mRNA_Ecto-sp13_S_contig804.19370.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig804.19370.1
Unique NamemRNA_Ecto-sp13_S_contig804.19370.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: A0A6H5JFN4_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN4_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 1.300e-141
Identity = 222/254 (87.40%), Postives = 228/254 (89.76%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTEKVRRSGLRLKSREEGRHLFHLPALLFSPYNCTMQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAGTRSLGTVTGIINGSGSIVAAVG 762
            TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIY+FLPPHPEEIGLESPKDTEK    G   + R +G                 ++AFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHF+PSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAGTRSLGTVTGIINGSGSIVAAVG
Sbjct:  165 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYMFLPPHPEEIGLESPKDTEKREAGGDVNEGRTDGEETA----------ISIVEAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFSPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAGTRSLGTVTGIINGSGSIVAAVG 408          
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: A0A835YZT8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZT8_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.920e-89
Identity = 155/255 (60.78%), Postives = 187/255 (73.33%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTEKVRRSGLRLKSREEGRHLFHLPALLFSPYNCTMQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAGT-RSLGTVTGIINGSGSIVAAVG 762
            TCHQY+GNIIAA+ ATA+L+ +G +Y+W L+I A AN  WG+ + + LP  P E+G+E   D  KV    +  K  ++      LP + F      +QAF IPAVA YA+AFGFFK  NY LFFWLPFFLT  F PS+SN+ISTLYD+GMMPGGIIVG VSD +GGRRACVIVTFL LLC LL VF++ SD +    LLVLLG MG+LVGGPNNIISSAVA DLA HP + G  R++GTVTGIINGSGS+ AA+G
Sbjct:  166 TCHQYMGNIIAAITATAILA-QGFAYWWVLVISAVANLAWGVFLLMALPSRPAEVGIEFG-DAPKVAVGEVVNKDTKQ------LPPISF------VQAFQIPAVAMYALAFGFFKLVNYVLFFWLPFFLTRTFTPSQSNVISTLYDVGMMPGGIIVGYVSDLYGGRRACVIVTFLLLLCPLLYVFSQYSDVIPVYALLVLLGFMGILVGGPNNIISSAVAADLADHPSIQGNNRAIGTVTGIINGSGSVTAAIG 406          
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: H6WBB5_VAULI (MFS domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB5_VAULI)

HSP 1 Score: 264 bits (675), Expect = 1.670e-82
Identity = 149/255 (58.43%), Postives = 183/255 (71.76%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTEKVRRSGLRLKSREEGRHLFHLPALLFSPYNCTMQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLA-GTRSLGTVTGIINGSGSIVAAVG 762
            TCHQYVGNIIAA+V + VL    ++Y+W+L+  A AN +WG +IY++LP  P E  ++  KD + +  +       E G       A+ F      + A  IPAVA YA+AFGFFK  NY LFFWLP+FLT  F PS S  ISTLYD+GMMPGGIIVGVVSD +GGRRACVIV+FL +LC LL +F++ SD M    +L+LLG+MG+LVGGPNNIISSAVA DL+ +PKLA  TRSLGTVTGIINGSGSI AA+G
