prot_Ecto-sp13_S_contig8059.19395.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8059.19395.1
Unique Nameprot_Ecto-sp13_S_contig8059.19395.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length346
Homology
BLAST of mRNA_Ecto-sp13_S_contig8059.19395.1 vs. uniprot
Match: A0A6H5JMI3_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI3_9PHAE)

HSP 1 Score: 637 bits (1643), Expect = 2.280e-228
Identity = 329/344 (95.64%), Postives = 336/344 (97.67%), Query Frame = 0
Query:    1 GFLAQVYRNYKVLMLHTVDMLPPTVQILIVQAPMWVAAMFLLIPSVASFDFEANRCKGKARYVLLGAFNYAGLLVIGSVYLLWKMRDARRQMTEYRAMMLSLGSLLLTLAAVNLTAGKIAEDDTLTRRIALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFEKIAQERLPPALPGFYKAVMDRDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEAVRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRKGVGFDFDETQTYNSRSDRWTNSTVAA 344
            G + +VYRNYKVLMLHTVDMLPPTVQILIVQAPMWVAAMFLLIPSVASFDFEANRCKG AR+VLLGAFNYAGLLVIGSVYLLWKMRDARRQMTEYRAMM+SL SLL+ LAAVNLTAGKIAEDDTLTRRIALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALF KIA+ERLPPALPGFYKAVMDRDKEEGHFQRQAMTMDI+DTYIADNAVCRVDLTEA RDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRKGVGFDFDE QTYNSRSDRWTNSTVAA
Sbjct:   98 GAVVRVYRNYKVLMLHTVDMLPPTVQILIVQAPMWVAAMFLLIPSVASFDFEANRCKGNARHVLLGAFNYAGLLVIGSVYLLWKMRDARRQMTEYRAMMVSLVSLLVMLAAVNLTAGKIAEDDTLTRRIALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFGKIAEERLPPALPGFYKAVMDRDKEEGHFQRQAMTMDIIDTYIADNAVCRVDLTEACRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRKGVGFDFDERQTYNSRSDRWTNSTVAA 441          
BLAST of mRNA_Ecto-sp13_S_contig8059.19395.1 vs. uniprot
Match: D7FWB0_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB0_ECTSI)

HSP 1 Score: 591 bits (1524), Expect = 1.240e-211
Identity = 307/331 (92.75%), Postives = 311/331 (93.96%), Query Frame = 0
Query:   14 MLHTVDMLPPTVQILIVQAPMWVAAMFLLIPSVASFDFEANRCKGKARYVLLGAFNYAGLLVIGSVYLLWKMRDARRQMTEYRAMMLSLGSLLLTLAAVNLTAGKIAEDDTLTRRIALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFEKIAQERLPPALPGFYKAVMDRDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEAVRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRKGVGFDFDETQTYNSRSDRWTNSTVAA 344
            MLHTVDMLPPTVQILIVQAP+WVAAMFLLIPSVASFDFEANRCKG ARYVLLGAFNYAGLLVIGSVYLLWKMRDARRQMTEYRAMMLSL              G IA+DDTLTRRIALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFEKIA+ERL PALPGFYKAVM+RDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEA RDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRK VGFDFDE QTYNSRSDRWTNSTVAA
Sbjct:    1 MLHTVDMLPPTVQILIVQAPVWVAAMFLLIPSVASFDFEANRCKGNARYVLLGAFNYAGLLVIGSVYLLWKMRDARRQMTEYRAMMLSLXXXXXXXXXXXXXXGAIAQDDTLTRRIALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFEKIAEERLRPALPGFYKAVMERDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEACRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRKAVGFDFDERQTYNSRSDRWTNSTVAA 331          
BLAST of mRNA_Ecto-sp13_S_contig8059.19395.1 vs. uniprot
Match: D7G0B4_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B4_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 9.970e-47
Identity = 109/322 (33.85%), Postives = 179/322 (55.59%), Query Frame = 0
Query:    3 LAQVYRNYKVLMLHTVDMLPPTVQILIVQAPMWVAAMFLLIPS-VASFDFEANRCKGKARYVLLGAFNY--AGLLVIGSVYLLWKMRDARRQMTEYRAMMLSLGSLLLTLAAVNLTAGKIAEDDTLTRRI-ALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFEKIAQERLPPALPGFYKAVMDRDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEAVRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRKGV 320
