prot_Ecto-sp13_S_contig80576.19394.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80576.19394.1
Unique Nameprot_Ecto-sp13_S_contig80576.19394.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length41
Homology
BLAST of mRNA_Ecto-sp13_S_contig80576.19394.1 vs. uniprot
Match: A0A6H5LEF6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEF6_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.110e-20
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
Query:    1 GWDSTRNNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQV 41
            GWDSTR+NTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQV
Sbjct:   14 GWDSTRDNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQV 54          
BLAST of mRNA_Ecto-sp13_S_contig80576.19394.1 vs. uniprot
Match: A0A7S2R5M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5M2_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.230e-8
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 GWDSTRNNTR-IKEYNALFDPNMRHFFETPSVQAHLLRTGQV 41
            GWD T   T  + +YNAL+DPNMRHFFE  ++Q HL RTGQ+
Sbjct:   17 GWDLTSCRTASLPDYNALYDPNMRHFFENQTIQRHLHRTGQI 58          
BLAST of mRNA_Ecto-sp13_S_contig80576.19394.1 vs. uniprot
Match: A0A835YVA2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVA2_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.540e-8
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    2 WDST--RNNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQV 41
            WD     +N R+ EYNAL+D NMRHFFE  S Q+HLL+TGQ+
Sbjct:  382 WDGRCCTSNERLPEYNALYDVNMRHFFENTSTQSHLLKTGQI 423          
BLAST of mRNA_Ecto-sp13_S_contig80576.19394.1 vs. uniprot
Match: A0A6T7GC98_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7GC98_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.360e-7
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 GWD-STRNNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQV 41
            GWD S+     +  YNAL+DPNMRH+FE  ++Q+HL +TGQ+
Sbjct:   18 GWDLSSCRTATMPSYNALYDPNMRHYFENTTIQSHLYKTGQI 59          
BLAST of mRNA_Ecto-sp13_S_contig80576.19394.1 vs. uniprot
Match: A0A7S4EDV9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDV9_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 7.630e-6
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0
Query:   11 IKEYNALFDPNMRHFFETPSVQAHLLRTGQV 41
            +  Y+AL DPNMRH+FE  SVQAHL +TGQ+
Sbjct:   23 LSSYDALRDPNMRHYFENRSVQAHLYKTGQI 53          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80576.19394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5LEF6_9PHAE1.110e-2097.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2R5M2_9STRA1.230e-859.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YVA2_9STRA4.540e-859.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6T7GC98_9STRA1.360e-752.38Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4EDV9_9STRA7.630e-664.52Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80576contigEcto-sp13_S_contig80576:3..125 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80576.19394.1mRNA_Ecto-sp13_S_contig80576.19394.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80576 3..125 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80576.19394.1 ID=prot_Ecto-sp13_S_contig80576.19394.1|Name=mRNA_Ecto-sp13_S_contig80576.19394.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=41bp
GWDSTRNNTRIKEYNALFDPNMRHFFETPSVQAHLLRTGQV
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