mRNA_Ecto-sp13_S_contig8067.19407.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: D7FY73_ECTSI (Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY73_ECTSI) HSP 1 Score: 786 bits (2029), Expect = 5.300e-280 Identity = 407/448 (90.85%), Postives = 415/448 (92.63%), Query Frame = 1
Query: 1 QKWHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPSLEGALQPQQSATSEDGEVLTATGVSDRRRERQGHPLQPFCSRGVSGADVSGEGGRSDSLRSGSSGFSLGGAFXXXXXXXXXKGRRGRHPKFRLPFMSCLGLGRRTPSTSSPSALQSCERPPAARAEEGLVAADGGVEVGQPSTAAATRAAGGHKGR 1344
+KWHY EDISPEFCMALSLLHRAYGCR+QETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGE ALFALMELQPGAY IK+HIPGQFISIETLAQDQ+ XXXXXXXXXXPSLAEGGGWRE GAGWEHL RGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPSLEGALQPQQSATSEDGEVLTATGVSDRRR+RQGHPLQP CSRG+SG DVSG GGRSDSLRSGSSGFSLGGAF KGRRGRHPKFRLPFMSCLGLGRRTPS SSPSAL+SCERPPAARAEEGLVAA GGVE S A GG + R
Sbjct: 251 EKWHYHEDISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEEALFALMELQPGAYTIKEHIPGQFISIETLAQDQDHXXXXXXXXXXPSLAEGGGWREGGAGWEHLCRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPSLEGALQPQQSATSEDGEVLTATGVSDRRRDRQGHPLQPLCSRGISGVDVSGGGGRSDSLRSGSSGFSLGGAFSGVGLGTEGKGRRGRHPKFRLPFMSCLGLGRRTPSRSSPSALRSCERPPAARAEEGLVAAAGGVEASMLSLTLDRGARGGSEAR 698
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: A0A6H5KB73_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB73_9PHAE) HSP 1 Score: 757 bits (1954), Expect = 7.420e-269 Identity = 383/429 (89.28%), Postives = 395/429 (92.07%), Query Frame = 1
Query: 1 QKWHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPSLEGALQPQQSATSEDGEVLTATGVSDRRRERQGHPLQPFCSRGVSGADVSGEGGRSDSLRSGSSGFSLGGAFXXXXXXXXXKGRRGRHPKFRLPFMSCLGLGRRTPSTSSPSALQSCERPPAARAEEGLVAADGGVE 1287
+KWHY+EDISPEFCMALSLLHRAYGCR+QETGH+TVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETL QD + SLAEG GWRE GAGWEHL RGPPGRTLEFACGNLFDVT+LAQADLVLLETDVSSD+HPQLSRFLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPSLEGALQPQQSATSEDGEVLTATGVSDRRR+RQGHPLQPFCS+G+SG DV+G GGRSDSLRSGSSGFSLGG+F KGRR RHPKFRLPFMSCLGLGRRTPS SS SA QSCERP AARAEEGLVAA GGVE
Sbjct: 248 EKWHYEEDISPEFCMALSLLHRAYGCRVQETGHRTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLDQDHKQQQL--------SLAEGDGWREGGAGWEHLCRGPPGRTLEFACGNLFDVTHLAQADLVLLETDVSSDIHPQLSRFLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPSLEGALQPQQSATSEDGEVLTATGVSDRRRDRQGHPLQPFCSKGISGVDVNGVGGRSDSLRSGSSGFSLGGSFFGVGLGGEGKGRRVRHPKFRLPFMSCLGLGRRTPSASS-SARQSCERPRAARAEEGLVAAAGGVE 667
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: A0A7S4DH00_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH00_HETAK) HSP 1 Score: 286 bits (731), Expect = 1.260e-88 Identity = 153/293 (52.22%), Postives = 183/293 (62.46%), Query Frame = 1
Query: 1 QKWHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPSL 879