Sbjct:  172 TCHQYVGNIIAAIVTSLVLISP-IAYWWSLVFSAIANFVWGALIYLYLPAKPSECAIQ--KDNDDMFDNDF--DEDENG------SAISF------IDAIKIPAVALYALAFGFFKLVNYVLFFWLPYFLTRIFTPSTSTFISTLYDVGMMPGGIIVGVVSDLYGGRRACVIVSFLLMLCPLLFLFSKYSDVMPMPVMLILLGIMGILVGGPNNIISSAVAADLSSNPKLAHNTRSLGTVTGIINGSGSITAAIG 409          
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: A0A7S0LK54_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LK54_9EUKA)

HSP 1 Score: 259 bits (662), Expect = 5.620e-81
Identity = 148/255 (58.04%), Postives = 179/255 (70.20%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTEKVRRSGLRLKSREEGRHLFHLPALLFSPYNCTMQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAG-TRSLGTVTGIINGSGSIVAAVG 762
            TCHQY+G+I+AAL ATA +   G+++ WAL++P   N +WG+V  + LP +P+E+GLE  K+ EK   SG+   S   G   F             +QAF IP V  YA+AFGFFKF NYA+FFWLPFFL+ HF+   +NLIS+LY +GMMPGG+IVG VSD + GRRACVI TF+ LL  LL VFA  SD M    LL LLGLMG+LVGGPNNII+SAVA DLA HP + G TRSL TVTGIINGSGSI AA G
Sbjct:  177 TCHQYIGDIVAAL-ATAAIINAGLAWQWALLLPGVLNGVWGIVNVMVLPNNPQEVGLE--KEEEKAGTSGV--ASSGGGTVGF-------------VQAFKIPNVMGYALAFGFFKFVNYAMFFWLPFFLSLHFDSQSANLISSLYSVGMMPGGVIVGWVSDLYDGRRACVIATFMMLLAPLLWVFAMFSDTMPPMLLLGLLGLMGILVGGPNNIITSAVAADLAEHPSIGGNTRSLSTVTGIINGSGSITAAFG 413          
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: B8C1V2_THAPS (MFS domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1V2_THAPS)

HSP 1 Score: 257 bits (657), Expect = 5.280e-80
Identity = 141/256 (55.08%), Postives = 182/256 (71.09%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTEKVRRSGLRLKSREEGRHLFHLPALLFSPYNCT-MQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAGT-RSLGTVTGIINGSGSIVAAVG 762
            TCHQY+G+I AA+  TA++   G+ Y+WAL+IPA  N  WG +    + P P ++G+ +P+   ++R   L  K  E+G H+         P   T M A  IP VA YA AFGFFK TNY LFFWLP+FL  HF+P  +NLI++LY +GMMPGGIIVGVVSD FGGRRA VI  F+SLL V L +F++KS+++ A PLLV+LG+MG+LVGGPNNII+SAVA DLA HP + G  +SLGTVTG+ING GSI A++G
Sbjct:  177 TCHQYMGDITAAI-CTAIVLGAGLPYWWALLIPAVCNFSWGFLTMRLI-PDPADMGIITPE--VRIRMEKLAAKRAEQGSHVVDE-----GPAPITYMNALRIPMVAQYAFAFGFFKLTNYVLFFWLPYFLGKHFDPVTANLIASLYSVGMMPGGIIVGVVSDLFGGRRASVIGVFMSLLFVFLFIFSQKSEELTAIPLLVMLGIMGILVGGPNNIITSAVAADLASHPSVRGNNKSLGTVTGLINGCGSITASIG 423          
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: A0A8J5XS52_DIALT (MFS domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XS52_DIALT)

HSP 1 Score: 254 bits (649), Expect = 7.300e-79
Identity = 144/258 (55.81%), Postives = 179/258 (69.38%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTE---KVRRSGLRLKSREEGRHLFHLPALLFSPYNCTMQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAG-TRSLGTVTGIINGSGSIVAAVG 762
