mRNA_Ecto-sp13_S_contig8062.19401.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8062.19401.1
Unique NamemRNA_Ecto-sp13_S_contig8062.19401.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: D7FNX4_ECTSI (Putative anion:sodium symporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNX4_ECTSI)

HSP 1 Score: 479 bits (1233), Expect = 8.050e-167
Identity = 257/266 (96.62%), Postives = 259/266 (97.37%), Query Frame = 1 
Query:  202 MSHEQQAGRGRGESARGRRLSTLLSASAVVTGGSGLVETVEGLRGGGGDQAVAVKENKLFKAYETGARWFTNLFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            MS EQQAG   GESARGRRLSTLLSASAVV GGSGLVETVEGLRGGGGDQAVAVKENKLFKAYETGARWFTNLFPIWLCVFSG+ALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPI+VGMMTNKFFP  VKAVLPVTPVVGVLSTCFL
Sbjct:    1 MSQEQQAGGAWGESARGRRLSTLLSASAVVAGGSGLVETVEGLRGGGGDQAVAVKENKLFKAYETGARWFTNLFPIWLCVFSGIALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIVVGMMTNKFFPSVVKAVLPVTPVVGVLSTCFL 266
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: A0A836CI93_9STRA (Putative anion:sodium symporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI93_9STRA)

HSP 1 Score: 324 bits (831), Expect = 8.000e-107
Identity = 170/197 (86.29%), Postives = 183/197 (92.89%), Query Frame = 1 
Query:  409 FTNLFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            FTNLFP+WL +FS VALKDP++FAWFTTEYFT  LA+LMLSMGITLSP+DFVNVLKRPNAV+VGF FCY +MPALAY LGI AGLSPALLAGLVLVGCINGGQASNLCT+IANGNVALSVMMTTITTLGAIVMTPLLCKLLLG VVPVDA+GIA STV+VVLAPI VGM TNK+FP  VKAVLP+TPVVGVLSTCFL
Sbjct:   11 FTNLFPVWLTLFSAVALKDPAMFAWFTTEYFTGGLALLMLSMGITLSPRDFVNVLKRPNAVVVGFGFCYAVMPALAYGLGIAAGLSPALLAGLVLVGCINGGQASNLCTYIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGAVVPVDALGIARSTVEVVLAPIAVGMATNKYFPKLVKAVLPITPVVGVLSTCFL 207
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: A0A7S1XKP9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKP9_9STRA)

HSP 1 Score: 284 bits (727), Expect = 4.590e-90
Identity = 152/229 (66.38%), Postives = 174/229 (75.98%), Query Frame = 1 
Query:  316 TVEGLRGGGGDQAVAVKEN-KLFKAYETGARWFTNLFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            T +G    G   A A  E  K  KAY     W TNLFP+W  +F+  ALK P  FAWFTT+YFT  L +LMLSMGITLSP  FV +L RPNAV+VGF  CY+MMP LA+ALG    LSP L+AG+VLVG INGGQASNLCT+IANGNVALSV+MTT+TT GAIV TPLLCK+LLG VVPV+AVGIA ST+QVVLAPI +GM  NKFFP AVK+VLP+TPV+G  STC L
Sbjct:   61 TADGAMTAGETAAPAKPEKGKFMKAYLATTTWLTNLFPLWTVIFAAWALKAPEAFAWFTTDYFTGGLGILMLSMGITLSPDQFVRILARPNAVLVGFAGCYLMMPMLAFALGKAFALSPELVAGMVLVGSINGGQASNLCTYIANGNVALSVLMTTVTTFGAIVFTPLLCKVLLGAVVPVNAVGIAVSTIQVVLAPIFLGMTLNKFFPKAVKSVLPLTPVIGTFSTCLL 289