            L +VYR++K+L+ H+V+M PP  Q+L++  P  + A+   I   ++ F+   N C+    Y  +  F Y     L+  +  L+++MR  R+QM EYR  +  L  LLLT + V      + ++    RRI  L +N +  L+LFWP I  P+ +Y   D  Y   ++ G     TPA ++ SL DQL +D+L   F+K A+ R+   LP FY+A +DRD+ E  F RQA T  I+D +I   +   +++++ +R++IL +E+T Y IF+EA +  + ++      AF+ S AY++L R    +  ++E L K N LP +  V
Sbjct:   50 LVRVYRSWKILIKHSVEMWPPWAQVLLLTVPWCIPAVAYTIDDHLSRFNEVRNWCE---IYRPIDTFTYILGSSLIASAFVLVYQMRKVRKQMNEYRLQVFQLAFLLLTGSVVFPLQHLLLDNKHGIRRIWVLYHNFLDSLVLFWPPIAEPMYRYLTGDVDYLNSYTQGFSTLPTPAQMKGSLRDQLSLDELRTEFQKFAENRMARELPEFYQACLDRDEIEDFFGRQAATTAIIDRFIRSGSEQELNISDRIRNKILLTEITSYNIFNEAMSVAVTMMDTNFSAAFKRSEAYKQLERNVRDEAEELERLRKMNQLPPKNHV 368          
BLAST of mRNA_Ecto-sp13_S_contig8059.19395.1 vs. uniprot
Match: D7G7J3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J3_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 6.170e-43
Identity = 104/322 (32.30%), Postives = 180/322 (55.90%), Query Frame = 0
Query:    3 LAQVYRNYKVLMLHTVDMLPPTVQILIVQAPMWVAAM-FLLIPSVASFDFEANRCKGKARYVLLGAFNYAGLLVIGSVYLLWKMRDARRQMTEYRAMMLSLGSLLLTLAAVNLTAGKIAEDDTLTRRIALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFEKIAQERLPPALPGFYKAVMDRDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEAVRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRKGVGFD 323
            L +VYR++K+L  H+VDM P   Q+ ++  P  V  + + + PS++ F+   N C      +    + Y G+ +IG+ +L ++MR  R+QM  YR  +L L  L +T   +     + +    + R   + +N+V  ++LFWP I  PL +    D+ Y   ++ G     TPA +R+ L DQL +++L   FEK A  ++   LP FYKA +DR+     F+RQA+T  I+D +I  +AV  V+++ A+R++IL +E+T Y IF EA + VL+++       F+ + A++ L +  +++  ++E L K N LP+ + V  D
Sbjct:   80 LVRVYRSWKILCRHSVDMWPAWAQVALLSIPWLVPVVAYSIKPSLSEFNELGNWCDINVA-IDTALYVYGGVPIIGAFFLSFQMRRVRKQMNFYRMQVLQLLFLFVT-GTIIFPLLEESLHSNIRRTWIMYDNIVSSIILFWPPIIEPLYRKLSGDEDYLYSYTKGFSQLPTPAQMRSCLKDQLSLEELRCEFEKFADSKVARELPDFYKACLDREDISDFFERQAVTTAIIDRFIRVDAVQEVNISGALRNKILTTEITSYNIFDEAMSAVLKIMDTNFSFEFKKTEAFKNLEQVVKEEAEELELLRKMNQLPEAEHVEPD 399          
BLAST of mRNA_Ecto-sp13_S_contig8059.19395.1 vs. uniprot
Match: A0A6H5KB09_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB09_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 5.880e-23
Identity = 80/244 (32.79%), Postives = 133/244 (54.51%), Query Frame = 0
Query:   43 IPSVASFDFEANRC--KGKARYVLLGAFNYAGLLVIGSVYLLW-----KMRDARRQMTEYRAMMLSLGSLLLTLAAVNLTA-GKIAEDDTLTRRIALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFEKIAQERLPPALPGFYKAVMDRDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEAVRDRILASEVTRYTIFSEAAAEVLEVLQ 278
            IP+   FD   N C     +  V+LG  N  G L+I   + LW     +++  R+Q  EY +M  +L  + +TLA+  +     +A++ T++RR AL   ++   +L W  I  P  K    +  Y   ++ G     +PA L+ASLA+QL VD+L   F +  + ++   L  F    +DR++    F+RQA+TM I+D YI + ++ +V+++ A  ++ILA++VT   IF EA AEVL V++
Sbjct:   95 IPNTGDFDEVENACFTLSVSTVVILG-MNGLGFLMI---FYLWFVCARQLKWVRKQFNEYDSMKRTLLYMTITLASYGVVVLFLLADNVTVSRRAALGYPVMTTYILLWVSIREPFMKKILGNDEYLGSYTHGFAQLPSPAQLKASLAEQLSVDQLRDEFRRYIKTKVAQELIDFNLDSLDREEMADFFERQAVTMRIVDQYIREGSIDQVNVSGAYWEKILATDVTAIDIFDEARAEVLVVME 334          
BLAST of mRNA_Ecto-sp13_S_contig8059.19395.1 vs. uniprot
Match: D7FIR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR9_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 3.280e-17
Identity = 64/232 (27.59%), Postives = 118/232 (50.86%), Query Frame = 0
Query:   84 KMRDARRQMTEYRAMMLSLGSLLLTLAAVNLTAGKIAEDD-TLTRRIALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFEKIAQERLPPALPGFYKAVMDRDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEAVRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLL 314
            +++  R+Q  EY +M  +L  + +TLA+  +    +  DD T++RR+AL   ++   +L W  I  P       D  Y   ++ G     +PA L+ASLA+QL V++L   F +  + ++   L  FY   +DR++    F+RQ                  V+++ A R++ILA++VT + IF EA AEVL V++   +  F  +  +  ++  +E+++ ++  L    +L
Sbjct:   44 QLKWVRKQFNEYESMKRTLLYMTITLASYGVVVLFLLADDLTVSRRVALFYPVMTTYILLWGSIREPFMMKILGDDEYLGSYTHGFAQLPSPAQLKASLAEQLSVEQLRDEFRRYIKTKVAQELIDFYLDSLDREEVTDFFERQ------------------VNVSGACREKILATDVTAFDIFEEARAEVLVVMETNFQSDFVTTEGFRRIMDASEKEQQELSLLRSGGML 257          
BLAST of mRNA_Ecto-sp13_S_contig8059.19395.1 vs. uniprot
Match: A0A6H5K1F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F7_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.120e-15
Identity = 61/191 (31.94%), Postives = 100/191 (52.36%), Query Frame = 0
Query:    3 LAQVYRNYKVLMLHTVDMLPPTVQILIVQAPMWV--AAMFLLIPSVASFDFEANRCKGKARYVLLGAFNYA--GLLVIGSVYLLWKMRDARRQMTEYRAMMLSLGSLLLTLAAVNLTAGKIAEDDTLTRRI-ALLNNMVRGLLLFWPVIFTPLCKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVD 188
            L +VYR++K+L+ H+VDM  P  Q+ ++  P W   A ++     +A F+   N C+    Y  + +F Y   GLL+ G+  L+++MR  R+QM EY   +  L  LL+T   V      I +     RRI  L +N+   L+LFWP I  P+ +Y   D+ Y   ++ G     TPA ++ S+ + + +D
Sbjct:  413 LVRVYRSWKILVKHSVDMWRPWAQVALLTLP-WCFPAVVYTTDEDLAPFNETRNWCES---YRPVQSFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNLFDSLVLFWPPIAEPMYRYLTGDEEYLHSYTHGFSTLPTPAQVQDSIPEHVVLD 599          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8059.19395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JMI3_9PHAE2.280e-22895.64RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FWB0_ECTSI1.240e-21192.75RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0B4_ECTSI9.970e-4733.85RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G7J3_ECTSI6.170e-4332.30RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB09_9PHAE5.880e-2332.79RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FIR9_ECTSI3.280e-1727.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1F7_9PHAE1.120e-1531.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 291..311
NoneNo IPR availableGENE3D1.20.58.1850coord: 173..301
e-value: 9.2E-11
score: 43.4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..345
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..154
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..94
NoneNo IPR availableTMHMMTMhelixcoord: 61..83
NoneNo IPR availableTMHMMTMhelixcoord: 129..151
NoneNo IPR availableTMHMMTMhelixcoord: 98..117
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
IPR016137RGS domainSMARTSM00315RGS_3coord: 180..295
e-value: 0.0088
score: 16.8
IPR016137RGS domainPFAMPF00615RGScoord: 189..294
e-value: 6.7E-8
score: 32.8
IPR016137RGS domainPROSITEPS50132RGScoord: 180..295
score: 9.847
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 180..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8059contigEcto-sp13_S_contig8059:71..5115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8059.19395.1mRNA_Ecto-sp13_S_contig8059.19395.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8059 71..5115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8059.19395.1 ID=prot_Ecto-sp13_S_contig8059.19395.1|Name=mRNA_Ecto-sp13_S_contig8059.19395.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
GFLAQVYRNYKVLMLHTVDMLPPTVQILIVQAPMWVAAMFLLIPSVASFD
FEANRCKGKARYVLLGAFNYAGLLVIGSVYLLWKMRDARRQMTEYRAMML
SLGSLLLTLAAVNLTAGKIAEDDTLTRRIALLNNMVRGLLLFWPVIFTPL
CKYAKRDQRYAERFSAGMRPSITPAMLRASLADQLKVDKLWALFEKIAQE
RLPPALPGFYKAVMDRDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEA
VRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQ
DEAQMEALDKANLLPKRKGVGFDFDETQTYNSRSDRWTNSTVAAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR036305RGS_sf