            TCHQY+G+IIAAL ATA +   G  + WAL++P  AN +WGLV   FLP  P ++G+E+ +D +   ++  SG     ++E         + F      MQA  IP V  YAIAFGFFK  NYA FFWLPFFL+ +F+P  +N+IS+LY +GMMPGG+IVG VSD + GRRACVI TF+ LL  LL VFA  S+ M    LL+LLG+MG+LVGGPNNII+SAVA DLA HP + G TR LGTVTGIINGSGSI AA+G
Sbjct:  164 TCHQYIGDIIAAL-ATAFIITHGWPWQWALLVPGVANGLWGLVNLFFLPNRPADVGIETEEDKKANAQLVSSGGVAGGKQE--------TIGF------MQALMIPNVLGYAIAFGFFKLVNYACFFWLPFFLSQNFDPQSANVISSLYSVGMMPGGVIVGFVSDLYDGRRACVIATFMCLLAPLLWVFAMFSNTMPPTALLILLGVMGILVGGPNNIITSAVAADLADHPSIGGNTRVLGTVTGIINGSGSITAALG 406          
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: A0A7S0P0T3_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P0T3_9EUKA)

HSP 1 Score: 253 bits (645), Expect = 2.110e-78
Identity = 143/255 (56.08%), Postives = 175/255 (68.63%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTEKVRRSGLRLKSREEGRHLFHLPALLFSPYNCTMQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAG-TRSLGTVTGIINGSGSIVAAVG 762
            TCHQY+G+I+AAL ATA +   G+++ WAL++P   N +WG++  + LP  P E+GL   K+ EK   +     + E G   F             +QAF IP V  YA+AFGFFKF NYA+FFWLPFFL+ HF+   +NLIS+LY +GMMPGG+IVG VSD + GRRACVI TF+ LL  LL VFA  SD M    LL LLG+MG+LVGGPNNII+SAVA DLA HP + G TRSL TVTGIINGSGSI AA G
Sbjct:  181 TCHQYIGDIVAAL-ATAAIINAGLAWQWALLLPGVLNGVWGVINVLLLPNKPSELGLA--KEDEKTANAA----AGEGGTVGF-------------VQAFKIPNVMGYALAFGFFKFVNYAMFFWLPFFLSLHFDAQSANLISSLYSVGMMPGGVIVGWVSDLYDGRRACVIATFMLLLAPLLWVFAMFSDSMPPMLLLALLGVMGILVGGPNNIITSAVAADLAEHPSIGGNTRSLSTVTGIINGSGSITAAFG 415          
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: A0A7S2N9V8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N9V8_9EUKA)

HSP 1 Score: 248 bits (632), Expect = 4.250e-77
Identity = 145/255 (56.86%), Postives = 174/255 (68.24%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTEKVRRSGLRLKSREEGRHLFHLPALLFSPYNCTMQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAG-TRSLGTVTGIINGSGSIVAAVG 762
            TCHQYVG+II+ L ATA +   G  + +AL +P   + +WG+V + FLP  P E+GL+S +D +K   SG    S+  G   F             MQA  IP V  YA+AFGFFKF NYA+FFWLPFFL+ HF+   +N+IS+LY  GMMPGG+IVG VSD FGGRRACVI  F++LL  LL VFA  S  M    LLVLL LMG+LVGGPNNII+SAVA DLA HP + G TRSLGTVTGIINGSGSI A+ G
Sbjct:  130 TCHQYVGDIISGL-ATAAIINAGFDWRYALTVPGLLSGVWGVVNFYFLPNSPAEVGLQS-EDDKKAEASGT---SKGGGTIGF-------------MQALQIPNVIGYALAFGFFKFVNYAMFFWLPFFLSIHFDTQSANIISSLYSFGMMPGGVIVGWVSDLFGGRRACVIAVFMTLLAPLLWVFAVFSGTMNPILLLVLLCLMGILVGGPNNIITSAVAADLAEHPSIGGNTRSLGTVTGIINGSGSITASFG 366          
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: A0A7S2A7M9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7M9_TRICV)

HSP 1 Score: 239 bits (609), Expect = 2.590e-74
Identity = 139/257 (54.09%), Postives = 176/257 (68.48%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTEKVRRSGLRLKSRE--EGRHLFHLPALLFSPYNCTMQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAGT-RSLGTVTGIINGSGSIVAAVG 762