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: W7TNG8_9STRA (Bile acid:sodium symporter family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNG8_9STRA)

HSP 1 Score: 279 bits (713), Expect = 5.690e-88
Identity = 147/212 (69.34%), Postives = 172/212 (81.13%), Query Frame = 1 
Query:  364 KENKLFKAYETGARWFTNLFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            K+   F+ YE G+    NLFPIW  + SG+AL  P +FAWFTT+YFT  L +LMLSMGITLSP+DF +VLKRP+AV+VGF+FCY+ MPA AYA   G  LSP ++AGLVLVG INGGQASNLCT+IA G+VALSVMMTT TTLGAI MTPLLCK LLG +VPVDAVGIA STVQVVLAPI++GM+ NKF   AVKAVLP +PVVG++STC L
Sbjct:   95 KKMTAFEMYEKGSELIVNLFPIWTVLSSGLALYRPELFAWFTTKYFTWGLGLLMLSMGITLSPQDFADVLKRPSAVLVGFIFCYLFMPAFAYATAQGFALSPEMVAGLVLVGSINGGQASNLCTYIAKGDVALSVMMTTATTLGAIFMTPLLCKFLLGAIVPVDAVGIALSTVQVVLAPIVLGMLANKFLNRAVKAVLPFSPVVGMVSTCLL 306
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: A0A7S1BHR8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHR8_9STRA)

HSP 1 Score: 274 bits (701), Expect = 2.090e-87
Identity = 148/210 (70.48%), Postives = 163/210 (77.62%), Query Frame = 1 
Query:  370 NKLFKAYETGARWFTNLFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            +KLF  Y   A   T LFP+W  +F+G+ALK PS FAWFTTEYFTAALA LMLSMGITL P+DF  V KRPN+V + F  CY MMP LA  LG   GL  ALLAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TTLGAI MTPLLCK LLG +VPVDAVGIA ST+QVVLAPI VGM  NK FP  VKA+LP  PVVGV+STC L
Sbjct:   82 SKLFATYIRAASIATTLFPLWTVLFTGMALKSPSSFAWFTTEYFTAALAALMLSMGITLKPEDFAKVAKRPNSVFIQFALCYAMMPLLALFLGKACGLDSALLAGVVLVGSINGGQASNLCTYIAKGNVALSVLMTTATTLGAIFMTPLLCKTLLGAIVPVDAVGIAMSTIQVVLAPIAVGMFLNKNFPKVVKAILPFAPVVGVVSTCLL 291
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: A0A7R9UD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD67_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.210e-87
Identity = 139/209 (66.51%), Postives = 165/209 (78.95%), Query Frame = 1 
Query:  373 KLFKAYETGARWFTNLFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            K  KAY + + W TNLFP+W  +F+GVALK P  FAWFTTEYFTA L +LMLSMGITLSP DFV +++RPNA+++GF  CY+ MP LA  L  G  L PAL+AG+VLVG INGGQASNLC +IA G+VALSV+MTT TTLGAIV TPLLCK LLG VVPV+AVGIA ST+QVVLAPI++GM  NK FP   K + P+TPVVG ++TC L
Sbjct:   31 KFMKAYTSLSTWLTNLFPVWTILFAGVALKSPEAFAWFTTEYFTAGLGILMLSMGITLSPNDFVRIMQRPNAILLGFAGCYLFMPLLALGLAKGFALDPALVAGMVLVGSINGGQASNLCAYIAGGDVALSVLMTTATTLGAIVCTPLLCKQLLGAVVPVNAVGIAISTIQVVLAPIVIGMSFNKLFPKTTKKIEPLTPVVGTIATCLL 239
