPLAGGDTPGPAS
SSRSDIWQQMTPDRRSNQRGGGKAVRVGGAGDVQAGGGISEDGGVVVGVA
ASGGGVGGGGSGGDVGSTTPGSCGKRKGKALFTDKRGPQDHHHSHALGGG
GQGWCLGTPMRPVRESGVVHHHHHHLGSVADIPATPERTTGADGSQVLPP
TPQLLPPTTPSRASREATDAAAAAGGDDAAGILMGLRSPESLSFNGNIEH
ALFSGLDGDGDGDGGGGTGEGGGVGGGGHRGMVERGWSDEWSSS
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