            TCHQY G++ AAL  TA + + G+ Y+W L+IP+  N +WG V+ + L   P ++G+ +  +  ++R+  L  K  E  EG  L        S  N    A  IP VA YA AFGFFK TNY LFFWLP+FL  HF+P  +NLI+ +Y +GMMPGGIIVGVVSD FGGRRACVI TF+ LL V L VFA  S+ +AA PLL++L  MG+LVGGPNNII+SAVA DLA HP + G  +SLGTVTG+ING GSI A++G
Sbjct:   45 TCHQYCGDVTAAL-CTAWVLKIGLPYWWGLLIPSVTNILWG-VLTLQLIADPADVGIIT--EEVRIRQEKLAAKRAELAEGEVLEDTGPQAISWAN----ALRIPMVAQYATAFGFFKLTNYVLFFWLPYFLGKHFDPVTANLIAAIYSVGMMPGGIIVGVVSDWFGGRRACVIGTFMGLLLVFLFVFALFSEVLAAVPLLIMLFTMGILVGGPNNIITSAVAADLASHPSVRGNNKSLGTVTGLINGCGSITASIG 293          
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Match: A0A1E7FBP3_9STRA (MFS general substrate transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBP3_9STRA)

HSP 1 Score: 241 bits (616), Expect = 6.350e-74
Identity = 137/257 (53.31%), Postives = 178/257 (69.26%), Query Frame = 1
Query:    1 TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPPHPEEIGLESPKDTEKVRRSGLRLKSREEGRHLFHLPALLFSPYNCTMQAFTIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGMMPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAE--KSDDMAAGPLLVLLGLMGVLVGGPNNIISSAVAVDLAGHPKLAGT-RSLGTVTGIINGSGSIVAAVG 762
            TCHQY+G+I AAL+ TA +   G +Y+WAL++PA  N +W  V  I L   P ++G+ +P+   K+R++    K RE       + A         M AF IP VA+YAIAFGFFK TNY LFFWLP+FL  +F+P ++NLI++LY +GMMPGGIIVG+VSD FGGRRA VI  F+  L VLL VFA+  +SD+M    LLV+L  MG+LVGGPNNII+SAVA DL+ HP + G+ +SLGTVTGIING G  +A +G
Sbjct:  171 TCHQYMGDICAALI-TAWILGSGAAYWWALVVPAILNILWAFVT-IQLVADPYDMGIITPE--VKIRQAKFEAKKREMAEQGKSIEADTGPQAIAFMDAFKIPMVANYAIAFGFFKLTNYVLFFWLPYFLGKNFDPVKANLIASLYSVGMMPGGIIVGIVSDFFGGRRALVIGVFMGFLIVLLAVFAKLSESDNMDPTTLLVMLACMGILVGGPNNIITSAVAADLSSHPSVRGSSKSLGTVTGIINGCGGFIAGLG 423          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig804.19370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFN4_9PHAE1.300e-14187.40MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YZT8_9STRA1.920e-8960.78Major facilitator superfamily domain-containing pr... [more]
H6WBB5_VAULI1.670e-8258.43MFS domain-containing protein n=1 Tax=Vaucheria li... [more]
A0A7S0LK54_9EUKA5.620e-8158.04Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
B8C1V2_THAPS5.280e-8055.08MFS domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A8J5XS52_DIALT7.300e-7955.81MFS domain-containing protein n=1 Tax=Diacronema l... [more]
A0A7S0P0T3_9EUKA2.110e-7856.08Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A7S2N9V8_9EUKA4.250e-7756.86Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S2A7M9_TRICV2.590e-7454.09Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1E7FBP3_9STRA6.350e-7453.31MFS general substrate transporter n=1 Tax=Fragilar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig804contigEcto-sp13_S_contig804:16953..18925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score257.7