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: A0A448ZNR0_9STRA (Uncharacterized protein n=3 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZNR0_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.410e-86
Identity = 150/230 (65.22%), Postives = 175/230 (76.09%), Query Frame = 1 
Query:  310 VETVEGLRGGGGDQAVAVKENKLFKAYETGARWFTNLFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            VE      G GG++++     K+F  Y   A   T LFP+W  +FS  A+K P  FAWFTTEYFTAALA LMLSMGITL+P+DF++V+K P +V + F  CY MMPALA  LG    L PA+LAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TTLGAI MTPL+CK +LGTVVPVDAVGIA ST+QVVLAPI +GM TNKFFP  VK +LP+TPVVGVLSTC L
Sbjct:   61 VEAASEDAGAGGEKSLG---KKIFDTYVRVADVATTLFPLWTVLFSVAAIKTPQSFAWFTTEYFTAALAALMLSMGITLTPQDFLDVMKEPISVAMQFSLCYAMMPALALGLGKAFALDPAMLAGMVLVGSINGGQASNLCTYIARGNVALSVLMTTATTLGAIFMTPLICKAVLGTVVPVDAVGIAMSTIQVVLAPIAIGMTTNKFFPNFVKXILPITPVVGVLSTCLL 287
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: A0A6U2HAE6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2HAE6_9STRA)

HSP 1 Score: 273 bits (697), Expect = 4.790e-86
Identity = 145/209 (69.38%), Postives = 163/209 (77.99%), Query Frame = 1 
Query:  373 KLFKAYETGARWFTNLFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            K+FKAY   A   T LFP+W  + SG+ALK+PS F+WFTTEYFTA LA LMLSMGITL P DF  V  RPNAV++ F  CY MMP LA ALG    L PALLAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TTLGAI MTPLLCK LLG VVPVDA GIA ST+QVVLAPI +GM+TN +FP  V+ +LP  PVVGV+STC L
Sbjct:   34 KIFKAYTQTANVATTLFPVWTVICSGIALKNPSAFSWFTTEYFTAGLAALMLSMGITLKPSDFAKVASRPNAVLMQFSLCYAMMPLLALALGKAFALDPALLAGMVLVGSINGGQASNLCTYIARGNVALSVLMTTATTLGAIFMTPLLCKGLLGAVVPVDARGIAISTIQVVLAPIAIGMLTNSYFPAFVEKILPFAPVVGVVSTCLL 242
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: A0A7S1FU32_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FU32_9STRA)

HSP 1 Score: 274 bits (701), Expect = 5.150e-86
Identity = 148/210 (70.48%), Postives = 163/210 (77.62%), Query Frame = 1 
Query:  370 NKLFKAYETGARWFTNLFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            +KLF  Y   A   T LFP+W  +F+G+ALK PS FAWFTTEYFTAALA LMLSMGITL P+DF  V KRPN+V + F  CY MMP LA  LG   GL  ALLAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TTLGAI MTPLLCK LLG +VPVDAVGIA ST+QVVLAPI VGM  NK FP  VKA+LP  PVVGV+STC L
Sbjct:   82 SKLFATYIRAASIATTLFPLWTVLFTGMALKSPSSFAWFTTEYFTAALAALMLSMGITLKPEDFAKVAKRPNSVFIQFALCYAMMPLLALFLGKACGLDSALLAGVVLVGSINGGQASNLCTYIAKGNVALSVLMTTATTLGAIFMTPLLCKTLLGAIVPVDAVGIAMSTIQVVLAPIAVGMFLNKNFPKVVKAILPFAPVVGVVSTCLL 291
