prot_Ecto-sp13_S_contig8056.19393.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8056.19393.1
Unique Nameprot_Ecto-sp13_S_contig8056.19393.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length331
Homology
BLAST of mRNA_Ecto-sp13_S_contig8056.19393.1 vs. uniprot
Match: D7FYI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI9_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 1.210e-99
Identity = 259/358 (72.35%), Postives = 262/358 (73.18%), Query Frame = 0
Query:    5 PGAATDNGEEEIAHLIKKCEWCAATKAKLRQCFMKAHAQVLRSVRVSRDGEHFVCFATGKVFLRKSPEFKKFYMRLKPGTRIMAWKASSSSSSSSELQISEVPWADLAGLSSIALAAGTVLERPSPARPVASWLCVPGASNVGEEIVPARGSGRAPRGPLDDGGGDDNEPSRRRVVRPGWVWIQEXXXXXXXXXXXXXXXXXXXXXXXXXADEKRGKGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SRRSGAGVRVSPVGSGGRLGEDDSAGGNGE----------------------------ARGSSEGPPSMSDLATKDEVQQALAWKLRACDE 331
            PGAATD+GEEEIAHLIKKCEWCA TKAKLRQCFMKAHAQVLRSVRVSRDGEHFVC ATGKVF RKS +FKKFYMRLKPGT                                          RPSPARPVA WLCVPGASNVGEE VPARGSGRAPRGP DDG GD +EPSRR  VRPGWVWIQE XXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SRRSGAGVRVSPVGSGGRLGED SAGGNGE                            ARGSSEGPPSMSDLATKDEVQQALAWKLRACDE
Sbjct:   39 PGAATDDGEEEIAHLIKKCEWCATTKAKLRQCFMKAHAQVLRSVRVSRDGEHFVCLATGKVFPRKSQDFKKFYMRLKPGT------------------------------------------RPSPARPVAGWLCVPGASNVGEETVPARGSGRAPRGPPDDGDGDGDEPSRR-AVRPGWVWIQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRSGAGVRVSPVGSGGRLGEDSSAGGNGERKAAKPSTAKNRGGVAARVGAPPPGEEEARGSSEGPPSMSDLATKDEVQQALAWKLRACDE 353          
BLAST of mRNA_Ecto-sp13_S_contig8056.19393.1 vs. uniprot
Match: A0A6H5KZY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY4_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 1.090e-94
Identity = 286/499 (57.31%), Postives = 290/499 (58.12%), Query Frame = 0
Query:    5 PGAATDNGEEEIAHLIKKCEWCAATKAKLRQCFMKAHAQVLRSVRVSRDGEHFVCFATGKVFLRKSPEFKKFYMRLKPGTRIMAWKASSSSSSSSELQISEVPWADLAGLSSIALAAGTVLERPSPARPVASWLCVPGASNVGEEIVPARGSGRAPRGPLDDGGGDDNEPSRRRVVRPGWVWIQEXXXXXXXXXXXXXXXXXXXXXXXXX----------------------ADEKRGKGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------------SRRSGAGVRVSPVGSGGRLGEDDSAGGNGEARGSSEGPPSMSDLATKDEVQQALAWKLRACDE 331
            PG ATDN EEEIAHLIKKC+WCAATK KLRQCFMKAHAQVLRSVRVSRDGEHFV  ATGKV  RKS EFKKFYMRLKPGT                  ISEVPWADLAGLSSIALAAGTVLERPSPARPVASWLCVPGASNVGEEIVPARGSGRAPRGP DDG GDD+EPSRR VVRPGWVWIQE XXXXXXXXXXXXXXXXXXXXXXXX                      +  KR +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                                                                      SRRSGAGVRVSPVGSGGRLGEDDSA GNGEARGSSEGPPSMSDLATKDEVQQALAWKLRACDE
Sbjct:   39 PGPATDNSEEEIAHLIKKCDWCAATKGKLRQCFMKAHAQVLRSVRVSRDGEHFVGLATGKVLPRKSQEFKKFYMRLKPGT------------------ISEVPWADLAGLSSIALAAGTVLERPSPARPVASWLCVPGASNVGEEIVPARGSGRAPRGPPDDGDGDDDEPSRR-VVRPGWVWIQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSSTKRKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAGGPREEGXXXXXXXXXXXXXSRRSGAGVRVSPVGSGGRLGEDDSAWGNGEARGSSEGPPSMSDLATKDEVQQALAWKLRACDE 518          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8056.19393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYI9_ECTSI1.210e-9972.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZY4_9PHAE1.090e-9457.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8056contigEcto-sp13_S_contig8056:246..6660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8056.19393.1mRNA_Ecto-sp13_S_contig8056.19393.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8056 246..6660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8056.19393.1 ID=prot_Ecto-sp13_S_contig8056.19393.1|Name=mRNA_Ecto-sp13_S_contig8056.19393.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=331bp
LRAPPGAATDNGEEEIAHLIKKCEWCAATKAKLRQCFMKAHAQVLRSVRV
SRDGEHFVCFATGKVFLRKSPEFKKFYMRLKPGTRIMAWKASSSSSSSSE
LQISEVPWADLAGLSSIALAAGTVLERPSPARPVASWLCVPGASNVGEEI
VPARGSGRAPRGPLDDGGGDDNEPSRRRVVRPGWVWIQEDDDEDEDGNGG
GGGAIATERAGAGAADEKRGKGEAAAAATAAAAGAASSSSTKRKRSSAGG
PSEEGGAGGGAAAAKRRKSRRSGAGVRVSPVGSGGRLGEDDSAGGNGEAR
GSSEGPPSMSDLATKDEVQQALAWKLRACDE
back to top