+ WHY EDI+ E+ A S+L + Y R QETGHKT GH CVT+ D+ A++ KGSLLYGELLPRGVNKA+G LNAA A +YDLGMG GKVAMQ FLQFP+L RVYG+ELS+AR+EL AL L+ L P AY I + PG+ + A GGG GR LEFA GN FD + + D+VL ETDV+ D + LS + M++G+ LTYLDLRKMW PFP+RQ+ N LSDRFPTSWSV RGHHFFLW K PSL
Sbjct: 173 EDWHYCEDITIEYAHAQSVLQKVYEGRAQETGHKTAGHLCVTEEDRALAKQSKGSLLYGELLPRGVNKALGRGCLNAADARVVYDLGMGLGKVAMQAFLQFPHLARVYGVELSKARYELAALALRRLVALFPEAYCIAEEEPGRRTVLR---------------------ARGGG----------------GRELEFAAGNFFDTPRMEEVDVVLFETDVAQDSYWDLSILMHKMKEGARTLTYLDLRKMWEYPPFPFRQLPGNLPLSDRFPTSWSVQRGHHFFLWAKGAPSL 428
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: A0A7S3ZW16_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW16_9STRA) HSP 1 Score: 259 bits (663), Expect = 1.150e-78 Identity = 141/292 (48.29%), Postives = 175/292 (59.93%), Query Frame = 1
Query: 1 QKWHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWS--SLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKIL 870
+ W + ED+S F A S+LH YG R QETGHKT+GH CVTD D+ A E +GSLLYGELLPRGV+KA+ RHL+AA+AS++YDLG GTGKVA+Q FLQFPNL RVYG+ELS ARF + E AL AL I + PG SIE + D RTL GNL ++ A +V+LET+V +D + SR L ++G LTYLDLR++W PFP+RQ+E NRS +DR+PTSWSV RGHH FLW K+L
Sbjct: 125 EPWTFAEDLSLAFAKAQSVLHDCYGGRTQETGHKTLGHVCVTDDDRRRATEDRGSLLYGELLPRGVHKALDARHLDAARASSVYDLGCGTGKVALQAFLQFPNLKRVYGVELSLARFHVAERALLALAARDDCDAHITRREPGS--SIEVTSVD--------------------------------------RTLIIEHGNLMRTRDVGDASIVMLETEVPADTFGEFSRLLDACKEGCRLLTYLDLRRVWRLPGQPFPFRQLEANRSFADRYPTSWSVQRGHHLFLWVKVL 376
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: A0A7S3NGR3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGR3_9STRA) HSP 1 Score: 259 bits (663), Expect = 1.120e-77 Identity = 135/292 (46.23%), Postives = 179/292 (61.30%), Query Frame = 1
Query: 1 QKWHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWS--SLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKIL 870
+ W + ED+S + A S LH YG R+QETGHKTVGHTCVT+ DK A + +GSLLYGELLPRGVNKA+ RH++A +A+ ++DLGMGTGKV MQ FLQFPNL RVYG+ELS AR+ L E A L Q H P + +E D L + G+++E A GNLF ++ AD+++LET++ +D + + + L ++G+ LTYLDLRK+W PFP+RQ+E NRS +DR+PTSWSV+RGHH FLW K+L
Sbjct: 141 EAWTFAEDLSLLYAKAQSTLHECYGSRVQETGHKTVGHTCVTEEDKRRASQNRGSLLYGELLPRGVNKALDERHMDARRATILFDLGMGTGKVPMQAFLQFPNLKRVYGVELSVARYRLAEKAYLNLANDQ-------SHEPD--VQLERRGLDSMV----------------------------LSKSSTGQSIEIAFGNLFHTRDIETADIIMLETEIPTDAYQKFAALLDAAKEGARILTYLDLRKVWQLPGRPFPFRQLESNRSFADRYPTSWSVNRGHHLFLWVKVL 395
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: A0A7S2SB25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB25_9STRA) HSP 1 Score: 254 bits (650), Expect = 1.100e-73 Identity = 130/289 (44.98%), Postives = 183/289 (63.32%), Query Frame = 1
Query: 1 QKWHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQP-GAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHK 864