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BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Match: A0A7S1E294_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E294_9STRA)

HSP 1 Score: 268 bits (684), Expect = 4.200e-85
Identity = 143/194 (73.71%), Postives = 161/194 (82.99%), Query Frame = 1 
Query:  418 LFPIWLCVFSGVALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVGFVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANGNVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAPIIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL 999
            LFP+W  +F+G ALK P  FAWFTTEYFTAALA LMLSMGITL+PKDF +V   P +V + F  CY MMPALA+ LG   GLSPALLAG+VLVG INGGQASNLCT+IA GNVALSV+MTT TT+GAI MTPLLCK +LGTVVPVDAVGIA ST+QVVLAPI +GM  N+FFP  VKA+LP+TPVVGVLSTC L
Sbjct:    1 LFPLWTVLFTGWALKAPGDFAWFTTEYFTAALAALMLSMGITLTPKDFADVASEPKSVFMQFTLCYAMMPALAFGLGKMCGLSPALLAGMVLVGSINGGQASNLCTYIARGNVALSVLMTTATTVGAIFMTPLLCKAVLGTVVPVDAVGIAKSTLQVVLAPIALGMTANQFFPKFVKAILPITPVVGVLSTCML 194
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8062.19401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNX4_ECTSI8.050e-16796.62Putative anion:sodium symporter n=2 Tax=Ectocarpus... [more]
A0A836CI93_9STRA8.000e-10786.29Putative anion:sodium symporter n=1 Tax=Tribonema ... [more]
A0A7S1XKP9_9STRA4.590e-9066.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TNG8_9STRA5.690e-8869.34Bile acid:sodium symporter family protein n=2 Tax=... [more]
A0A7S1BHR8_9STRA2.090e-8770.48Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7R9UD67_9STRA2.210e-8766.51Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A448ZNR0_9STRA1.410e-8665.22Uncharacterized protein n=3 Tax=Pseudo-nitzschia T... [more]
A0A6U2HAE6_9STRA4.790e-8669.38Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1FU32_9STRA5.150e-8670.48Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S1E294_9STRA4.200e-8573.71Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8062contigEcto-sp13_S_contig8062:3354..7097 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score479.6
Seed ortholog evalue1.2e-132
Seed eggNOG ortholog2880.D7FNX4
Preferred nameBASS2
Model size999
KEGG koko:K03453
KEGG TC2.A.28
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006811,GO:0006820,GO:0006848,GO:0006849,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0009507,GO:0009526,GO:0009534,GO:0009536,GO:0009579,GO:0009941,GO:0015075,GO:0015318,GO:0015711,GO:0015718,GO:0015849,GO:0022857,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050833,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098656,GO:1901475,GO:1903825,GO:1905039