Seed ortholog evalue5.7e-66
Seed eggNOG ortholog35128.Thaps22565
Model size762
KEGG koko:K03447,ko:K13783
KEGG TC2.A.1.4
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.Major Facilitator Superfamily
EggNOG OGs2XAF1@2836,COG0477@1,KOG2533@2759
Cds size762
COG Functional cat.G
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464077.1686141-CDS-Ecto-sp13_S_contig804:16952..171781681464077.1686141-CDS-Ecto-sp13_S_contig804:16952..17178Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig804 16953..17178 +
1681464077.1889782-CDS-Ecto-sp13_S_contig804:17874..181051681464077.1889782-CDS-Ecto-sp13_S_contig804:17874..18105Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig804 17875..18105 +
1681464077.2072132-CDS-Ecto-sp13_S_contig804:18326..185011681464077.2072132-CDS-Ecto-sp13_S_contig804:18326..18501Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig804 18327..18501 +
1681464077.2219262-CDS-Ecto-sp13_S_contig804:18795..189251681464077.2219262-CDS-Ecto-sp13_S_contig804:18795..18925Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig804 18796..18925 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig804.19370.1prot_Ecto-sp13_S_contig804.19370.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig804 16953..18925 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig804.19370.1

>prot_Ecto-sp13_S_contig804.19370.1 ID=prot_Ecto-sp13_S_contig804.19370.1|Name=mRNA_Ecto-sp13_S_contig804.19370.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
TCHQYVGNIIAALVATAVLSREGVSYYWALIIPAAANAIWGLVIYIFLPP
HPEEIGLESPKDTEKVRRSGLRLKSREEGRHLFHLPALLFSPYNCTMQAF
TIPAVASYAIAFGFFKFTNYALFFWLPFFLTSHFNPSESNLISTLYDIGM
MPGGIIVGVVSDAFGGRRACVIVTFLSLLCVLLVVFAEKSDDMAAGPLLV
LLGLMGVLVGGPNNIISSAVAVDLAGHPKLAGTRSLGTVTGIINGSGSIV
AAVG
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mRNA from alignment at Ecto-sp13_S_contig804:16953..18925+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig804.19370.1 ID=mRNA_Ecto-sp13_S_contig804.19370.1|Name=mRNA_Ecto-sp13_S_contig804.19370.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1973bp|location=Sequence derived from alignment at Ecto-sp13_S_contig804:16953..18925+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACCTGCCACCAGTACGTGGGCAACATCATCGCTGCACTCGTGGCTACGGC AGTCCTCTCCCGAGAAGGCGTGTCGTATTACTGGGCCCTCATCATCCCCG CCGCCGCCAACGCCATCTGGGGGCTCGTGATCTACATCTTCTTGCCGCCC CACCCGGAGGAGATCGGCCTCGAGTCACCCAAGGACACCGAAAAGGTAAG ACGTTCGGGGTTGCGCTTGAAATCCCGTTTTTGATATTTGGCAGGGGAAG ACATGCAGACAAGGCGTGTGTACGTTTGTGTTGTACGATGGGGTCGATTA GAATGTTTGGGGTGTAGGAATGGCGACATGGTCTGTCTACGAGCTGCGAC GGAACTCGTGTGCTAGAGCGGCTGTCCTCAAGGATACATCAGCTATGCAG CGGCTGTCCTCAACGCCGTCCCAAAATATACTGTTCCATGCACGTTTTGT GTGTGGCCTTCTCACTTTCCTTCTCTCCAAATATGGCCCGTGCAGCGGGA CGCCGGTGGCGATGTAAACGAAGGCAGGACTGACGGCGAGGAGACTGCCA TCTCCATCGTTGAGGTACGCGTGGCAGCTCCAGAGTCTGATCTTGACTTG ACTGGTGACTTCCAAACTATTGCCGTTTTCCTCCCCTCCGCTTTGAATCA ACCCCTCTCCCTCTTCCAGTCCGTGGATCTCTGCGTATTTCCACGATTTG GCTCTACTTTTGACGCGTCTTGAGGTGCACAGTTTCGTAACCCCTCCGCA TCGCCGTGTGGGCAAAGTCCTTTCGTTCGGTTTTAGTCATTCTGTTGGCG AAGTTTTCTGATCATTATCCTTAGTTTATATGGTCACCTACTCTTGGTTC TGCGCATCAATCATGTCGAGCACCTCCAAGTCGGTCATATGCACACACTG AACGCTCTCCTCTTTTTTTCAGGCGAAGAAGGGCGACATTTATTTCACCT TCCCGCTCTTTTATTTTCCCCATACAACTGCACCATGCAGGCATTCACTA TCCCTGCCGTGGCTTCTTACGCCATTGCCTTCGGCTTCTTCAAGTTCACC AATTACGCCCTGTTCTTCTGGCTGCCTTTCTTCCTCACCAGCCACTTCAA CCCCTCGGAAAGTAACCTCATCTCCACGCTGTACGACATCGGCATGATGC CAGGTGGGGTGTCTTACGCCGGCAAAGGTTCTCGTGGTTCTCGTACCCGC TGTATTTCCTGCAGGATACTCTCACCTGTGTGCCATAGGTGATTTACTCT TCAGTGTGGGAGCATTGTCAACGGCGACACATACCGCCAAGCACATATCT TCGAATGGCTAGCTCGTGCTGTGACGCGCGTTCAACACCACCTAAGGCGC TTCAGTGCCGTGCTTATGTTTCAGGTGGCATCATCGTGGGCGTCGTGAGC GACGCATTCGGCGGCAGGCGCGCCTGTGTTATCGTGACCTTCCTCTCCCT GCTGTGCGTGCTGCTGGTCGTCTTCGCCGAGAAGTCCGACGACATGGCGG CCGGGCCACTCCTCGTGCTTCTCGGCCTCATGGGCGTGCTCGTGGGAGGG TGAGTTGATTACACGCCCAGGGTAAAAGGCGTGGGCTGGAGAGGCACTAA GAGTAATCCGGGTTGACTCGAAATTTCGATGGGCTTCTTTTCGTCATGTA TGCTCTCTCCCGTGTTCGTTTAGACGCTTGTGCAAGCGGCGAGCTTGCTC TAGGTGCAGAGTGCCACATACATGCCCCGAGAGTTCCGCCCAAGACAACC TTTCGTTCGCCGCAGTCTTTTGACAGTTTCGCTGGCCCCCGTGCCCCCCT TCAGCGTCAGTCTCAATCTCTATGGCCTTCTTAACACAATCAGGCCCAAC AACATTATCTCTTCGGCCGTGGCGGTCGATCTTGCCGGACACCCCAAGCT TGCGGGCACGCGTTCCTTGGGCACGGTGACTGGGATCATCAACGGGTCTG GATCTATTGTCGCCGCCGTGGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig804:16953..18925+

>mRNA_Ecto-sp13_S_contig804.19370.1 ID=mRNA_Ecto-sp13_S_contig804.19370.1|Name=mRNA_Ecto-sp13_S_contig804.19370.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig804:16953..18925+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACCTGCCACCAGTACGTGGGCAACATCATCGCTGCACTCGTGGCTACGGC
AGTCCTCTCCCGAGAAGGCGTGTCGTATTACTGGGCCCTCATCATCCCCG
CCGCCGCCAACGCCATCTGGGGGCTCGTGATCTACATCTTCTTGCCGCCC
CACCCGGAGGAGATCGGCCTCGAGTCACCCAAGGACACCGAAAAGGTAAG
ACGTTCGGGGTTGCGCTTGAAATCCCGCGAAGAAGGGCGACATTTATTTC
ACCTTCCCGCTCTTTTATTTTCCCCATACAACTGCACCATGCAGGCATTC
ACTATCCCTGCCGTGGCTTCTTACGCCATTGCCTTCGGCTTCTTCAAGTT
CACCAATTACGCCCTGTTCTTCTGGCTGCCTTTCTTCCTCACCAGCCACT
TCAACCCCTCGGAAAGTAACCTCATCTCCACGCTGTACGACATCGGCATG
ATGCCAGGTGGCATCATCGTGGGCGTCGTGAGCGACGCATTCGGCGGCAG
GCGCGCCTGTGTTATCGTGACCTTCCTCTCCCTGCTGTGCGTGCTGCTGG
TCGTCTTCGCCGAGAAGTCCGACGACATGGCGGCCGGGCCACTCCTCGTG
CTTCTCGGCCTCATGGGCGTGCTCGTGGGAGGGCCCAACAACATTATCTC
TTCGGCCGTGGCGGTCGATCTTGCCGGACACCCCAAGCTTGCGGGCACGC
GTTCCTTGGGCACGGTGACTGGGATCATCAACGGGTCTGGATCTATTGTC
GCCGCCGTGGGT
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