+KW++ EDIS E+ A +++HR +G +I ETGH+TVGH C+++ D+ A++ K S+LYGELLP+GVN+A+ HL+ S++ DLGMGTGKV +Q FLQ+ NL V G+ELS +RF + EAAL L L P G + I H PG+ I + + + ++ A G R +G PPGR L NLF+V+ L+ AD VLLETD+ S++ L+ L M+KG+ L+YLD RK+W P+ Q+E+N+S DRFPTSWSV RGHHF++W K
Sbjct: 230 EKWNFCEDISHEYIQAQTVVHRVFGNKIHETGHRTVGHMCLSEEDRQLAKKTKCSMLYGELLPKGVNRALDAAHLHVKAGSSLVDLGMGTGKVVVQAFLQYSNLNYVLGVELSSSRFRVAEAALLKLKNLHPPGKFEIVCHRPGREIVLREVPKKEQIEGVASSTAASCVDAPWPGARGKGI--------PPGRYLHLERKNLFEVSELSSADFVLLETDIPSELLIDLACLLYQMKKGARVLSYLDFRKLWDVTAMPFSQLEINKSSMDRFPTSWSVQRGHHFYVWTK 510
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: A0A8J2WX67_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX67_9STRA) HSP 1 Score: 253 bits (646), Expect = 3.800e-73 Identity = 137/293 (46.76%), Postives = 175/293 (59.73%), Query Frame = 1
Query: 1 QKWHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQA-DLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWS--SLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKIL 870
+ W + ED+S F A S+LH YG R QETGHKT+GH CVTD D+ A E +GSLLYGELLPRGV+KA+ RHL+AA+AS++YDLG GTGKVA+Q FLQFPNL RVYG+ELS ARF + E AL AL I + PG I + ++ + A G W+ G + V + A +V+LET+V +D + SR L ++G LTYLDLR++W PFP+RQ+E NRS +DR+PTSWSV RGHH FLW K+L
Sbjct: 125 EPWTFAEDLSLAFAKAQSVLHDCYGGRTQETGHKTLGHVCVTDDDRRRATEDRGSLLYGELLPRGVHKALDARHLDAARASSVYDLGCGTGKVALQAFLQFPNLKRVYGVELSLARFHVAERALLALAARDDCDAHITRREPGSSIEVTSVDRTLIIEHGNLMRTRDVGDASGAAWKSTG---------------------VCRVEGVEVAPSIVMLETEVPADTFGEFSRLLDACKEGCRLLTYLDLRRVWRLPGQPFPFRQLEANRSFADRYPTSWSVQRGHHLFLWVKVL 396
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: A0A7S0SP71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SP71_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.670e-72 Identity = 139/289 (48.10%), Postives = 180/289 (62.28%), Query Frame = 1
Query: 7 WHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMEL-QPGAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWS--SLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHK 864
W Y ED++ EF SLL + YG IQETGHKT GH CVTD DK AR KGSLLYGELLPRG NKA P+ L+A A+ ++DLGMGTGK+A+Q FLQF NL VYG+ELS R+ L E A ++++ + + H PG+ I I + E ++ + + + R R L C ++F+VTN+ AD+V+LETD+ +++HP L R L M GS LTYLD+RK+WS SL F ++Q+E N+ LSDRFPTSWSV RGHHFFLW K
Sbjct: 175 WVYVEDLTLEFAFVQSLLFKIYGASIQETGHKTKGHVCVTDSDKERARVGKGSLLYGELLPRGANKAFSPKRLSAESATCLFDLGMGTGKIAIQAFLQFRNLRYVYGVELSVGRYLLAEEAAQRMVKIIGEDKFNVICH-PGKRIIISEIPNIDEEVSSTSSKSLLSNVNNNKLVDDYYSCFSDSCRKE--RVLHLECNDMFNVTNIEIADIVMLETDIPNELHPNLCRLLDRMHDGSKTLTYLDIRKLWSIASLNFQFKQLECNKYLSDRFPTSWSVQRGHHFFLWIK 460
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: A0A4D9D5D5_9STRA (C2H2-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5D5_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.810e-71 Identity = 138/326 (42.33%), Postives = 178/326 (54.60%), Query Frame = 1
Query: 7 WHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLT--------------------------RVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWSSL----------PFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPS 876