Exons4
EggNOG free text desc.bile acid:sodium symporter activity
EggNOG OGsCOG0385@1,KOG2718@2759
Cds size999
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464079.5271063-CDS-Ecto-sp13_S_contig8062:3353..38471681464079.5271063-CDS-Ecto-sp13_S_contig8062:3353..3847Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8062 3354..3847 +
1681464079.542549-CDS-Ecto-sp13_S_contig8062:5865..61241681464079.542549-CDS-Ecto-sp13_S_contig8062:5865..6124Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8062 5866..6124 +
1681464079.5597222-CDS-Ecto-sp13_S_contig8062:6393..65251681464079.5597222-CDS-Ecto-sp13_S_contig8062:6393..6525Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8062 6394..6525 +
1681464079.5705066-CDS-Ecto-sp13_S_contig8062:6983..70971681464079.5705066-CDS-Ecto-sp13_S_contig8062:6983..7097Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8062 6984..7097 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8062.19401.1prot_Ecto-sp13_S_contig8062.19401.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8062 3354..7097 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8062.19401.1

>prot_Ecto-sp13_S_contig8062.19401.1 ID=prot_Ecto-sp13_S_contig8062.19401.1|Name=mRNA_Ecto-sp13_S_contig8062.19401.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=333bp
MRVACAVACLLAAPEATSFHVSVQNALPRSGIAPFASRAPAAAAAVQRAT
AARRAAGPSIAAAAALRMSHEQQAGRGRGESARGRRLSTLLSASAVVTGG
SGLVETVEGLRGGGGDQAVAVKENKLFKAYETGARWFTNLFPIWLCVFSG
VALKDPSVFAWFTTEYFTAALAVLMLSMGITLSPKDFVNVLKRPNAVMVG
FVFCYIMMPALAYALGIGAGLSPALLAGLVLVGCINGGQASNLCTFIANG
NVALSVMMTTITTLGAIVMTPLLCKLLLGTVVPVDAVGIAFSTVQVVLAP
IIVGMMTNKFFPGAVKAVLPVTPVVGVLSTCFL
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mRNA from alignment at Ecto-sp13_S_contig8062:3354..7097+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8062.19401.1 ID=mRNA_Ecto-sp13_S_contig8062.19401.1|Name=mRNA_Ecto-sp13_S_contig8062.19401.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3744bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8062:3354..7097+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGGTTGCCTGTGCAGTTGCGTGCCTGTTGGCAGCACCTGAGGCAAC
TTCTTTCCACGTGTCCGTCCAGAATGCGCTCCCTCGCAGCGGAATCGCGC
CGTTCGCGTCGCGCGCGCCAGCTGCTGCTGCTGCTGTGCAGCGAGCAACA
GCCGCAAGGCGGGCAGCAGGACCATCGATAGCCGCAGCAGCAGCCTTGCG
CATGTCCCACGAGCAGCAGGCGGGCAGAGGAAGGGGCGAGAGTGCTCGGG
GGCGACGCCTGTCGACGCTGCTGTCGGCCTCGGCGGTGGTGACGGGTGGC
TCTGGGCTGGTCGAGACGGTGGAGGGCCTCAGGGGTGGCGGTGGCGACCA
GGCGGTGGCCGTCAAAGAGAACAAGTTGTTCAAGGCCTACGAGACGGGCG
CGCGGTGGTTCACCAACCTGTTCCCCATCTGGCTCTGCGTGTTCTCCGGC
GTTGCACTCAAGGATCCTTCGGTGTTTGCGTGGTTCACGACAGAGTGAGT
GGCGGTATTGTCGTGTTGTTGGCGCATTATTTGCTGCGGGCATCTGTCCC
TGTTTAGACACCAGGAAGGCAAAGCGCCGCATATCCAATGCTCGAAGAAT
CTCTTGCCCTCGGAGTTGGGCGCGTCATAATTTGTAGGAGCGACATGTGG
CACATGTTAAAGATCAGGTCACGCTGTCTACATTTGCCGGTCGCTGCGTG
TATATATGCATGCGAGCACACACAAGGGAAGCACAGCGTGGGAGCACAGC
TCTAGGCGCCACGAGTACCCTGTCTTGGCAGCGAGGAGACCGACTGTGCA
CAGGCACAACCCCCGCCCGAAGAAGGAACACACAATCAAATCGACGTTGC
ACAATGCGCATTTTTGCAGCGAAAGAGTTGAAAGGGCCCGACAGCGGACC
TGAAAATATAATTTTCAAACAGCTGCTGCTTGCGTCTCATGCTGAAGTTG
ACGGGGGCACGATGGTCGTAGTGGAACCCTGTAACGACCCACACGCCCAT
TGCACGCTCCCTCCTGGTACACTGCTGGTACACGGCATGCCCATGTCCAG
ACACGGCACGGCGGTTCAAACGTTAAGAATACGATTGCACAGCAGTTGGT
CCTTAGACATCGTCGGTTGAACAATGCCGGGTAACTGTACGGCTGTATCC
ATCTGTACCTGGTACAATGCCGATCAAGTCAGCCTGGCATGGCTGTAGCC
CGGTTTAGCGCTGGTCTCTGCGAGTCCTCCGTGGACTATGCCGCCAAAGG
TAGAAAATTCCCACACGCCTGCGGTCGCACTCCATGGTACGAAAATGTCT
CCGTGTGAAAATACGTATGGTCCCACGTGTCCAGGCGGAAATACTCCAAC
AAAGTGTGTTTTGTTGTTGCCTTCTGTTTCGGTCTTTGCTTCGTTTTCTA
ATACAAAACAACGGCGGTGTGTGTGTATTTTGAAATATGACGGGTGTTGC
GGTTTGTTTGTTTTTTCTTTTGAAAAGCCATATGAAAGCACTGCTGTGCG
CTGTGAACACGGATGGTCGAAACTACCAGCTGGTAAAATTTGTGTCGGTA
ATGGTGGGTGCCGCCCGTCGTACACCCGCGCCCATGATGCTCGACCTGGT
CGTGGTTCACAGAACATAAACAACCTGCCCACTTTTTCCATTCGTATTGT
GCTGTTCCCCGTGTTGATCGAAGGCAGGTTGTTCATCGTCCCGTTTGCGA
AGTCCCCCAAACAGCACACAGGACCGTACAAAACTCGAACGATTTCTTGA
GTAGTGTCGGGTCTGGCACTTTACCGGCACTACATTGAATGCCGTGTCTG
TAGCGCTTGCAACGTCGACACGCGCTCTAGCTCTGCTGTCGTCCATTTGC
CACATTCAAAGGCCGACAGAAAGCTAACTTTTCCCTTATTTTCTCGTGTA
CCCGACCCTTTTTTAGTACTCGCCTATTGAGCAGGGAAACAGCTAAATGA
ATCCTTGAGACGTTGCAATGATAAGCCATGCACCAAACCAAAGGAAAATG
TTCAGTTTGAGAGGTTGAACGCGAGCCCACCATCGATAATACTACTCGTG
TGTGCTTCCCGGGGGACGCTGCCAAAATGGTACAGGTGCTCTCTAGAATG
TCAACACAGACGAGGCGGAGAGTTTTACTGGCGTTGACGTCCGTCCTTAG
AAACTACGCCCTGCCTGGCGCCGTTTGTTGTCTTACAGATAAAGAAAAAC
TCAAGCACGCAAATGGATTTCCCTTGGGGTTAGAAAGCGGATGAACCATC
GTGTGTTGTCGTGTCGTGTGATCTTCCCTTACATGATAAACACCACAATC
CTATGATCCCTCCAACGTTGCTTTATGGCTTTTGTATCCCCGTCGGCATT
CACATCAGCAAGTATGGGTAGGGCCACGTCTCCGGCTCGTCGGCAGCGCG
GAAACAACGATTGTTTTTGCTTGGAGAAGTAGTAGGTAAAACGCCTTGCT
TCGCGATTATGACAACCCTTGTCTTACAACCACCGGTTCTCGGTTGTGCT
ACCTTCAACTAGGTACTTCACGGCAGCGTTGGCCGTTCTCATGCTCTCCA
TGGGCATCACCCTGAGCCCGAAGGACTTCGTGAACGTGCTCAAGAGGCCT
AACGCCGTGATGGTGGGCTTCGTGTTCTGCTACATCATGATGCCGGCGCT
GGCGTACGCTCTCGGCATCGGGGCGGGCCTCAGCCCCGCCCTGCTGGCGG
GGCTTGTGCTTGTTGGGTGTATCAACGGGGGGCAGGCTTCGAACCTTTGC
ACCTTCATCGCTAACGGAAACGTAAGCATTTTGGGCTGCTGCTGGTGTTC
GGTCGGGCAGGAGTTGCCTGGCTTTTGGTGTGAAGCTCTTTGACATGAGA
AGCACGTCGCGTCCGTCCGCATCCGCCTCGCTGCTTGTGCGGTATACGTA
GCCTGCGACGAGTATTTTTTGTCAACCTGCAAGTTTCAGGCTATCACACT
TCGTTTGTGCCAACACGTTCTTAGTCGAGGCAAAAGTCCTTGTTGGTGAC
CTTTTCGGGGGTGGGTGTGTCATGCGTGAACAAAACTCAGGTGGCCCTGT
CGGTGATGATGACGACCATCACCACGCTGGGAGCGATCGTCATGACCCCG
CTGCTGTGCAAGCTGCTGCTGGGCACGGTGGTCCCGGTCGACGCAGTCGG
CATCGCCTTCTCCACCGTTCAGGTACGTGCAAGTCGATATCTAGTCCGCG
CTATTTGGATATCGTGACGATCGCCGTCGCTCCCGAGATGCAAATAATTT
GTTATTCATGTGTGTAGTTTCCCCTGAAACGATGGAAATGTCCTGCCTGT
TGTTGGCTTGACACTCGGCTCACCACGCTATCTAAAGTGCACGTTTTGCT
ACATACGTACGTGCATGCGGCGGATTGGTTTCGCGAGTCCGGTACACAGC
AGTGACGGGGTTATATGAGATTCGCCCGAAGGGGTGGGGAAAGGTAGACA
ACGTTGTCGTACGCGAACAACCTTAACCTACCAACCCGTAAGATGCCTGT
ACAGTCAGCGTCATCTTCAACACGCATGTCGGTTAGCTTCGGAATAACCC
CCTGCTGCCCGCTGTAGTTGAATTTGGCCCTGCTTGATGCCGGCGGTGAC
GGCTGCTTCTGCGTTCTTTTTCTTTTTCAGGTTGTGCTGGCGCCCATCAT
TGTCGGCATGATGACCAACAAGTTTTTCCCCGGTGCGGTCAAGGCCGTGC
TCCCGGTGACCCCCGTGGTTGGCGTGCTGTCTACGTGCTTCCTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8062:3354..7097+

>mRNA_Ecto-sp13_S_contig8062.19401.1 ID=mRNA_Ecto-sp13_S_contig8062.19401.1|Name=mRNA_Ecto-sp13_S_contig8062.19401.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=999bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8062:3354..7097+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGGTTGCCTGTGCAGTTGCGTGCCTGTTGGCAGCACCTGAGGCAAC
TTCTTTCCACGTGTCCGTCCAGAATGCGCTCCCTCGCAGCGGAATCGCGC
CGTTCGCGTCGCGCGCGCCAGCTGCTGCTGCTGCTGTGCAGCGAGCAACA
GCCGCAAGGCGGGCAGCAGGACCATCGATAGCCGCAGCAGCAGCCTTGCG
CATGTCCCACGAGCAGCAGGCGGGCAGAGGAAGGGGCGAGAGTGCTCGGG
GGCGACGCCTGTCGACGCTGCTGTCGGCCTCGGCGGTGGTGACGGGTGGC
TCTGGGCTGGTCGAGACGGTGGAGGGCCTCAGGGGTGGCGGTGGCGACCA
GGCGGTGGCCGTCAAAGAGAACAAGTTGTTCAAGGCCTACGAGACGGGCG
CGCGGTGGTTCACCAACCTGTTCCCCATCTGGCTCTGCGTGTTCTCCGGC
GTTGCACTCAAGGATCCTTCGGTGTTTGCGTGGTTCACGACAGAGTACTT
CACGGCAGCGTTGGCCGTTCTCATGCTCTCCATGGGCATCACCCTGAGCC
CGAAGGACTTCGTGAACGTGCTCAAGAGGCCTAACGCCGTGATGGTGGGC
TTCGTGTTCTGCTACATCATGATGCCGGCGCTGGCGTACGCTCTCGGCAT
CGGGGCGGGCCTCAGCCCCGCCCTGCTGGCGGGGCTTGTGCTTGTTGGGT
GTATCAACGGGGGGCAGGCTTCGAACCTTTGCACCTTCATCGCTAACGGA
AACGTGGCCCTGTCGGTGATGATGACGACCATCACCACGCTGGGAGCGAT
CGTCATGACCCCGCTGCTGTGCAAGCTGCTGCTGGGCACGGTGGTCCCGG
TCGACGCAGTCGGCATCGCCTTCTCCACCGTTCAGGTTGTGCTGGCGCCC
ATCATTGTCGGCATGATGACCAACAAGTTTTTCCCCGGTGCGGTCAAGGC
CGTGCTCCCGGTGACCCCCGTGGTTGGCGTGCTGTCTACGTGCTTCCTC
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