prot_Ecto-sp13_S_contig8053.19388.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8053.19388.1 vs. uniprot
Match: A0A6H5K714_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K714_9PHAE) HSP 1 Score: 650 bits (1678), Expect = 5.170e-218 Identity = 476/636 (74.84%), Postives = 480/636 (75.47%), Query Frame = 0
Query: 1 SDKGEIAKHRKQLDDFHDKLKAKQDAEKKAKAEAADAEKRRRDLARAQSR---------------------------------------------------------------------------------------------ATSGAAA----GGAARSFVGRKLAGRGPGGRRRRPAAADSGTPAERGTGEGDRGXXXXXXXXXXXXXXXXXXXGGSGGILKVTAVPTAATAGGQDEXXXXXXXXXXXXXXXXXAVGGAEGESAXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSKSKSDHGRASAGDEXXXXXXXXXXXXXXXXXXXXXXX---KPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVPALQASPQYAPGPPQQ 536
SDKGEIAKHRKQLDD HDKLKAKQDAEKKAKAE ADAEKRRRDLARAQSR + +GAAA GGAAR FVGRKLAGRGPGGR RRP A SGTPA +GTG+GDRGXXXXXXXXXXXX XXXXX ILKVTAV TAATAGGQD XXXXXXXXXXXX XXXXXXXXXXX GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSK KSDHGRASAGDE XXXXXXXXXXXXXXXXXXXXXX KPMVT VPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEA KEQQQQQ PANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVP LQASP YAPGPPQQ
Sbjct: 274 SDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAELADAEKRRRDLARAQSRPPNGVGGSPITAPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAKGVSAASKPGRDPPAAAADSSGAPGTGSXXXXXXXXXXXXXXXXXXXXSETGAAAXXXXGGAARYFVGRKLAGRGPGGRVRRPTVAFSGTPAGQGTGKGDRGXXXXXXXXXXXXAGXXXXXXXXXXILKVTAVSTAATAGGQDGTAAGGXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXTAASAPAASRSAGIGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSKGKSDHGRASAGDEEXXXXXXXXXXXXXXXXXXXXXXXKRKPMVTAVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEALKEQQQQQAPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVPTLQASPSYAPGPPQQ 908
BLAST of mRNA_Ecto-sp13_S_contig8053.19388.1 vs. uniprot
Match: D8LNV8_ECTSI (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV8_ECTSI) HSP 1 Score: 506 bits (1303), Expect = 1.920e-169 Identity = 383/541 (70.79%), Postives = 385/541 (71.16%), Query Frame = 0
Query: 1 SDKGEIAKHRKQLDDFHDKLKAKQDAEKKAKAEAADAEKRRRDLARAQSRATSGAAAGGAARSFVGRKLAGRGPGGRRRRPAAADSGTPAERGTGEGDRGXXXXXXXXXXXXXXXXXXXGGSGGILKVTAVPTAATAGGQDEXXXXXXXXXXXXXXXXXAVGGA---EGESAXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQ---------------------VVKEFHSEDAATAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSKSKSDHGRASAGDEXXXXXXXXXXXXXXXXXXXXXXX-----KPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ 503
SDKGEIAKHRKQLDD HDKLKAKQDAEKKAKAEAADA+KRRRDLAR VTAVPTAATAGGQD A GGA +GE XXXXXXXXXXXXXXXXXXXXXXXXXXX GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQ VVKEFHSEDAATAVSETPQESDSV A TMASHHAGHRHWAERVKREREMERKFHGKSGGRSK XXXXXXXXXXXXXXXXXXXXXXX KPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ
Sbjct: 223 SDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAEAADADKRRRDLAR---------------------------------------------------------------------------------VTAVPTAATAGGQD----------------GTADGGAAATDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQESVEGRRLMLMNHPGTRRALQVVKEFHSEDAATAVSETPQESDSVAATTMASHHAGHRHWAERVKREREMERKFHGKSGGRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKRKPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ 666 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8053.19388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig8053.19388.1 ID=prot_Ecto-sp13_S_contig8053.19388.1|Name=mRNA_Ecto-sp13_S_contig8053.19388.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=595bpback to top |