W Y E+IS + A +++HRAYG RIQETGHKT GH CVT+ D+V A++ + SLLYGELLPRG+NKA+G L ++A +++LGMG GKVAMQVFLQF T RVYG+ELS ARF + EAA L P + I+ GQ I +E + G LE GNL V L +AD+VLLETD+ + VHP+L L M+ G+ A TYLDLR +W + FP+RQ+E+NRS+SDR+ TSWSV+RGHHF+LW K+L S
Sbjct: 178 WTYVEEISLGYARAQAIMHRAYGNRIQETGHKTRGHLCVTETDRVLAQDAQSSLLYGELLPRGINKALGDMRLRGSEAEVVFELGMGIGKVAMQVFLQFTGQTVTEIETEGTWDEGLEDGDPRRGGRLRRVYGVELSSARFFIAEAAAHRLCREYPRDFGIQAWERGQRIVVEKMGS--------------------------------------GAVLEMEVGNLLAVRGLDRADIVLLETDLGASVHPELCALLRSMKSGARAFTYLDLRSIWGAEGGVEGEVEAGTFPFRQLEINRSVSDRYATSWSVNRGHHFYLWMKVLES 465
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Match: A0A6U4GL22_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GL22_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.180e-67 Identity = 131/318 (41.19%), Postives = 177/318 (55.66%), Query Frame = 1
Query: 1 QKWHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLAQDQEXXXXXXXXXXXPSLAEGGGWREEGAGWEHLWRGPPGRTLEFACGNLFDVTNLAQADLVLLETDVSSDVHPQLSRFLTGMRKGSHALTYLDLRKMWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKI-----LPSLEGALQPQQSATSEDGEVLTA 939
+ + Y EDIS +FC+A S L+ YG R+QETGHKT GH C+T DK A LLYGELLPRGVNKA+ P L+A +T+ DLGMGTGK+ +Q FLQ+PNLT VYG+EL+++R+E+ A +L +L P +Y I + I + D + R LEF G++FD ++A AD+VLLETDV + H + L M S L+YLDL MW S +P+ Q NR L+DR+PTSWSV RGHHF+LW ++ P++ G + +S +V TA
Sbjct: 162 EHYDYVEDISEDFCLAQSRLYHIYGRRVQETGHKTSGHVCITMNDKEQANAAYSCLLYGELLPRGVNKALSPARLHAKTRTTLIDLGMGTGKICIQAFLQYPNLTFVYGVELAESRYEIAVNAARSLCKLFPTSYEITTD---ERTRIVVTSMDGKA-----------------------------------RKLEFELGSMFDTPHVATADIVLLETDVLTSCHEETCNMLRKMPPISMLLSYLDLEMMWDSDDYPFVQHRENRDLTDRYPTSWSVSRGHHFYLWMRVPDGRNFPNIRGTTWGPPAQSSSSPQVETA 441 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8067.19407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8067.19407.1 >prot_Ecto-sp13_S_contig8067.19407.1 ID=prot_Ecto-sp13_S_contig8067.19407.1|Name=mRNA_Ecto-sp13_S_contig8067.19407.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=451bp QKWHYQEDISPEFCMALSLLHRAYGCRIQETGHKTVGHTCVTDRDKVAARback to top mRNA from alignment at Ecto-sp13_S_contig8067:1..7039- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8067.19407.1 ID=mRNA_Ecto-sp13_S_contig8067.19407.1|Name=mRNA_Ecto-sp13_S_contig8067.19407.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7039bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8067:1..7039- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8067:1..7039- >mRNA_Ecto-sp13_S_contig8067.19407.1 ID=mRNA_Ecto-sp13_S_contig8067.19407.1|Name=mRNA_Ecto-sp13_S_contig8067.19407.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1353bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8067:1..7039- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |